G156399 (LOC107707753,LOC107672006,LOC107603149)


Basic Information

Item Value
gene id G156399
gene name LOC107707753,LOC107672006,LOC107603149
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10563344 ~ 10572246 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231625
TGTTACTCTTCCTCGGTTCAGTTTGCTCTACAGCCTGTTTTTCCATCTCTGTCACCGTCGCCTTGTACAATATTTTCTCTGTTAAAGCAGCCAAGAATAATTGTGTAAGATTTGAAAAAGAGGAGGAGGCggtgGAGGTAGACAGAAAGGCAGCGGCATGATTTCAAGGGACAGAAGAGAAAACAGTATGTGAGACACAAATTACTACAACAGTGATCATCCGTCTGATTATCTGGTACACTGTTGACTGGCAAATCAATCCAGCTGTCACATTTACACAAAGCATAAATATTCACATGAATTTATGAATTGGTGTTGATTTTTGAAATGGTGGTATTGGTGAAATCTTAACCCTGAACCACAAATCCACATGTATGCATTGACCTttggacagacagaaataatCATAATCACAATCAAGTATACTTCAAGTAATTGCTTATAAAGTGAATTATAGTGCAATCGACATGTCATTAAATGCCACCCGTCACCTgtcagtcaaataaataaacatcatagGGTACATAAAGTCATTGCCAAATGTTTGGAAAAAGCTGAAAGCAGAAGATTCTAACTGAATTTTGTTTCTGCATGcagtaaatatgtaatttattttcactgttttaaatTTCAAGCTTAGATAGTTCATCAATTTGTATATTCCACTTTTTTAACCAAGTAACagaatgcaaaattaattttttagtGGAATTACATTGCATGGTATTTCAGAAATAACACAATAACTAACATTGAATAACATTAGTACTTATAGTTTTGTTTAGCAGGGTGTAATACTAAATTAAGTTCAGCTGTTTTCTTATTCAGGCTGTAATTATTTAACCTAGACTAACATGAAAATTAGACCTATTAGAATTTCATCGAAAACATCTGGCTATGACAGTGTTTTTAATGGTCACACAGTGAAAAATCACACAgtgaaacaaaatcaaaaaattaatttgtggtGAAAAAGCTTCCGTGACCCTATTAAAGTCATTTAACCCTGATCATTGTCTAAGCGCTGAATCTTTCTTACTGTtcatattattacttaaaatgcattacccACAATTTAGCATCCAACTATACAGAGCATGTCTGAACCATCAAACTTTCCCACATAATTGAGCAAGAATAAAGAATACATTATCTAAAAGACTCCAGATGGGCTAAGTATCATCATGTGACAGCATTTATCTAGGACACTAGTGGTATATGCAAAGCATATAAATAGCTCAGCAGGCGCTTGTCCAGCTCCTTAAGAGGAAAAGATGACTGTTCTGCTCTTACGCCACACAGGCATAAGTAATGGGACAGCTAACTACTGCACTCACGGCTACAACAATGATGGCCATTAGTAATCCAGGTACTTTGGCGGCACTGTACATTAACACATCACAACACTCGCTCAGATaaatcaatacacacacatacgacGCACACCCTCTGCGTTGACAGTAAGAGGGACGCACAAAAGGACAGCTTCTTCCCTTCACTTATTGCGTCTCTCCACTCTAAATAAGGGTAATACAATCATATTAAAGGGGATCTTTTAGTGTCACTCACAAAGCTGAGTTAATGTCATTGTGTCAGTCCTTCATTCATAACACATCTTCTCGCCTCTTTATTCAGGGTAGTAGTTGTGGAAAAAGGTGAAAGCTCGTTTGAAGTCCTGAACTTCACAAGCATCTCATTCGTAGGTGTAAATACATGCTAGTGATTCCCCTTCCTCATTCTTATCCAGGATACAGACCATAGAGAACCACAGCGTTAAGGTGCTGTGCTCAGACACCATTTTTCCTCTGGTTGCCtcaattatttttacatgtgttAACCGCTTTCTAATTGGACATCTGACAGAAGAACAGTGATATCACTGGCTTTAAGGCTTCTCCAGGAAGAAGAGCTGGTCTCATATACTCATTCCCCCCGGACCACCTCCTCCTGCGGGGTAGTGCCGAATACCTCCTCCTCGACGCAGGGAATGGAGGGCCACCGTGCAGCAACCCCGCAAGAGAGAACCAATATGGTACATTGGCTGACCAACACGGTGTGGACCCCGACAGAGCCAAGCTACTGTGGGGACCACTGGCACGACCACCGCAAGCAAATCCACTAGGAAGTGCCGGCTCCAGTAGTTCTTTGCTGGTAAACCACAGCCAGATGACTTGGACTCTGTGTTCGTCGCACTCTCATCAACCTCATCTTCATCGTCTGTGCCTATATTAATGACATGATCCCCTTCAACCCCAGCCTCTGTTAGTACACTAAGAGGCTGAGTGGTCTGTGGAAGGGGCTCTCCTTCAATGCCAAACAATGGCTCTATGGAGCAAGGTGAGGTGCCAGGGTTTGGCAAAGGGTCTGTCACAGGTTGAGATTGTACTTGGGACCCCATGGTGTCTGTGGTCAAAGCTGTTGTGGTGATTGGTAAGACTGTAAGGATCTCGGAAACAGTTGTCTCCTTGACAGAAGACTCCAACACTAAAGTCGCAGGTCCTTTTGATGCCCAAGGCTCCATTGCAATAGCTGGTGCAGACTTAGTGGAAAAGTCTGTTACGACAGAAACTGTGGCAACTGTTGCCGTAATGGCTGACTCTGTGGCTACCGACTCCAGATCATCTCCCTCATCGGACATCCAGGTAGAGGTCGGACTGCATGCCTGGGAGCGGAAGGTACGCTCAGCAATAGTGTCCAGATCGGAGTTAAAGGACGTACTGGGACCATGAGCAGGTGCCGAAGCAGGGGCATGGTCGTAGTCGGTTTGAATGCCTTGCTCACGCAGGTGATGTAGATATAGGTGATGATGCGACAGACATGGATGACTTACACTGACAGTTGTCCCTGTCCCGATCCCACTGCAGCGGAGTGGCACAACTCTCGGCTCGCTGATGCTCAGTGCTTCATAGGTGGAGGAGTGTGGCAGGCGGGAGTACGCATTAAGCAGCGAGGCCGTCTCTTGAGACAAAAACGCAGCCTCCAGGAGCAGGTCTGCTTTGCTTGCTCCTCTTCCACTTTCTCCACAGCAAACAAACCCGCTGTCCTGCGTGCCCTCACCTGACAAACATGGAATGTCACACCCATTTTCATTACTGCCACGTTCCTGGCCAGTCTGGTCACTTAGCTTGGTGTAGGTAGAGCTGCGGGTAAGCGAGCGAGCTGGGGAGCCTTCAGAAGACTCCACCAGGCCCTCGCTGACCTCCAGCTCTGCCCCCACCACCCCTCCACCTGCCAGGGTTTCGCCTGTTTTGGGGGTCCCGACCTGAGCCAGCTCCATGCTTTGCAATAAAGACTCCAGCTTGTGGTTCTGGAGGTTTATGTCTTGGAAGCACTTTTGCACTCCAGTGTCGGTGTCTCCCAGACTAGATCTGACGACATCGACCACCTGCTTAAGCTGCTGGATCTCCCTGCGAGCCTCCTTCAGAGCCAACTGGGCCTCCACACGGTGGCACTCCTCTTCTATCCAATCCTCTTGCATACGAGACAGCTGAGTACGCAACTCATCAATCTCAGTATCC

Function

NR:

description
PREDICTED: syntaphilin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231625 True 3518 TUCP 0.45 2 10563344 10572246

Neighbor

gene id symbol gene type direction distance location
LOC122329231 LOC107656551,LOC107708819,LOC107570956 coding upstream 114013 10447808 ~ 10449331 (+)
LOC122328600 pcmtd2,LOC107708816,LOC107570992,LOC107701717,LOC107756374,LOC107656550,LOC108433859 coding upstream 130841 10429277 ~ 10432503 (+)
LOC122329277 ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831 coding upstream 181954 10368453 ~ 10381390 (+)
LOC122329250 si:dkey-261h17.1 coding upstream 241337 10316085 ~ 10322007 (+)
LOC122329223 NA coding upstream 306116 10247911 ~ 10257228 (+)
LOC122328564 LOC107707753,LOC107672006,LOC107603149,LOC107657067,LOC107559477,LOC107747970 coding downstream 74717 10646963 ~ 10658747 (+)
commd7 commd7,LOC107671961,LOC107603136,LOC107747977,LOC107719919,LOC107563668 coding downstream 193616 10765862 ~ 10772199 (+)
nol4lb nol4lb,nol4l,LOC107672011,LOC107563666,LOC107657055 coding downstream 214638 10786884 ~ 10870751 (+)
srms zgc:194282,srms,LOC107672012,LOC107560891,LOC107657057,LOC107747981,LOC108435233,LOC108276248,LOC107563676 coding downstream 302578 10874824 ~ 10884303 (+)
ptk6b LOC107719912,LOC107672013,LOC107747980,LOC107657056 coding downstream 312220 10884466 ~ 10892545 (+)
G156387 LOC107747988,LOC107671949,LOC107707743,LOC107603135 non-coding upstream 42577 10520142 ~ 10520767 (+)
G156171 NA non-coding upstream 174718 10387868 ~ 10388626 (+)
G156169 NA non-coding upstream 175844 10386960 ~ 10387500 (+)
G156217 NA non-coding upstream 217290 10263990 ~ 10346054 (+)
LOC122328771 NA non-coding upstream 306938 10254786 ~ 10256406 (+)
G156401 NA non-coding downstream 968 10573214 ~ 10655710 (+)
G156398 NA non-coding downstream 94615 10666861 ~ 10674148 (+)
G156413 NA non-coding downstream 124056 10696302 ~ 10696558 (+)
G156417 NA non-coding downstream 130483 10702729 ~ 10703093 (+)
G156431 NA non-coding downstream 154672 10726918 ~ 10727164 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 8624 10551097 ~ 10554720 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other upstream 44593 10514979 ~ 10518751 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other upstream 136182 10415663 ~ 10427162 (+)
LOC122328781 pifo other upstream 199526 10329851 ~ 10363818 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other upstream 473526 10070780 ~ 10089818 (+)
G156414 LOC107707743,LOC107747988,LOC107671949,LOC107559475 other downstream 126552 10698798 ~ 10700895 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other downstream 341658 10913904 ~ 10923988 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other downstream 504908 11077154 ~ 11085604 (+)
G156586 NA other downstream 602175 11174421 ~ 11177033 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other downstream 1125168 11697414 ~ 11746570 (+)

Expression


Co-expression Network