G156414 (LOC107707743,LOC107747988,LOC107671949,LOC107559475)


Basic Information

Item Value
gene id G156414
gene name LOC107707743,LOC107747988,LOC107671949,LOC107559475
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10698798 ~ 10700895 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231641
ACAGCTGACAGCTGATTTCTCCTTGGCTGTAGGAGGAAACCACAATCTTCAGTACTTTTGGTTTGCGTCCCAAGGGAATACGTTCGGGTTTTGGCTAGAGTCATGGTCCAGACCCGGAAACATGTTTcatgaaagacaaaaatgtaaaaaaacaagagCGGGTCAGTCAGAGAGCGGACATAATCATGTTCCTTCAAGGAAACCCAGATTAGAGGCATGCTCGGGTCTGCAGGTAGATGTTCCTCTAGCTGTGGTTGAGGAGATCCTCCTGAAGCTGCCCGCTCATCAGGTGGTGCGAGTCTGTCGTCTGGTGTGTCACGAGTGGAAGGAGCTGGTGGACAGTGCTGCACACTGGAGAAGCGCTGCCGGAGAGAGAGGATCCAGCCGTGTGATGCTTCCAGACTGCCAGACGACTGGCGCTTGTTTTACTTCTTAACTAGGAAACGACGTAACTTGCTCAAGAATCCCAGAGCGGAAGATAAACTTAAAGGTTGGAATATTATACAGAATGGAGGTGACCGGTGGGCAGCGGAGGACAATAGGAAACCATTTCCGGATGAGACCgtcacaaaatgttttgtaacatctTACGGGTTATGTTTGAAGCAACAGGTTATTGATTTGAAGAAAGAAGGCTACGTTGATGCATTCATGGATCAAATGCAACCTCCTATCAAAATCACAGACTGGT
>TU231643
ATGGGAATTACCAAATCATTTTTACAACATTAGATTGCATGATAGAGAAACACCCAGGGTTTTTGGGGGTCTTTTGCTTTGCAGAGACATAAGGGTGTTCTCGACATCCAAGTCTCGCGAGAGCGTTGGACAGCTGACAGCTGATTTCTCCTTGGCTGTAGGAGGAAACCACAATCTTCAGTACTTTTGGTTTGCGTCCCAAGGGAATACGTTCGGGTTTTGGCTAGAGTCATGGTACGTTTGGCTAATGGGATATTAAAACCGGAAAGACGTGTGTTTATAACGAAAGTGCTGTAGTGAGTCGTCAAGACGCTCCACTGCCAGGCATATTCCGGTTTAGTGCTGCCGCCCTAAGAGTCGTTATCATTGTTATCATTGATGTCTGggtctgaaatattattagtactAGTACGAAGTAGCTGCAACTGTCTGTGTTTCTCTTGGAGTGATGCAATGTACTTTAGAGGATGAAGTAACTTCCGTATTTTCACCCGTAGGTCCAGACCCGGAAACATGTTTcatgaaagacaaaaatgtaaaaaaacaagagCGGGTCAGTCAGAGAGCGGACATAATCATGTTCCTTCAAGGAAACCCAGATTAGAGGCAGTAAGTTGCTTATGATTTCAGTTGTCATAGAGAATAATCAAACTGGCCcagacagattttattttacatcataaCAGGATAGATAGCTGTGATagggtaaaaaaaaccccatctcAAACCAGCCTAGTACTGGCTGGTTTAAGGTGGACATGCTGGTCACAGCTGGTTTTAAAGAGGCTGGGAGGCTCcttaaaccagccaatcagtaaatgctgattttagctgtatttattatgaattgtttttatttattattttatttggcaGATTGTGGTAGTTGGTTCTAGGAGGTTGAAGTTGCAATAAACCACTTACCAGCTGGTCCTACCCGTTTAGCGCTCAACCAGATATTAACAACCATGACCCAGAGGTGGATGAGAAAGTGATTTGTCTGTTCCTCTGTCAGTGCTCGGGTCTGCAGGTAGATGTTCCTCTAGCTGTGGTTGAGGAGATCCTCCTGAAGCTGCCCGCTCATCAGGTGGTGCGAGTCTGTCGTCTGGTGTGTCACGAGTGGAAGGAGCTGGTGGACAGTGCTGCACACTGGAGAAGCGCTGCCGGAGAGAGAGGATCCAGCCGTGTGATGCTTCCAGACTGCCAGACGACTGGCGCTTGTTTTACTTCTTAACTAGGAAACGACGTAACTTGCTCAAGAATCCCAGAGCGGAAGATAAACTTAAAGGTTGGAATATTATACAGAATGGAGGTGACCGGTGGGCAGCGGAGGACAATAGGAAACCATTTCCGGATGAGACCgtcacaaaatgttttgtaacatctTACGGGTTATGTTTGAAGCAACAGGTTATTGATTTGAAGAAAGAAGGCTACGTTGATGCATTCATGGATCAAATGCAACCTCCTATCAAAATCACAGACTGGT

Function

NR:

description
PREDICTED: F-box only protein 6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231641 False 691 TUCP 0.48 5 10698927 10700895
TU231643 True 1489 lncRNA 0.44 3 10698798 10700895

Neighbor

gene id symbol gene type direction distance location
LOC122328564 LOC107707753,LOC107672006,LOC107603149,LOC107657067,LOC107559477,LOC107747970 coding upstream 40051 10646963 ~ 10658747 (+)
LOC122328734 sdcbp2,LOC107657068,LOC107672005 coding upstream 132141 10555276 ~ 10566657 (+)
LOC122329231 LOC107656551,LOC107708819,LOC107570956 coding upstream 249467 10447808 ~ 10449331 (+)
LOC122328600 pcmtd2,LOC107708816,LOC107570992,LOC107701717,LOC107756374,LOC107656550,LOC108433859 coding upstream 266295 10429277 ~ 10432503 (+)
LOC122329277 ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831 coding upstream 317408 10368453 ~ 10381390 (+)
commd7 commd7,LOC107671961,LOC107603136,LOC107747977,LOC107719919,LOC107563668 coding downstream 64967 10765862 ~ 10772199 (+)
nol4lb nol4lb,nol4l,LOC107672011,LOC107563666,LOC107657055 coding downstream 85989 10786884 ~ 10870751 (+)
srms zgc:194282,srms,LOC107672012,LOC107560891,LOC107657057,LOC107747981,LOC108435233,LOC108276248,LOC107563676 coding downstream 173929 10874824 ~ 10884303 (+)
ptk6b LOC107719912,LOC107672013,LOC107747980,LOC107657056 coding downstream 183571 10884466 ~ 10892545 (+)
trnae-cuc_40 NA coding downstream 201174 10902069 ~ 10902140 (+)
G156413 NA non-coding upstream 2240 10696302 ~ 10696558 (+)
G156398 NA non-coding upstream 24650 10666861 ~ 10674148 (+)
G156401 NA non-coding upstream 43088 10573214 ~ 10655710 (+)
G156387 LOC107747988,LOC107671949,LOC107707743,LOC107603135 non-coding upstream 178031 10520142 ~ 10520767 (+)
G156171 NA non-coding upstream 310172 10387868 ~ 10388626 (+)
G156417 NA non-coding downstream 1834 10702729 ~ 10703093 (+)
G156431 NA non-coding downstream 26023 10726918 ~ 10727164 (+)
G156432 NA non-coding downstream 27038 10727933 ~ 10728230 (+)
G156496 NA non-coding downstream 128272 10829167 ~ 10901823 (+)
G156551 NA non-coding downstream 332896 11033791 ~ 11035495 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other upstream 126552 10563344 ~ 10572246 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 144078 10551097 ~ 10554720 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other upstream 180047 10514979 ~ 10518751 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other upstream 271636 10415663 ~ 10427162 (+)
LOC122328781 pifo other upstream 334980 10329851 ~ 10363818 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other downstream 213009 10913904 ~ 10923988 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other downstream 376259 11077154 ~ 11085604 (+)
G156586 NA other downstream 473526 11174421 ~ 11177033 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other downstream 996519 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other downstream 1030085 11730980 ~ 11732361 (+)

Expression


Co-expression Network