LOC122328437 (LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530)


Basic Information

Item Value
gene id LOC122328437
gene name LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11077154 ~ 11085604 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231864
CACGCAGGTGTCTGCTGTAAGTGCCGTAGTAAACTGGGGGAAAAGTCCGAAAGCATTTATCTTTCGCAACTATAACCATGCTCCAGGACGACTGAGCCGCTATGCTGGAGGATCAGGATACCGGCTGTGGCAGGCCGTCCGGGCCTCATCTGCTGCTCCAGGATATTTCCAGGAGTTCCCTCTTCATGGCGATATACACCAGgaTGGTGGTCTTATCCTCAATAACCCCTGTGCTCTGGCTGTCCATGAAAGCCGACTGCTGTGGCCCAGCCAGTCCTTCCAGTGTGTGCTGTCTCTGGGAACTGGTCGCTATGATAACGCTAGAAGAGGGCCTGCTACCTCCACAAGTCTGAGAGCCAAAATCAGTAACCTGATATGCAGTGCCACCGACACAGAGGGTGTTCACACTCTGCTGGATGACCTCTTATCACCAAATGTATATTTCCGCTTTAACCCGATGCTGAGCTCAAACGTAACGCTGGATGAAAGCAGGTCTGAAGTGCTCCAGCAGCTACAGAAAGACACAGAGCTGTACCTGCACCGGAACCAGCCCAAACTGGAACGCCTGTGTGAAGTGCTGAGGACAGAACGCTCAGCGATCTGGAAAACACGGGACTGGATTGGAGGGAAAGCGTGGGAGCTGCAGCAACGCTGGGTTTGAGTGGACTTTACACAGAGCTGATGAGAATTCAGTTAAATGTGTGCAATTATCTGGACGAGAACTAAtacaaaaacatcattaaattaTGAAGATATGTCTTTACTGGTTGCACATGATTGTGAAAGGATTGTGATTGTGTTTTGACAAGTTACAAATGTTAGAGAAGTTACAAATCAAACAGCCATTTTAGACCAGAACATACGAGCACTTATGCCAATGTGAATTCTGTATGAatgtcagtatttttatttatgatgtattcatttctttatttctgttttaacaaaacaaaataaacctaAGAGCACTACTTAGCAGATTATGTAAAGTTCaggtgtttttattactttacccATGAAGTTTAGACAAGTTTATAAATAATGGGAGAACAGGGGAAATGCC
>TU231865
CTGCACTAGTGAATTCACGATGTACTCGCTCATTATGTAGGCTCTAATTTGCAAATTATGAACACAGAAAAAGTTATTTGGCTTTAAGCTAACGAGCACTACGTCGCGGTCTTTGACTGAATCAAGTTTGCACCGCGAACGAAGCCCCTCGACATCCGGAAACACGCGGGAACTGCGACTCGGGGGAGGAGCTTGAACCATCCCACTCAGATTCACTGTGCAGTTCCAGCTCTCGCAGTGATGTACAGTGCGGTGGGTTTGCGCTGGCTTGGCACGTTCATCTCTCTCCCACTGTTCAGGCCTACTATGAGGTGTTTGCAGGAAACAGACTGAAGTGGACCGACACTGGACGCTGTGCTAAAAACTAGTCATAAAGGGATAGAGAGCTTTAAAACAGACTTCCCAGGTCAATGGATGttcattgcatttaatatttaagagtCTGGATATAGTTGTAATGTCAGTATTTGTCCagaataaatgatcatttattgaga
>XM_043224125.1
ACCGGAGCTACTTCTCGAGAAAAAGTTATTTGGCTTTAAGCTAACGAGCACTACGTCGCGGTCTTTGACTGAATCAAGTTTGCACCGCGAACGAAGCCCCTCGACATCCGGAAACACGCGGGAACTGCGACTCGGGGGAGGAGCTTGAACCATCCCACTCAGGGCAGATTCACTGTGCAGTTCCAGCTCTCGCAGTGATGTACAGTGCGGTGGGTTTGCGCTGGCTTGGCACGTTCATCTCTCTCCCACTGTTCAGGCCTACTATGAGGTGTTTGCAGGAAACAGACTGAAGTGGACCGACACTGGACGCTGTGCTAAAAACTAGTCATAAAGGGATAGAGAGCTTTAAAACAGACTTCCCAGacatttattcCATGATTCTGGTTCTGCTGCCAAACCTCGTTCAGTCCTCATTCACATCAGCTGCTtggtctctgttgttgttggAACGTCATTGATGGGTTGGTACCTCGACAAAGCCCAGTTCACTCACCTGGGTTCAAAGCGGTTCCGGTTAGTGTACAAAATAAAGTATCTGCTCACAaacatcagaaatgtttctcatcTTGTCAGGAGGCCTCCGAGGTCATGTGAGAGTATCTACTCCTCTTACTCTACAAGGAGAATCCCTCTCAAATCTCACAGATCAAAGAGGACTATCAAACGTTTTGGAGCAATTAGCAGTAATACgaaatatgcaaatgcattgGGTTTCGAGATATATCGATTATACTCAAGCTCCAGCAGAGAGACTTTCAAAGCAGAAGCTCCCATTGGAGTTCAACAGCACAGCAGGACTACTTTTCAGCTGCATCTACTTAGACTGAGAATAGGAGAGTCTTTTAACCATCTCTCTAGACACATAAACTTGTACTTTAAGCAGAAACAGGTGCCTTTGGTAGATCATGGGAAAAGTGGATGGATGTCTGGAGTTCAGGAACCATTAACCAGAACATCAAGACAAGTTCAGATGGAAAAACGCACTGCAGAATCCGGAGCTTTTATAGGGACACCTCCCAAAGAGCGGGTCTGTCAATCTTTCCCACATCAACCTTTGACCTCAGCCTATCCTGGACTGCAGCTGTTCCACATCAGTTCCTTGGCAAACAGATTTGGGGAGAGTTACAGCTATGTGGCCAATCACATTAACTCTGCATTCTCTAGAAATCCTAAGAAAATTCATATTGAAGTATCATCAGATGATGGGCTCAAACGGTCTACAAGCAGAAAGCGAAGAGTTATGGGTAATAAAAGTGCTCAAACTCAGTTAAACATTAGTACAGTTACAAGACCAGAGATTCATAACAATGTATCTAGTTCCTGGGATGAAGGATACCTCCACTTTGCCCGTCACATCAATCGATACTTTGGAGTAAAAGTAGCAGATACTGTTGAGAAATCATCACATACTGAGACCGAAATCCTGAAGACTTCAGTCTCCCCAGATGCTTTACATAGACTTACAGATCCACTTCTTCAGCCCAAATCTCCAGGCTTGTTCCACATGAGCAGTCTCGCCACACACTTTGGGGAAAATTACACTTACATGGCCAACCACAttaacagctactttaaaggatCTGCAGCTTCAGAGAACGAGGAGGTGGATGGAGAGGTAAACCTTTACAGAGGTTCACATGAGTACACTGAGATCCGGGAAAAACCAGTGTCCTTTTTAGAGTGTCTGTTAAAACCCTCAACTATACCTGGCTTTGTGGGCAGCTACCTGGGGATGGGCTCTTCCGGGCGTAGTGACCAGACCACAACTATAACAACGACCCCAGAGGAAATTCTGCATAAAACAtttttaaggAGGAGGAAGGCTGATGAGATGACTAAAGTTGTACTGAAGAGTCTGGAAAAGGCTACGTTGCCGTCCTCTATCACTTCCTGTGTGGAGGAGCTGAACGCTCACCTCATTCAGCACCCAGCATGCAAATCTGTGGTGTGGCAGAGAAAAGCAGCACTGCAGCTGCTTAAATACCGTCGGGCATTTGGGATGGATGTAAAACTTCAAGAAGCCATCAGGGAAACTCTCGCTCTGATTGGTTATGTGGATCCAGTCAGAGGGTGCGGGGTCAGGGTGCTTTCCATCGATGGAGGCGGAACCAAaggatTAGTTCCACTACAAGTGCTAAAACAGCTGGAGGCTCAGACAGGAAAACGAGTGTATCAGCTCTTTGACTACATATGTGGAGTCAGCACTGGAGCAGTTCTGGCTTTCATGTTGGGTCTAGCTCGTATCTCTTTAGATGAATGTGAAGAGATGTACCATCGCTTCGGGTCAGATGTTTTTCGACAAAACCCCCTGGTTGGTACTGTAAAGATGGGCTGGACACACTCCTACTACAACACAGAAACATGGGAGCTGATCTTAAGGGAGAAGATGGGGGAGGAGCTTCTAATTAAAACAGCCAGAGATGAGCTGAGCCCAAAGGTGTCTGCTGTAAGTGCCGTAGTAAACTGGGGGAAAAGTCCGAAAGCATTTATCTTTCGCAACTATAACCATGCTCCAGGACGACTGAGCCGCTATGCTGGAGGATCAGGATACCGGCTGTGGCAGGCCGTCCGGGCCTCATCTGCTGCTCCAGGATATTTCCAGGAGTTCCCTCTTCATGGCGATATACACCAGgaTGGTGGTCTTATCCTCAATAACCCCTGTGCTCTGGCTGTCCATGAAAGCCGACTGCTGTGGCCCAGCCAGTCCTTCCAGTGTGTGCTGTCTCTGGGAACTGGTCGCTATGATAACGCTAGAAGAGGGCCTGCTACCTCCACAAGTCTGAGAGCCAAAATCAGTAACCTGATATGCAGTGCCACCGACACAGAGGGTGTTCACACTCTGCTGGATGACCTCTTATCACCAAATGTATATTTCCGCTTTAACCCGATGCTGAGCTCAAACGTAACGCTGGATGAAAGCAGGTCTGAAGTGCTCCAGCAGCTACAGAAAGACACAGAGCTGTACCTGCACCGGAACCAGCCCAAACTGGAACGCCTGTGTGAAGTGCTGAGGACAGAACGCTCAGCGATCTGGAAAACACGGGACTGGATTGGAGGGAAAGCGTGGGAGCTGCAGCAACGCTGGGTTTGAGTGGACTTTACACAGAGCTGATGAGAATTCAGTTAAATGTGTGCAATTATCTGGACGAGAACTAAtacaaaaacatcattaaattaTGAAGATATGTCTTTACTGGTTGCACATGATTGTGAAAGGATTGTGATTGTGTTTTGACAAGTTACAAATGTTAGAGAAGTTACAAATCAAACAGCCATTTTAGACCAGAACATACGAGCACTTATGCCAATGTGAATTCTGTATGAatgtcagtatttttatttatgatgtattcatttctttatttctgttttaacaaaacaaaataaacctaAGAGCACTACTTAGCAGATTA
>XM_043224126.1
CATGGCTTCTATATTAATTAATCTAGCTGTAGATGTACGCCTACCGTGCcttgtttttaaagcaacacTATTTTACTTTTAGCGCGCCACCAGTTAATAAACAGAATCGCACGCGTCCCGCGGAAGAACATTCTAACCGGAGCTACTTCTCGAGGTTTGTCTTGTTTTGATCGATTCACTCAGGCGCGGCGGTCACCGCCCGAGCAGACTGCACTAGTGAATTCACGATGTACTCGCTCATTATGTAGGCTCTAATTTGCAAATTATGAACACAGAAAAAGTTATTTGGCTTTAAGCTAACGAGCACTACGTCGCGGTCTTTGACTGAATCAAGTTTGCACCGCGAACGAAGCCCCTCGACATCCGGAAACACGCGGGAACTGCGACTCGGGGGAGGAGCTTGAACCATCCCACTCAGATTCACTGTGCAGTTCCAGCTCTCGCAGTGATGTACAGTGCGGTGGGTTTGCGCTGGCTTGGCACGTTCATCTCTCTCCCACTGTTCAGGCCTACTATGAGGTGTTTGCAGGAAACAGACTGAAGTGGACCGACACTGGACGCTGTGCTAAAAACTAGTCATAAAGGGATAGAGAGCTTTAAAACAGACTTCCCAGacatttattcCATGATTCTGGTTCTGCTGCCAAACCTCGTTCAGTCCTCATTCACATCAGCTGCTtggtctctgttgttgttggAACGTCATTGATGGGTTGGTACCTCGACAAAGCCCAGTTCACTCACCTGGGTTCAAAGCGGTTCCGGTTAGTGTACAAAATAAAGTATCTGCTCACAaacatcagaaatgtttctcatcTTGTCAGGAGGCCTCCGAGGTCATGTGAGAGTATCTACTCCTCTTACTCTACAAGGAGAATCCCTCTCAAATCTCACAGATCAAAGAGGACTATCAAACGTTTTGGAGCAATTAGCAGTAATACgaaatatgcaaatgcattgGGTTTCGAGATATATCGATTATACTCAAGCTCCAGCAGAGAGACTTTCAAAGCAGAAGCTCCCATTGGAGTTCAACAGCACAGCAGGACTACTTTTCAGCTGCATCTACTTAGACTGAGAATAGGAGAGTCTTTTAACCATCTCTCTAGACACATAAACTTGTACTTTAAGCAGAAACAGGTGCCTTTGGTAGATCATGGGAAAAGTGGATGGATGTCTGGAGTTCAGGAACCATTAACCAGAACATCAAGACAAGTTCAGATGGAAAAACGCACTGCAGAATCCGGAGCTTTTATAGGGACACCTCCCAAAGAGCGGGTCTGTCAATCTTTCCCACATCAACCTTTGACCTCAGCCTATCCTGGACTGCAGCTGTTCCACATCAGTTCCTTGGCAAACAGATTTGGGGAGAGTTACAGCTATGTGGCCAATCACATTAACTCTGCATTCTCTAGAAATCCTAAGAAAATTCATATTGAAGTATCATCAGATGATGGGCTCAAACGGTCTACAAGCAGAAAGCGAAGAGTTATGGGTAATAAAAGTGCTCAAACTCAGTTAAACATTAGTACAGTTACAAGACCAGAGATTCATAACAATGTATCTAGTTCCTGGGATGAAGGATACCTCCACTTTGCCCGTCACATCAATCGATACTTTGGAGTAAAAGTAGCAGATACTGTTGAGAAATCATCACATACTGAGACCGAAATCCTGAAGACTTCAGTCTCCCCAGATGCTTTACATAGACTTACAGATCCACTTCTTCAGCCCAAATCTCCAGGCTTGTTCCACATGAGCAGTCTCGCCACACACTTTGGGGAAAATTACACTTACATGGCCAACCACAttaacagctactttaaaggatCTGCAGCTTCAGAGAACGAGGAGGTGGATGGAGAGGTAAACCTTTACAGAGGTTCACATGAGTACACTGAGATCCGGGAAAAACCAGTGTCCTTTTTAGAGTGTCTGTTAAAACCCTCAACTATACCTGGCTTTGTGGGCAGCTACCTGGGGATGGGCTCTTCCGGGCGTAGTGACCAGACCACAACTATAACAACGACCCCAGAGGAAATTCTGCATAAAACAtttttaaggAGGAGGAAGGCTGATGAGATGACTAAAGTTGTACTGAAGAGTCTGGAAAAGGCTACGTTGCCGTCCTCTATCACTTCCTGTGTGGAGGAGCTGAACGCTCACCTCATTCAGCACCCAGCATGCAAATCTGTGGTGTGGCAGAGAAAAGCAGCACTGCAGCTGCTTAAATACCGTCGGGCATTTGGGATGGATGTAAAACTTCAAGAAGCCATCAGGGAAACTCTCGCTCTGATTGGTTATGTGGATCCAGTCAGAGGGTGCGGGGTCAGGGTGCTTTCCATCGATGGAGGCGGAACCAAaggatTAGTTCCACTACAAGTGCTAAAACAGCTGGAGGCTCAGACAGGAAAACGAGTGTATCAGCTCTTTGACTACATATGTGGAGTCAGCACTGGAGCAGTTCTGGCTTTCATGTTGGGTCTAGCTCGTATCTCTTTAGATGAATGTGAAGAGATGTACCATCGCTTCGGGTCAGATGTTTTTCGACAAAACCCCCTGGTTGGTACTGTAAAGATGGGCTGGACACACTCCTACTACAACACAGAAACATGGGAGCTGATCTTAAGGGAGAAGATGGGGGAGGAGCTTCTAATTAAAACAGCCAGAGATGAGCTGAGCCCAAAGGTGTCTGCTGTAAGTGCCGTAGTAAACTGGGGGAAAAGTCCGAAAGCATTTATCTTTCGCAACTATAACCATGCTCCAGGACGACTGAGCCGCTATGCTGGAGGATCAGGATACCGGCTGTGGCAGGCCGTCCGGGCCTCATCTGCTGCTCCAGGATATTTCCAGGAGTTCCCTCTTCATGGCGATATACACCAGgaTGGTGGTCTTATCCTCAATAACCCCTGTGCTCTGGCTGTCCATGAAAGCCGACTGCTGTGGCCCAGCCAGTCCTTCCAGTGTGTGCTGTCTCTGGGAACTGGTCGCTATGATAACGCTAGAAGAGGGCCTGCTACCTCCACAAGTCTGAGAGCCAAAATCAGTAACCTGATATGCAGTGCCACCGACACAGAGGGTGTTCACACTCTGCTGGATGACCTCTTATCACCAAATGTATATTTCCGCTTTAACCCGATGCTGAGCTCAAACGTAACGCTGGATGAAAGCAGGTCTGAAGTGCTCCAGCAGCTACAGAAAGACACAGAGCTGTACCTGCACCGGAACCAGCCCAAACTGGAACGCCTGTGTGAAGTGCTGAGGACAGAACGCTCAGCGATCTGGAAAACACGGGACTGGATTGGAGGGAAAGCGTGGGAGCTGCAGCAACGCTGGGTTTGAGTGGACTTTACACAGAGCTGATGAGAATTCAGTTAAATGTGTGCAATTATCTGGACGAGAACTAAtacaaaaacatcattaaattaTGAAGATATGTCTTTACTGGTTGCACATGATTGTGAAAGGATTGTGATTGTGTTTTGACAAGTTACAAATGTTAGAGAAGTTACAAATCAAACAGCCATTTTAGACCAGAACATACGAGCACTTATGCCAATGTGAATTCTGTATGAatgtcagtatttttatttatgatgtattcatttctttatttctgttttaacaaaacaaaataaacctaAGAGCACTACTTAGCAGATTA

Function

NR:

description
PREDICTED: calcium-independent phospholipase A2-gamma-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231864 False 1063 lncRNA 0.45 3 11083788 11085604
TU231865 False 497 lncRNA 0.45 2 11077362 11078675
XM_043224125.1 False 3413 mRNA 0.46 12 11077289 11085524
XM_043224126.1 True 3664 mRNA 0.46 11 11077154 11085524

Neighbor

gene id symbol gene type direction distance location
naca naca,LOC107737655,LOC107671995,LOC107657042,LOC107563656 coding upstream 1223 11068486 ~ 11075931 (+)
LOC122329335 NA coding upstream 1417 11075662 ~ 11075737 (+)
LOC122329336 NA coding upstream 1988 11075091 ~ 11075166 (+)
prim1 prim1,LOC107741309,LOC107671973 coding upstream 14907 11058159 ~ 11062247 (+)
rnd1a rnd1a,LOC107657046,LOC107737660,LOC107563659,LOC107560900,LOC107672025,LOC103027302,LOC108435239 coding upstream 27498 11041080 ~ 11049656 (+)
nfascb nfascb,LOC107672057,LOC107737654,LOC107741310,LOC107657041,LOC107560902 coding downstream 262 11085866 ~ 11098542 (+)
LOC122329135 LOC107737653,LOC107671959 coding downstream 14468 11100072 ~ 11105175 (+)
mfsd4ab mfsd4b,LOC107737687,LOC107671943,LOC107560864,LOC107741314,LOC107563649,LOC107656990 coding downstream 55875 11141479 ~ 11147587 (+)
LOC122329179 uba3,LOC107737645,LOC107672020,LOC108435248 coding downstream 70218 11155822 ~ 11161895 (+)
LOC122329091 LOC107560879,LOC107741317,LOC107657035,LOC107671941,LOC108436304 coding downstream 79038 11164642 ~ 11168458 (+)
G156551 NA non-coding upstream 41659 11033791 ~ 11035495 (+)
G156496 NA non-coding upstream 175331 10829167 ~ 10901823 (+)
G156432 NA non-coding upstream 348924 10727933 ~ 10728230 (+)
G156431 NA non-coding upstream 349990 10726918 ~ 10727164 (+)
G156417 NA non-coding upstream 374061 10702729 ~ 10703093 (+)
G156572 NA non-coding downstream 38488 11124092 ~ 11126634 (+)
G156568 NA non-coding downstream 63259 11148863 ~ 11152047 (+)
G156590 NA non-coding downstream 125437 11211041 ~ 11243036 (+)
G156592 NA non-coding downstream 133431 11219035 ~ 11313603 (+)
G156599 NA non-coding downstream 159947 11245551 ~ 11311487 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 153166 10913904 ~ 10923988 (+)
G156414 LOC107707743,LOC107747988,LOC107671949,LOC107559475 other upstream 376259 10698798 ~ 10700895 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other upstream 504908 10563344 ~ 10572246 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 522434 10551097 ~ 10554720 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other upstream 558403 10514979 ~ 10518751 (+)
G156586 NA other downstream 88817 11174421 ~ 11177033 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other downstream 611810 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other downstream 645376 11730980 ~ 11732361 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other downstream 1160589 12246193 ~ 12251982 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 3008474 14094078 ~ 14126201 (+)

Expression


Co-expression Network