G156592


Basic Information

Item Value
gene id G156592
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11219035 ~ 11313603 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU231915
ttatttttttttttttttAACTTTGAGGAAATTGTTTATTCCCATAGTCAATGAATTTCATTGATATTTGGGACACTTCACAATAGAGAACTGGACTATGATGGTAAGTCACAGGTAAACCACCTCAGGCGTTGTCTTTCTGAAGTTTAACATTAATACCACAactgaaaaaagttttatttcttaaattcgagatttaaaaaaaagaaaaaaaatgaacatgacCGCCGTTATAATTAATGTCCATACTGACATTTTTCTCCAAGCTCTGCAACAAACCGGTCTCGTGGTTTAGCCAAGCTGTCCATGGCActtaaatctgaatattaaaCATCAGAATAGGGAATTCCTCAAGACCAGTTTGAACAGCGTGGTGGCTTGACTCATCATCTCAAGCCTGGATTGCACTTTTGGTGCTGTAGGCCAGGTAGTAGACCACAATGCCAATCAGAGCAGCCAAGACCTCAGTAGACACCCAGGGACCACTCCATGCACCCTGCAATTCATAAACACACCGATTaacaaacagagagacaaatgatacataaaaaaagaaaatatcacaAACTATATAACACGTTTCTGTGTGgaagtacatttttgttaatgtatgtttatagtttttttttcttggcccCATTCATTAAACGGATAAGAGAACCGATGACAGTCATAAGCATGCATATGTACCCTGTGATCCACATTGACAGAGAACAAAGGCTTGATTGCATCAACGTCTTCATTGTTTCTTTGAGCCTGAAATCAGTAACATTTTCATCAGCCCCATTAAATATACGCAGTCTCGCaaagcactttaaatgaataattaaccCCAAAActgacattatttgctcaccctcaagtcattcAAAacttgcattcatttattatgtagaactatatattaacaatattggTAACCAAACTGTATTATTGCTCTGTGAGTTCAAAGACATTCTTCATAACATTCTTTTATGCTCCACAGAAGCAGGTAGGAATGACATCGGTGAGCAAATAATAATTCACGGGGCAATTATTACAATCAATCCTTAATTTTACCAACCTTTCTTAGAGTGCTGTAAGACTCCTCATCAAAGAACTTGACCTGATATGTGCCTGAGCTGGCCTGCTTATGAGGGACACTCCATGagacctggaaaaaaaaaaaaaaaaaatcagtggaACAGTTTGTCACGTGCCTTGTAAAAATCTTACGTGTATGTCTTTTTCAGAAgactttaaagggatagttcaggcTATTTGAATTTGAGCACTGAGCtccagggaaaaaaaaaatactatggaagtcaacagCTACCATCactcttcaaaacatcttttgcaTTCAAAGAAACTCTTCCAGGTTTAGAGCAAGTGAAAGGTAAGCAGATGATAACAGACGTAAAACTTTTTGGTGACGATCCCTTTAAATCCTGTAACCTCACCTGGTATTTGCCAACATCTTGGCCCCTGGTCACAGGAAACTGTTTGCCATTGACGTCTGCATAGAGAGCAACACTCTGAAGAAGAAGCACAAGTCTGGTCAGTGCACACTTCTAATTGAAACGTGGACTCATGTAAGCATTAGCCGCTCACCTGAGCTCCGTTCGCACACGCCAGGCTCAACTCGACGATGAAGACGGTCTCGGAGGAGATGAGCGCGTCTGTCGTCGTGTACGAAGACGGAGAAATGACCGGGTCTGTGCAAGTCTCGGCTGAGGAGAGAAAACACCGCTTACAAGTTCGCTCCCTGAATCAAACTACGATAAAAAAACGGAACCAATTCGACGTAACGCTAGCCCGAGGCATCTCGGTGTTAGCAAAGACGACAAAGAGAAACGACTGAACGAATGATGATGCCGTAcatgaaagaaatgtgaaaGTTACCTGCACACAGGCTAAGACAAAGAGCCAAAATCGCTGTTATAACTCTCATTGTGTCGGTCCCCGGGCAGCTGAATCTACCGCTAACGTTACTCAAGTCAAACCTGCGGAAAGAGAGCAGAGCTAGCCTTCACCCAATGAAACGCGCACAGACACGTCACCTCAGCGCAGGGGTGA

Function

GO:

id name namespace
GO:0004576 oligosaccharyl transferase activity molecular_function
GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity molecular_function

KEGG:

id description
ko00510 N-Glycan biosynthesis
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
TU231915 True 2061 lncRNA 0.41 2 11219035 11313603

Neighbor

gene id symbol gene type direction distance location
LOC122329091 LOC107560879,LOC107741317,LOC107657035,LOC107671941,LOC108436304 coding upstream 50577 11164642 ~ 11168458 (+)
LOC122329179 uba3,LOC107737645,LOC107672020,LOC108435248 coding upstream 57140 11155822 ~ 11161895 (+)
mfsd4ab mfsd4b,LOC107737687,LOC107671943,LOC107560864,LOC107741314,LOC107563649,LOC107656990 coding upstream 71448 11141479 ~ 11147587 (+)
LOC122329135 LOC107737653,LOC107671959 coding upstream 113860 11100072 ~ 11105175 (+)
nfascb nfascb,LOC107672057,LOC107737654,LOC107741310,LOC107657041,LOC107560902 coding upstream 120493 11085866 ~ 11098542 (+)
myh7bb myh7bb,myh7b,LOC107672010,LOC107737633,LOC107657025,LOC107741323,LOC107562469 coding downstream 48279 11361882 ~ 11378016 (+)
emp3b emp3b,LOC107562456,LOC107671979,LOC107741326,LOC107737636,LOC107657024,LOC107560919 coding downstream 74313 11387916 ~ 11390286 (+)
LOC122328759 cox4i2,LOC107737631,LOC107672030,LOC107560926,LOC107741330 coding downstream 128294 11441897 ~ 11444744 (+)
fkbpl LOC107672039,LOC107562454,LOC107657000,LOC107712683,LOC107560883 coding downstream 194365 11507968 ~ 11510961 (+)
trnan-guu_35 NA coding downstream 199022 11512625 ~ 11512698 (+)
G156568 NA non-coding upstream 66988 11148863 ~ 11152047 (+)
G156572 NA non-coding upstream 92401 11124092 ~ 11126634 (+)
G156551 NA non-coding upstream 183540 11033791 ~ 11035495 (+)
G156496 NA non-coding upstream 317212 10829167 ~ 10901823 (+)
G156432 NA non-coding upstream 490805 10727933 ~ 10728230 (+)
G156633 NA non-coding downstream 18139 11331742 ~ 11332927 (+)
G156681 NA non-coding downstream 219032 11532635 ~ 11533198 (+)
G156682 NA non-coding downstream 220987 11534590 ~ 11534917 (+)
G156684 NA non-coding downstream 226012 11539615 ~ 11540315 (+)
G156685 NA non-coding downstream 227037 11540640 ~ 11555919 (+)
G156586 NA other upstream 42002 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 133431 11077154 ~ 11085604 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 295047 10913904 ~ 10923988 (+)
G156414 LOC107707743,LOC107747988,LOC107671949,LOC107559475 other upstream 518140 10698798 ~ 10700895 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other upstream 646789 10563344 ~ 10572246 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other downstream 383811 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other downstream 417377 11730980 ~ 11732361 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other downstream 932590 12246193 ~ 12251982 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 2780475 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 2986098 14299701 ~ 14343274 (+)

Expression


Co-expression Network