G156973


Basic Information

Item Value
gene id G156973
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12061447 ~ 12064715 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU232458
ttattagtgTGCATCCCTTTACTTTGCAAATAATACTCATCAGCCATTGACCAGATAAACAAGACACAATTTACTGATTTACACACTTGCAGcacacaaaatgtcatgttGAAAATCTAAATGTGCAATGGAGAAGGACAGCTATTCCTACGGCATGTctaataaaagtgaaatatcaCCGTGATATTTGTAAGAATTTGTGGTTTGGGTTTTGCTGCTACATAAACAGTACTAATTATAGTCTTTAGTATATACAGAAATTGCCGACTAATTGGGGTCAGAGACttaggagaagaaaaaaaaaacaatgtttaatcGATAAACTCCTCAAAACAAAGCCATACAAATCAAAATGTCAGACCAACTAAACAacgtgtgttttattttttattctgttttcaaGCGTTCGTTCTTAAATACAGTGAAGTGGTTTGGCTTTGGCATTGGTCTATGCAGCGGTAACAAGCTGCTGATCTAGACTAAATCTAGACTAAACACCCACAAACGTGGGGTCTACCATGGCATGTGCTTCTAGCGAATTTGAGTGCCATCATAACACGATGAGCCTGTAAACCACACCACAGCTTGGCTCCTTGGATCTTGCAATGAGGGTTCAGTGGGAGCCCAACCTCGGCAAACCCCACAGAggtgtttatctgtctgtctgctggaGATGGAGAGCAGGAAGAGGACAAAAGGGGGAAGTGAATTTGAGTGGCACTGAGAGGTAAAGGTTCCTGTTGGCAGGGGTGAGAGGGGAGAGGAATGTCCTTGAGTCTCTGTTTTACTGCACGTTCTCCATCATCTTGAGGAATTCTGGGGGAAAACGGACATGGGTGTTGCTTCCATACCTGCTCTGAATTCATGCATGCTCataaatgaaaggaaatgtCGTTTATAAACCATCATACCATCAAAGTCCAGCATGCCATCGTTGTTTTTGTCTCCATCTTTAAGCAGCTCATCAATCTCTTCCTCTGAGATGGATTCCCCGGTGCTGCGGATGATCTCAGCAAACTCATCTCTGTCGATGTAGCCATCACCGTCCTGTCCAGCACACGGAAGCATTCGGCCAACTCTTCCTCGCTCTTGCCAGCCTGATCCTCCTTAAGGAGTCTCACCATCATGACCAAGAACTCCTCAAAGTCGATGGATCCGCTGCCTGCAGTTTCCAGTATAAAGTACATTAGCTATTACAATCTAATTCTTGTATGTTATGCTTAACGTTGAACAGGTATAATCATTATacgaataataaaaatgtacagataTCATCAcgcaatatgtaaaaaaaaacaaatgtgaaaacaCTGAATATATTTGATGTGCGCTCTTCCGTATTCatgatataataatgataattataataatgcacaAAAGACAAAAGCGCACGAAAATGAGCTTGAGTATAGTATATTTGGTGCAGTGTTATATAGTTCTCTGTTCTAGCATTTTGCTGACCGTCTTCATCGACCTCCTCGATGATTTCTTCCAACTCCTCTCTTGTTGGATTCTGACCCAGCATCCTCATGACGGTACCCAACTCCTTGGTGCTGATATCACCGCCACCGTCGGTGTCGAACATGTCGAAGGCAGCCTTGAACTGGCAAGCATCTCCTCGCTCAGGTATGAGCGGGCCTCTTGTTGCGCGTCAGTCTGTGAAACGGTTACATTATGAGCGGTTAATTACAGATATAAACATTGCAATGCATTAATCTAATAaatgtgaccttggaccacaaaaccagtattGAGAATCCCTAGTTCGTCCTGAcagacatttgtttttgttttcctaaTAATCTGTTTGCATTGTAGGACTGCAAACAACAGATGGTACCCAGAACACTCCTCCAAGACCATTTGCGACTATTTTAAGGCTCAACACGTTATCCTTGCAGTCAGTGACTGTACATGGTAATTCCGAAATAGGATCCTTGGAATGTGTCTCTTCAGCTTTTAGTTAACCTACTTAACCTAACCTGCTGACCAGATTCATATCAAATAGCATGATGTCCATCTTACCGCCCCTTCTTTTAAAGACTCAAGTACCATTAGTAGTACCATTTTACTTCAGCAAATATATGGATCTTTGACTATTTGGTCTTGGATAAATTATGGTCCTACAAGCAATTTTTTTACAAGCAACTTTATCATGGATTTTGCGGCAACCTgacaaatttatcaaaagtgagtGTAATggtattgtttttcttctctttactttttttctgagaattcTTGGGCTTGTAACAGATTAATTAGCAGTCAATTAACGTTGAATCTATTAAGTCACCTAAAATTAACACCTAATAAAGTTGTATCAAACATTGTTGCCCAGGCAAAAATAAGTCCAAAATAGATCAATTGTCTGTAAAATGGAATGTTaaagagacaaacaaaaaaaaaaacagatttaaatgtatttacattattatttttatttatttaatctatttttttaaaccataatgATTAAGATTAAATCACactaagttagttttttttattacttttatgtaAGCTTAATTAATTTCATGCAAAACTGTGAAGGGAACTATTAACAATACTGTAACCTTATATAATccattattaataatgacagaaatgtaattcTGGCTTTTTGACTAGgccattttgcacattttatgttttcatgcGTTCATTAACAAAACTGACTGCTTAGATCATTTAAACTCTTACCATGGTTGTGGATTAGCCTCCTCAATTATATCCACGAGACAAGCAGTGGTCAACGCGCTCGCACCCCAACAGAAAGACTAGACGTCAAGTGACAGTTCTGACACACTTTAAACAGGCCACCCAAGACCCGCCCACAGGCCTCCAGATTTAGAATCCTGAACTTTTAGGGTTCGACGGCTCCCATAAGCCAATAGAAATGTGAAATGAGTACACTTTAAGAACAGTCTGAGAGAATACAGGAAAATGGTAACTGCCTTATTCTGGTGtgtttaatgaacaaaaaaaactgtatttatttgaagaacTGTTCAAagacacaataaaataattatttagtgtGTCTGGTAAAACTTCATTTGaaaattttatgttaatattgaaCACACTAATGTTTAGAC
>TU232460
ttattagtgTGCATCCCTTTACTTTGCAAATAATACTCATCAGCCATTGACCAGATAAACAAGACACAATTTACTGATTTACACACTTGCAGcacacaaaatgtcatgttGAAAATCTAAATGTGCAATGGAGAAGGACAGCTATTCCTACGGCATGTctaataaaagtgaaatatcaCCGTGATATTTGTAAGAATTTGTGGTTTGGGTTTTGCTGCTACATAAACAGTACTAATTATAGTCTTTAGTATATACAGAAATTGCCGACTAATTGGGGTCAGAGACttaggagaagaaaaaaaaaacaatgtttaatcGATAAACTCCTCAAAACAAAGCCATACAAATCAAAATGTCAGACCAACTAAACAacgtgtgttttattttttattctgttttcaaGCGTTCGTTCTTAAATACAGTGAAGTGGTTTGGCTTTGGCATTGGTCTATGCAGCGGTAACAAGCTGCTGATCTAGACTAAATCTAGACTAAACACCCACAAACGTGGGGTCTACCATGGCATGTGCTTCTAGCGAATTTGAGTGCCATCATAACACGATGAGCCTGTAAACCACACCACAGCTTGGCTCCTTGGATCTTGCAATGAGGGTTCAGTGGGAGCCCAACCTCGGCAAACCCCACAGAggtgtttatctgtctgtctgctggaGATGGAGAGCAGGAAGAGGACAAAAGGGGGAAGTGAATTTGAGTGGCACTGAGAGGTAAAGGTTCCTGTTGGCAGGGGTGAGAGGGGAGAGGAATGTCCTTGAGTCTCTGTTTTACTGCACGTTCTCCATCATCTTGAGGAATCATCAAAGTCCAGCATGCCATCGTTGTTTTTGTCTCCATCTTTAAGCAGCTCATCAATCTCTTCCTCTGAGATGGATTCCCCGGTGCTGCGGATGATCTCAGCAAACTCATCTCTGTCGATGTAGCCATCACCGTTCCTGCAGATTCACAGTATTACGTATGATAAAGTGAGTCTGGGTCACATTCAAAAACAGGTGCACACAAGAAGATATCAGATGTCATACCTGTCCAGCACACGGAAGCATTCGGCCAACTCTTCCTCGCTCTTGCCAGCCTGATCCTCCTTAAGGAGTCTCACCATCATGACCAAGAACTCCTCAAAGTCGATGGATCTGCTGACCGTCTTCATCGACCTCCTCGATGATTTCTTCCAACTCCTCTCTTGTTGGATTCTGACCCAGCATCCTCATGACGGTACCCAACTCCTTGGTGCTGATATCACCGCCACCGTCGGTGTCGAACATGTCGAAGGCAGCCTTGAACTCTTTGAAACAGACACATAAAGTTTAATGGAAAAATCGACGTGAATACTGGTGATATATCCTCTTTGTCAGTACGCTCACCGGCAAGCATCTCCTCGCTCAGGTATGAGCGGGCCTCTTGTTGCGCGTCAGTCTGTGAAACGGTTACATTATGAGCGGTTAATTACAGATATAAACATTGCAATGCATTAATCTAATAaatgtgaccttggaccacaaaaccagtattGAGAATCCCTAGTTCGTCCTGAcagacatttgtttttgttttcctaaTAATCTGTTTGCATTGTAGGACTGCAAACAACAGATGGTACCCAGAACACTCCTCCAAGACCATTTGCGACTATTTTAAGGCTCAACACGTTATCCTTGCAGTCAGTGACTGTACATGGTAATTCCGAAATAGGATCCTTGGAATGTGTCTCTTCAGCTTTTAGTTAACCTACTTAACCTAACCTGCTGACCAGATTCATATCAAATAGCATGATGTCCATCTTACCGCCCCTTCTTTTAAAGACTCAAGTACCATTAGTAGTACCATTTTACTTCAGCAAATATATGGATCTTTGACTATTTGGTCTTGGATAAATTATGGTCCTACAAGCAATTTTTTTACAAGCAACTTTATCATGGATTTTGCGGCAACCTgacaaatttatcaaaagtgagtGTAATggtattgtttttcttctctttactttttttctgagaattcTTGGGCTTGTAACAGATTAATTAGCAGTCAATTAACGTTGAATCTATTAAGTCACCTAAAATTAACACCTAATAAAGTTGTATCAAACATTGTTGCCCAGGCAAAAATAAGTCCAAAATAGATCAATTGTCTGTAAAATGGAATGTTaaagagacaaacaaaaaaaaaaacagatttaaatgtatttacattattatttttatttatttaatctatttttttaaaccataatgATTAAGATTAAATCACactaagttagttttttttattacttttatgtaAGCTTAATTAATTTCATGCAAAACTGTGAAGGGAACTATTAACAATACTGTAACCTTATATAATccattattaataatgacagaaatgtaattcTGGCTTTTTGACTAGgccattttgcacattttatgttttcatgcGTTCATTAACAAAACTGACTGCTTAGATCATTTAAACTCTTACCATGGTTGTGGATTAGCCTCCTCAATTATATCCACGAGACAAGCAGTGGTCAACGCGCTCGCACCCCAACAGAAAGACTAGACGTCAAGTGACAGTTCTGACACACTTTAAACAGGCCACCCAAGACCCGCCCACAGGCCTCCAGATTTAGAATCCTGAACTTTTAGGGTTCGACGGCTCCCATAAGCCAATAGAAATGTGAAATGAGTACACTTTAAGAACAGTCTGAGAGAATACAGGAAAATGGTAACTGCCTTATTCTGGTGtgtttaatgaacaaaaaaaactgtatttatttgaagaacTGTTCAAagacacaataaaataattatttagtgtGTCTGGTAAAACTTCATTTGaaaattttatgttaatattgaaCACACTAATGTTTAGAC

Function

NR:

description
PREDICTED: protein tyrosine phosphatase domain-containing protein 1-like

GO:

id name namespace
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232458 True 3101 lncRNA 0.38 3 12061447 12064715
TU232460 False 2875 lncRNA 0.39 3 12061447 12064715

Neighbor

gene id symbol gene type direction distance location
LOC122329006 LOC107712662,LOC107593423,LOC107699566 coding downstream 12656 12047116 ~ 12048791 (-)
si:rp71-17i16.5 si:rp71-17i16.5,LOC107712701,LOC107699595,LOC107593445 coding downstream 16142 12038033 ~ 12045305 (-)
si:rp71-17i16.6 NA coding downstream 28701 12030850 ~ 12032746 (-)
lamb2l lamb2l,LOC107672045,LOC107568836,LOC107699593,LOC107593402,LOC107712713,LOC107737682 coding downstream 31217 11995970 ~ 12030230 (-)
lamb2 lamb2,LOC107737594,LOC107672036,LOC107699592,LOC107712697 coding downstream 66556 11961859 ~ 11994891 (-)
taf13 taf13,LOC107671955 coding upstream 632 12065347 ~ 12066172 (-)
znf362b znf362b,LOC107593390,LOC107737708,LOC107565834,LOC107699608,LOC107712695,LOC107671956,LOC108434701 coding upstream 139618 12204333 ~ 12212104 (-)
megf6a megf6a,LOC107687467,LOC107593418,LOC107712656,LOC107671929 coding upstream 320128 12384843 ~ 12440260 (-)
her12 LOC107703051,LOC107591151,LOC107737706,LOC107593438,LOC107687468,LOC107712674 coding upstream 452207 12516922 ~ 12519193 (-)
LOC122328351 LOC107737705,LOC107712654,LOC107703076,LOC107712673,LOC107593382,LOC107593415,LOC107687469 coding upstream 457106 12521821 ~ 12531561 (-)
G156978 NA non-coding downstream 79 12055246 ~ 12061368 (-)
G156972 NA non-coding downstream 209737 11793603 ~ 11851710 (-)
G156971 NA non-coding downstream 279081 11781567 ~ 11782366 (-)
G156962 NA non-coding downstream 298424 11762440 ~ 11763023 (-)
G156812 NA non-coding downstream 521402 11539623 ~ 11540045 (-)
G157012 NA non-coding upstream 34252 12098967 ~ 12099726 (-)
G157035 LOC107737586,LOC107672037,LOC107712704 non-coding upstream 86645 12151360 ~ 12156300 (-)
G157036 NA non-coding upstream 92687 12157402 ~ 12158314 (-)
G157022 NA non-coding upstream 108671 12173386 ~ 12174187 (-)
G157100 NA non-coding upstream 175219 12239934 ~ 12241416 (-)
G156985 NA other downstream 136797 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 203479 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 259815 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 314827 11741400 ~ 11746620 (-)
G157367 NA other upstream 1076363 13141078 ~ 13217408 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 1215541 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 2158094 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 2262251 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 2505632 14570347 ~ 14589622 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1404628 LOC106566457 non-coding NC_048580.1 CM023234.2 68913629 ~ 68915352 (-)