G156978


Basic Information

Item Value
gene id G156978
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12055246 ~ 12061368 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU232469
ATTAAAATTGCTTATACTGATTCAAAAAAAAGTAGCGTACAGAtggaaattcatttttaaaatggagagagccGATAGTGTTCTGCACCACCCCCCTTTAGTTAAGCCGAGAAACCCTAAACCACTTGGGAAGGTGCTGTGTTGCAAATCTTCAGCGTGCCCTGAATAGCAAATGGTTCAGATCTCAAGTCCACCCCAACCAAAACCCAACCACACGAATGGCGACACTGGTACCCCAAACCCTGAAAAGCCTAAATCGAGTTTCCATGTATGGCATGTGTTTCCTGAGCAAGGAACTGTACAGACGTGGGAGAACTCAGAGGAGGGGGTTGTGGACTATATACTTTCAGGGAGAAATGGAAAGATTTACAAGGAGATTTTCAGGAGAGCAGAAAGGTTCGGTTTTGCAGTTTGCATATCATTGCAGCTCTGGAGAATTGCATTTATAGGAATGGCGAGAGATAACACCTCCATCAATATGACCTGAAGGCAGCAAGGTGTCAAAAGGATCACATGGATTTCCACCATGAGAAGAAAATATGGAAATCTGACCTTTTTCACCTTTcagaatttttatgtttaacttGCATGCTCCTGGCACAAACGCCGATGTTAGgattcaaaatgtatatttttcctGACCTTTCTTGGCCAGGTTATGTATGAAAATATCAGCGGAGACCAACAGACGAAATGATCAATATACTCTGCAACACTATGGATCTACTGGACAACCAAAGTGTTATGTATTTTGGACACGGGGTTCTGGAATCCAACTTGGTGGgatgttcttgtttttgtgATTGGGTGTAGAGAAATTATGGGCAAGGTGGGTGAGAAGATCACATGAGTTGCAGCTTTTAGGAATTTTGATATTTGGCCTCACAACAACCTTTTTAAGCTTGCAAATTgcatttagctttaaaaaaatgccaaaGCTGTAAGTTTTTACAGACTCAGATTCTGCGTAATTTTACATGACACAATCACCAAACAAACAAGCAGATTGGCCAAGACGTGCTTCTTTAATAGATTTGCATACGCCGCTTACATGTGAGCTAAAGAGATTCCGTATCGCCATGACAACATTAAGTCTTTTTCCGTGGCTAATGCTGTAGTTATTTTGAATCAATGTAAAGGGTGAAGGAGAGGGGAAGGGGTTTGAAGGAAACTTGCTGAATGTCTTGGGAATAAGCAGGTGTAGTAGCAGACAGCTGAAGGGAGAGGCGTAAGTGGTTTCCTCTTAAAAGGTTTGAAGGGTTATTTATAGATACCATCACAGTGTGGTCCCAGAAGAACACTTCCAACAAGATGGCACTGATCTATAATATTCTCTGTCCCTCAAATCAAATTCCAGCCTATCTTTGTTATTAGTGATCTGAACCAGAGTCTTTTTCCTTTAAACATCTCAGCATGGGTTGTTCTTGGGAGTCTTGACTGCTGTCATTAGCACTTGGAAGAGATggaatgttattttttcttacTGGACGTTCTCCATCATTTTAAGaaactctaaaataaaaaaaataaaaaaatgagatgGCATAAAATACAAGCCTCTTTCCTGGTATTGTTTAAACTCTGTCCACTCTGAACATGCTTTGCATTCAAATACTGTGATTTTTCTATAAGGAAATGGCTCTGTTCTCTCATTTCTTGGGATTCAAACGAACTGGAAGTCAGGAAAAACATTCCCCTGAGTATGTgtgtaattacatatttttatatatgtgtgtaattttatatGCTATAATAAACACTTGAAAGTCCTTAATTGGGATAAAACATGTTGTAGACATGCATATAGTTATCActgcattaaataacaaaatatctaACCAGACCGAATTTGCAGTCAAATTACGCAAGGGCTTTTATCATATGTATCTAAATTTAGCTATTGGCTCAGTATtttgtatacatatacaaaaaaataaataaagtataatctCTAGGTGACATGGAAATGGTAAtctgtttcttttattaataatctacttttacttttacagtcccactttattttaagcttcagttctcactattaactaattaCTGCTTACTGCTAAGGTAGTTGTAAAGTTTAGATCTTGGGTAAGATTGAGGATCTATATGTGCATTTCACACAGAATATGCGATTTAAACACTAATGAACAgacaatatgctagtaatatgcatgttactAGCAACTAGTTAGTAGTGAGAGTAGGTCTCtcatactaaagtgttacctttttttaccttttttcaataaagaataaaatttgCTTTACCATCAAAATCAAGCTTCCCGTCTTTGTTTGTATCTGCATCGGCCATGAGTTCATTTATGTCTTCTTCTGCCACTGGCTCACCAGTTGCACGCAAGATATCAGCAAACTCTTCACGATCAATGAAACCATCTTGGTTCCTGttggaaaaatataattttattgcagttttaatTGCAGAATTGTTTATGATTTTGTTGTCAAGCTAAGTGACTTGTCTTGTGATGTCAGGATCTGACTGTGATGCCAGGATGATTTGGAGGAGTGTTTTGGTTTAAAGCGGTCATGAAGTAAGAAACCAAACTTCCTTTAATCTGTTGACATATAATGGCCGTTCACATGTGCCGTCTTTTGTTCACTGAAGTTCGCTATTTCAAATGTAGACGCGCGGTTTGCACGCTCATAATGGAAGCAACGCGCTTGTTTTTTTCCAGGCGCCAcataaagataaaaacatttcaactttTCAGAAGGCCACAAGCACACCATGGGTCATCATTTGACCCGTAACAACATTGAAAGGTCATCCAAAATCAAGCAATAGTTTGTCAAAGCTGTACAAGTATaggtattttaaagaaaattgatCTGCTGCAAGCGATTTTTAGTCCTGGAAATCCATTAATCATTTGCTGAAATTTCCAcatcttcatatatatataaagtggctttaaagaacatttaagtTGACGGTCAGCGTGTAAGCTGTCACTGGTCCTCTTATAGCATCAAAACAAAGCTTATTCAAATGGATAAGTCAAGAAAGCATGCTCCCtttatgataattaaaaagCTGTCTCTCATTTCAGTATATCACAAcctcacaaaaatgaaaactctgaaatgaacaaaacagaATTGGCTGCAATGATCATTGCTACAAAAACACTTTGAAAACAGAAACCTTTAAAattcaaacacaaatacacactagagtattttgaaaatactttCACCAGTATCCTATTTCTACAGCTTCAACTGACTTTTTGCTGGCATTTTGTCCTACTTCAGGTCCTGAGAGATGGCGCCCTGGAATCTGAATGACTCTACTGCAGCCACAGTGCTGTCTTTAATGGTGAGTGGGGGGAGAGCAAGGGactcctgaagtccactatcatctccaATAATTTGACTGTGACATCCAGCTCTAGAAGAAACTTCAGAAGCTTGACAGAGGGATCAGTAAAGGTGCAGTCATATGTGTACAGAGGGAGATAATACATCCCTGGGAGCACCAGCGCTGATCACGAGAGTCCTGGATGTGAGTTCTCCCAGACTCACTAACTGCTTcctgtctgtcaggaagctgcttATCCACTGACAGATGGAGGTGGATACAGAGAGCTAGgCAAACTGAAGAGGATCCGGCAAAAGTCCTCCAGCTATGTCCTTCAGGTAGGCCACAATGAATCTTTTAAATGACTTCAGTGACCTCACAGACACGAAAGCGGAAAGGTCTGTAGTTGTTTTTGGGGACCAGAATGATAGTGTAGCCTTTTAAGCAGCGGGGGATTTCACAGAGATCTAGTTATCTGTTAAAGCTCTTTGTGAAGATGGTGGGGGTtcaaaaaagaaacagcattttctgtatttaatttcggggtaaaaaatttttaattaataaacgcAAAAGAACACACGCCTTGGGTCCATGTACTTTTTGCATTcattactttttcctttttcaacccagaaatgaaatatgaaaaatatggtTTCTTCCTGAGTGGTTCTAACGCTGATGAATAGACACAAActtattttcattattcaaattcgtatttcataaaatattgtaaaaattactgtacattaaacCTTCTAGCTTTTTAGAGTCTTTATAGCCAACAGACACTATAAGCGTCCTCTTGCAGTCTGCTTACATGCTGTATGGCTTTAGGAGTGACATTCAGATTCTGAAATCCCGCTTGCCTGTATATGGAGAAGTTGGAGAAActataattttatgtatttctatatttaccctatatattaaaatcactTGAAGCACTCTAACACAATATTCTGTATGTATTTTAAGCAGCCATGCATGGTCACTACCGTGACCTAGATAACACACAAAATTCGGACAAAATTATACctcaatatataatttaatgatgATAAAGTTCCCAAGAttgtgcaatgtttttttatttttttttttatcatatttgtaTTAGATCCCTGCATTGTTCTAGAGGTGACTCTAGTTCTCAATTGAACATACGAGAGAAGCATTACTTCTAATTTGGCTAAATAAACcccattaaaatgtacatattttaatattttgttttgtgcctttttaaatgttttttttaaaggtgcaaATAGTCAGAAACAAAAGTctaaaaagaagacaaaatgtTACTTTTCCGGGCCGCATTTTATGTGTACGGTTCTGATTACCTGATTCCTGATTACCATTCCTGATTACTGATTAAAATTCCAGATAACCAGACAATGATTCAtcttttataaatcattaaaataataatgtctgGTATACATGGAAACTGTGGAGTacgcatatatttttaatgacctTTCTAATGACCTTTCCTCACACTGCTGTTCAGTTTGGTGTTAACATCTAATTACATACTTGTCAAAGACACGGAAGCATTCGGATAGTTCCTCCTCAGTCTTGCCGGCTTGGTCTTCTTTTAGCTGCTGCACCATCATGACCAAGAACTCCTCAAAGTCAATAGTGCCACTGCCTGAGAATGCAAAATTGAGATGTGATGGGACAGACTGAAGTGCAGACAGGATTTGTATTTGTATCCAGATCTGAATGCTTCAGATTCCAATTCTGACCCAACAAATTTTGCTTTATTCCTTAAACATTTCAATCTTACCAAATTAAATTACTCCCCATGCAATATATTGGAAAGCCCTTGGATAATCAAGGAATTCAAATCCATCCTTGATTCCATGAGTAGATATAAAGTCCCTGGGTTAAATAGGATTCCCTCAGAAATACTGAAAACACTGTGGGACATTATAGCAGCCAAGATTATATATAATGCTCCTAATTTCGCGTCAGAAACACAGGGGACTAAACCACAGCTTTAATAGCTTTGCTGCTGAAGAAAGGGAAGTGATTTACTTATCTTCTATCCACAGATTCAAAGCTGATGACAAAAGTATAGGAGACTACACTGACTAAGATCAATCTAATTTAAATCAGACAATGCCCAACAATAGTTtcaataaattgaattaaaaatttgGTCCAATTATATGCCATTCTGCCAAAACCTGGAAAGCAGCAGAAAGGTTTATGAGAGCTTCAGCTTCAGACTCCCATATGGCATTATAATAATCTTAGCACTTGTAACAAACCATTCGTTTCCAAAAGTTCTTTCAGATTCTAAAGGATAAATTATCTCTCCCAGGATTATCTCTCTCCGAGGCAGAAGACCTTTGTTGGATGCCCCTGGTCTTCAAGCTCCGCTGTAAATAAAGTCCGACCAAACTTACCATCTTCATCTACTTCTTCAATGATAGCATCCAGTTCCTCTCTGGATGGATTCTGACCCAGCATCCTCATGACGGTACCCAACTCCTTGGTGCTGATATCACCGCCACCATCAGTGTCGAACATGTCGAAGGCAGCCTTGAACTCTTTGATTTGagatgaaaaaaaggaaaaaataaattagaaaaatagaATGTGAAAAGCTG

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0048468 cell development biological_process
GO:0022607 cellular component assembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232469 True 5964 lncRNA 0.37 2 12055246 12061368

Neighbor

gene id symbol gene type direction distance location
LOC122329006 LOC107712662,LOC107593423,LOC107699566 coding downstream 6455 12047116 ~ 12048791 (-)
si:rp71-17i16.5 si:rp71-17i16.5,LOC107712701,LOC107699595,LOC107593445 coding downstream 9941 12038033 ~ 12045305 (-)
si:rp71-17i16.6 NA coding downstream 22500 12030850 ~ 12032746 (-)
lamb2l lamb2l,LOC107672045,LOC107568836,LOC107699593,LOC107593402,LOC107712713,LOC107737682 coding downstream 25016 11995970 ~ 12030230 (-)
lamb2 lamb2,LOC107737594,LOC107672036,LOC107699592,LOC107712697 coding downstream 60355 11961859 ~ 11994891 (-)
taf13 taf13,LOC107671955 coding upstream 3979 12065347 ~ 12066172 (-)
znf362b znf362b,LOC107593390,LOC107737708,LOC107565834,LOC107699608,LOC107712695,LOC107671956,LOC108434701 coding upstream 142965 12204333 ~ 12212104 (-)
megf6a megf6a,LOC107687467,LOC107593418,LOC107712656,LOC107671929 coding upstream 323475 12384843 ~ 12440260 (-)
her12 LOC107703051,LOC107591151,LOC107737706,LOC107593438,LOC107687468,LOC107712674 coding upstream 455554 12516922 ~ 12519193 (-)
LOC122328351 LOC107737705,LOC107712654,LOC107703076,LOC107712673,LOC107593382,LOC107593415,LOC107687469 coding upstream 460453 12521821 ~ 12531561 (-)
G156972 NA non-coding downstream 203536 11793603 ~ 11851710 (-)
G156971 NA non-coding downstream 272880 11781567 ~ 11782366 (-)
G156962 NA non-coding downstream 292223 11762440 ~ 11763023 (-)
G156812 NA non-coding downstream 515201 11539623 ~ 11540045 (-)
LOC122328925 NA non-coding downstream 678558 11376177 ~ 11376688 (-)
G156973 NA non-coding upstream 79 12061447 ~ 12064715 (-)
G157012 NA non-coding upstream 37599 12098967 ~ 12099726 (-)
G157035 LOC107737586,LOC107672037,LOC107712704 non-coding upstream 89992 12151360 ~ 12156300 (-)
G157036 NA non-coding upstream 96034 12157402 ~ 12158314 (-)
G157022 NA non-coding upstream 112018 12173386 ~ 12174187 (-)
G156985 NA other downstream 130596 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 197278 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 253614 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 308626 11741400 ~ 11746620 (-)
LOC122329329 NA other downstream 309851 11745262 ~ 11745395 (-)
G157367 NA other upstream 1079710 13141078 ~ 13217408 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 1218888 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 2161441 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 2265598 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 2508979 14570347 ~ 14589622 (-)

Expression


Co-expression Network