G157022


Basic Information

Item Value
gene id G157022
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12173386 ~ 12174187 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU232534
AAGAAAAGGTTATGTGCAAGTTCCTGAACCCAACCCATACAGAAGCCAGAGAGGCAAAGGGATGTTCCCACTGGGCCTATGGGAGAGCAGGAGTTCAGTAAGTGGACCAACTCACTCGGAGACCTTGGCCAAAAAGAGCGCTTTACGTTACATTTAAAGGTGACATCAAGCCAAGGCAGTGAATTGAAACAATTAAGTGAACATAACTGATTTCTCTCCTTTGTACTCCTTTTTTTGGCATCAGTCAGTATTTTACTTCAGAATACAAAGCAAGATGGTGCTGCCCACAGAAGAATCATGAGGACAGGAACAGAGACTGGTGTGAAGATGATTCAGAGGGAGGGAGTGACGAGTGGTGTACGGATAAATTTATACACTCAAGCTGTGCGTTACAACAACCAGGTCAAATAAGTTACAGCCAAAAATTCACATGCTCCCCGTAATCCTAAACTTAACCAGCCTGACTGATTCATACCTTAGAGAGCTCGTCCAATAGGGAAAGAGGGGTGTTTGAGATATAATACTTATAGGATTTAATAACtgatttagaaaagaaaaagaatagtTTTTTCTTTGGGCTCTCCAAGCATACTGATACTCCCCCAACCCCAGTGGGCCGCCCTCTCCCGCCTCTGACCGGTCCTCTTCTGTCTCGTCGTTGCAGCAGAGCTCGAAAACTAGTGCTTTAACATGCTTCCCCAGCTTCTTCTTGGACACCTTAGTCACGATCTCAGTCAtc

Function

GO: NA

KEGG:

id description
ko04711 Circadian rhythm - fly

RNA

RNA id representative length rna type GC content exon number start site end site
TU232534 True 739 lncRNA 0.45 2 12173386 12174187

Neighbor

gene id symbol gene type direction distance location
taf13 taf13,LOC107671955 coding downstream 107214 12065347 ~ 12066172 (-)
LOC122329006 LOC107712662,LOC107593423,LOC107699566 coding downstream 124595 12047116 ~ 12048791 (-)
si:rp71-17i16.5 si:rp71-17i16.5,LOC107712701,LOC107699595,LOC107593445 coding downstream 128081 12038033 ~ 12045305 (-)
si:rp71-17i16.6 NA coding downstream 140640 12030850 ~ 12032746 (-)
lamb2l lamb2l,LOC107672045,LOC107568836,LOC107699593,LOC107593402,LOC107712713,LOC107737682 coding downstream 143156 11995970 ~ 12030230 (-)
znf362b znf362b,LOC107593390,LOC107737708,LOC107565834,LOC107699608,LOC107712695,LOC107671956,LOC108434701 coding upstream 30146 12204333 ~ 12212104 (-)
megf6a megf6a,LOC107687467,LOC107593418,LOC107712656,LOC107671929 coding upstream 210656 12384843 ~ 12440260 (-)
her12 LOC107703051,LOC107591151,LOC107737706,LOC107593438,LOC107687468,LOC107712674 coding upstream 342735 12516922 ~ 12519193 (-)
LOC122328351 LOC107737705,LOC107712654,LOC107703076,LOC107712673,LOC107593382,LOC107593415,LOC107687469 coding upstream 347634 12521821 ~ 12531561 (-)
rnf207b rnf207b,LOC107591112,LOC107712689,LOC107593377,LOC107737674 coding upstream 371884 12546071 ~ 12553730 (-)
G157036 NA non-coding downstream 15072 12157402 ~ 12158314 (-)
G157035 LOC107737586,LOC107672037,LOC107712704 non-coding downstream 17086 12151360 ~ 12156300 (-)
G157012 NA non-coding downstream 73660 12098967 ~ 12099726 (-)
G156973 NA non-coding downstream 108671 12061447 ~ 12064715 (-)
G156978 NA non-coding downstream 112018 12055246 ~ 12061368 (-)
G157100 NA non-coding upstream 65747 12239934 ~ 12241416 (-)
G157102 NA non-coding upstream 68904 12243091 ~ 12243681 (-)
G157104 LOC107737579,LOC107565833,LOC107672049,LOC107712694,LOC107593419,LOC107687392 non-coding upstream 72030 12246217 ~ 12251981 (-)
G157106 NA non-coding upstream 78544 12252731 ~ 12252936 (-)
G157222 NA non-coding upstream 350292 12524479 ~ 12529493 (-)
G156985 NA other downstream 248736 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 315418 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 371754 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 426766 11741400 ~ 11746620 (-)
G157367 NA other upstream 966891 13141078 ~ 13217408 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 1106069 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 2048622 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 2152779 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 2396160 14570347 ~ 14589622 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G16687 NA non-coding CI01000001 null 6455569 ~ 6456382 (-)