LOC122328708 (LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419)


Basic Information

Item Value
gene id LOC122328708
gene name LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12246193 ~ 12251982 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU232604
CGGCAAGTTGACCGGCAGAATATCACTACACGTgcgttttgtttaatttatcttCGTGAAATTTTTAAGACGGTACTCCGGGATTACTCGCAGCACTCGTCTGAGTCGCACTGGATATAAGAGGGCCCCTGTAAACACAGCCCAGCGAGACATTTAACCCGAAAGACGCCTGGCTCCTGTTCGCCATGTCTGTCTCCCAAGACTCCCAATCCTACACAGCTGCTGTTTTCCTCTCAGTGCCACCCACCTGCGGGAGACCAGGTGGTTCCGTCCTTACAGAAACTGTCTGTTTATGAACACATACCCCCTTGTTCGCCCAGGAGAACAACCAAGCCCCTCCCACCCCTCCCGGACATAGGCGATTTATCCTCTGATGAAACCGAAGATGACGAGGTGGAGTTTTTCTCCAGCACCTCTGAGACCCAATATCTGGTGCCTAAAACCCCTTCCTTCCAGTACGGCTTGTCGGGGAGGCGCAGTTTTCCGGGAAACGGTCAGGTAAACTTTGCGTATCACGAAGGACATCAATGGGAGCACACAGTTACACATAACCAAGACGGACCCAAACGCCGGCTACACCGCTCATATTCTGGCCCCGCCGGATCCTTTAAAGCCGCCAACTTCAGACCGACTGGCCTTCATCATTCTTCCCACAGCCACCCGCAGGAGAAACCCGAAGTCCCGCCCCGCGTCCCAATCCGTTCTCGCTTCAGTGAAAGCGCGGACGACAGGCGGCTGTCAATCGATGACTGTGATGCAGACAAACCTCCTAAAGTGCCGCCAAGGGAGCCCATTCCTCAGGTCATACCGAGAGCCGTCAGTCCAAAAAGCCTCCCAATTTACATCAATGGGGTGATGCCTCCTACTCAGAGCTTTGCTCCTTATCCGGAGTATGTCAGTAAGGCTCAACACAAGCAGAGCTGCGAGGGCCCGCCGGCTCCCCGGAGCCCCTGTATTCTGCCCATCATGGAAGATGGAAAGAAAGTCAGCAGCACCCATTACTTCCTCCTCCCTCATCGGCCTGGCTACTTGGACAAATTTGAGAGGTTTTTCAAAGAATCCGACTCATAGTGATTTGAGTGGTTGgttgttttgcttgtttaaaGTTCGACTGAACTGATTCTTCAGTGTTACGCATTTACTGGTCTGTTTAAGAATTGGATAATTATGTATTTGGActtcacacaaagaaaaacaaaatgaattggTTTACCACTGCTGGAAACTAAAGGGCGGCTCTGAAAGTGCCCTTTGTTGGGAGGGATGCATGATTAATCAAAGTGAAACTGAAGTTGGGATTTTGACTTGAACAAAAGGTCTCACAGTCTCCCTGTGTTTCTCTGCCAAATTAAAGTCTATGGTAGATCTATGATCCGTGGTTAAAGAAGAAATGGAGGCATAAATGAAGCCATAAATATGTACGGTTCTGTAAAATAAGACTattagtaataaatacatttacattgtattacattacattgaACTATTACAATAGCAATGCTTATTTtgcttgtattattattattgtaataagcACATCAAacctggaaaaatattttaaattgcattttaaatcacaattggGTTGTTTCCTATGAATCGTGCCACCCTATTTATTGATGTCCATGTTCTTTGTTATACTATTTCCTTGCTGTATTATTGAATTAGTGTACAGTATCCTTGAATGAAGGAATAGGATTAACTGTTACACTGTTAACACTGTGTAACCAGAGTATAAGCTGGTAATATCTTTTTCTCTGTAACGTGGAATGGTAAAGTtgcatgtattgttttttatttgttttttcccctttaaatTGTACACCAACAGTACAAATTTATATGttgcttaaaaatgaaaagattagTATTAGCAATAGCACTGAATTCCTGGTAATCAAGAGCTGCCAACTGTTTTTATTAGTCGAGGGCTAGATATGATTTACACACGTGAGAAGAAGGATCAAAAAGACTCTGTACTAGTGTAGTGGCATAAATGGAAACATCAGGACACAGGGGTTAGTATTCCAACTAGTGTCCATTCAGAcggaattaaatacatttatcatttgATTTTAAGAGGATGATGCTTATAGTACAAACAGATTTACTTGTgctgaagctttttttttttttttttttttttgggtcacGTCTGTTACAAGGGTCAACATGCCACTGCCCTGCTGTTTGGTGTCAAAATGCAGGACACTGTAAATGggtagtctttttttatttataatactgtTTACCATGAATATATTGAAGCCCTTAACTAGTCCTGGCCTTGTTTCATGTGTTTCTTACCAAACGTTGACCAGacttgttgctgtttttattgtgattaGACCTTTTATAATCTTGACATTATCAGACCAGTAACTGTTTACGTTTTCAGCTACGTATGTTTTGTCCGTACAACAAAATGACTTGGTTATTTTCTGTGTGAAGGCTAACGTTAACTGACTTTGTTTCATCTGCTGAGGAAACATGCACTtctaaaatgtacagtattggTGTAGTTTTTCACACCAgactatttaaataaagtaacttATTTATAAA
>XM_043224564.1
GCTCGCAGCTTTCCGTGATGAAAGCGGCAAGTTGACCGGCAGAATATCACTACACGTgcgttttgtttaatttatcttCGTGAAATTTTTAAGACGGTACTCCGGGATTACTCGCAGCACTCGTCTGAGTCGCACTGGATATAAGAGGGCCCCTGTAAACACAGCCCAGCGAGACATTTAACCCttttttttttttttccacattgctGTTGGAAAAGTGGAGCAAAAGGCCTGACTTGGTTACCCATTCCTGGATTATGAGTTCTGCAGGTTCAAGAAAGATGGAGAACCCCACAGGCCTGGACTAGTCCCCACTCTCTTTTACATTATGGCCTCAGCCCAGCCGTACTGGGATCAGCACCATGACCACGACACCATGGATAAGCTGTTTTTCGGATTTGGTTCGGAGTCCATGGACCACAGCTTGAGAATGTATCAGCAAAACTCTGCAAACGTGGGCTTTGAAAGAAAGACGCCTGGCTCCTGTTCGCCATGTCTGTCTCCCAAGACTCCCAATCCTACACAGCTGCTGTTTTCCTCTCAGTGCCACCCACCTGCGGGAGACCAGGTGGTTCCGTCCTTACAGAAACTGTCTGTTTATGAACACATACCCCCTTGTTCGCCCAGGAGAACAACCAAGCCCCTCCCACCCCTCCCGGACATAGGCGATTTATCCTCTGATGAAACCGAAGATGACGAGGTGGAGTTTTTCTCCAGCACCTCTGAGACCCAATATCTGGTGCCTAAAACCCCTTCCTTCCAGTACGGCTTGTCGGGGAGGCGCAGTTTTCCGGGAAACGGTCAGGTAAACTTTGCGTATCACGAAGGACATCAATGGGAGCACACAGTTACACATAACCAAGACGGACCCAAACGCCGGCTACACCGCTCATATTCTGGCCCCGCCGGATCCTTTAAAGCCGCCAACTTCAGACCGACTGGCCTTCATCATTCTTCCCACAGCCACCCGCAGGAGAAACCCGAAGTCCCGCCCCGCGTCCCAATCCGTTCTCGCTTCAGTGAAAGCGCGGACGACAGGCGGCTGTCAATCGATGACTGTGATGCAGACAAACCTCCTAAAGTGCCGCCAAGGGAGCCCATTCCTCAGGTCATACCGAGAGCCGTCAGTCCAAAAAGCCTCCCAATTTACATCAATGGGGTGATGCCTCCTACTCAGAGCTTTGCTCCTTATCCGGAGTATGTCAGTAAGGCTCAACACAAGCAGAGCTGCGAGGGCCCGCCGGCTCCCCGGAGCCCCTGTATTCTGCCCATCATGGAAGATGGAAAGAAAGTCAGCAGCACCCATTACTTCCTCCTCCCTCATCGGCCTGGCTACTTGGACAAATTTGAGAGGTTTTTCAAAGAATCCGACTCATAGTGATTTGAGTGGTTGgttgttttgcttgtttaaaGTTCGACTGAACTGATTCTTCAGTGTTACGCATTTACTGGTCTGTTTAAGAATTGGATAATTATGTATTTGGActtcacacaaagaaaaacaaaatgaattggTTTACCACTGCTGGAAACTAAAGGGCGGCTCTGAAAGTGCCCTTTGTTGGGAGGGATGCATGATTAATCAAAGTGAAACTGAAGTTGGGATTTTGACTTGAACAAAAGGTCTCACAGTCTCCCTGTGTTTCTCTGCCAAATTAAAGTCTATGGTAGATCTATGATCCGTGGTTAAAGAAGAAATGGAGGCATAAATGAAGCCATAAATATGTACGGTTCTGTAAAATAAGACTattagtaataaatacatttacattgtattacattacattgaACTATTACAATAGCAATGCTTATTTtgcttgtattattattattgtaataagcACATCAAacctggaaaaatattttaaattgcattttaaatcacaattggGTTGTTTCCTATGAATCGTGCCACCCTATTTATTGATGTCCATGTTCTTTGTTATACTATTTCCTTGCTGTATTATTGAATTAGTGTACAGTATCCTTGAATGAAGGAATAGGATTAACTGTTACACTGTTAACACTGTGTAACCAGAGTATAAGCTGGTAATATCTTTTTCTCTGTAACGTGGAATGGTAAAGTtgcatgtattgttttttatttgttttttcccctttaaatTGTACACCAACAGTACAAATTTATATGttgcttaaaaatgaaaagattagTATTAGCAATAGCACTGAATTCCTGGTAATCAAGAGCTGCCAACTGTTTTTATTAGTCGAGGGCTAGATATGATTTACACACGTGAGAAGAAGGATCAAAAAGACTCTGTACTAGTGTAGTGGCATAAATGGAAACATCAGGACACAGGGGTTAGTATTCCAACTAGTGTCCATTCAGAcggaattaaatacatttatcatttgATTTTAAGAGGATGATGCTTATAGTACAAACAGATTTACTTGTgctgaagctttttttttttttttttttttttgggtcacGTCTGTTACAAGGGTCAACATGCCACTGCCCTGCTGTTTGGTGTCAAAATGCAGGACACTGTAAATGggtagtctttttttatttataatactgtTTACCATGAATATATTGAAGCCCTTAACTAGTCCTGGCCTTGTTTCATGTGTTTCTTACCAAACGTTGACCAGacttgttgctgtttttattgtgattaGACCTTTTATAATCTTGACATTATCAGACCAGTAACTGTTTACGTTTTCAGCTACGTATGTTTTGTCCGTACAACAAAATGACTTGGTTATTTTCTGTGTGAAGGCTAACGTTAACTGACTTTGTTTCATCTGCTGAGGAAACATGCACTtctaaaatgtacagtattggTGTAGTTTTTCACACCAgactatttaaataaagtaacttATTTATAAACTCA

Function

NR:

description
PREDICTED: ERBB receptor feedback inhibitor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232604 False 2565 lncRNA 0.42 2 12246217 12251978
XM_043224564.1 True 2876 mRNA 0.43 4 12246193 12251982

Neighbor

gene id symbol gene type direction distance location
zgc:154075 zgc:154075,LOC107712677,LOC107699610,LOC107593441,LOC108434639 coding upstream 10216 12229968 ~ 12235977 (+)
ttc34 ttc34,LOC107671969,LOC107737580,LOC107565827 coding upstream 17866 12221793 ~ 12228327 (+)
si:ch211-112c15.8 NA coding upstream 25257 12213370 ~ 12220936 (+)
ccdc30 ccdc30,LOC107737582,LOC107672059,LOC107699607,LOC107712696,LOC107565824 coding upstream 42074 12188494 ~ 12204119 (+)
usp21 usp21,LOC107737585,LOC107565835,LOC107593392,LOC107699606 coding upstream 59068 12183097 ~ 12187125 (+)
pax7b pax7b,LOC107672046,LOC107593389,LOC107687391,LOC107565832 coding downstream 743 12252725 ~ 12311254 (+)
kcnab2b kcnab2b,LOC107687393,LOC105894315,LOC107712982,LOC107672035,LOC107737578,LOC108434650,LOC108276490 coding downstream 80624 12332606 ~ 12384111 (+)
emc1 emc1,LOC107593385,LOC107591116 coding downstream 189074 12441056 ~ 12449532 (+)
ubr4 ubr4,LOC107687395 coding downstream 198288 12450270 ~ 12490854 (+)
iffo2a LOC107737575,LOC107712691,LOC107703080,LOC107591153,LOC107593384,LOC107687398 coding downstream 239884 12491866 ~ 12509002 (+)
G157081 NA non-coding upstream 92 12245874 ~ 12246101 (+)
G157079 NA non-coding upstream 4792 12239849 ~ 12241401 (+)
G156931 NA non-coding upstream 40798 12204256 ~ 12205395 (+)
G156933 NA non-coding upstream 71278 12174530 ~ 12174915 (+)
LOC122328486 NA non-coding upstream 208305 12030146 ~ 12037888 (+)
G157084 NA non-coding downstream 101108 12353090 ~ 12386381 (+)
G157265 NA non-coding downstream 477062 12729044 ~ 12787715 (+)
G157294 NA non-coding downstream 601259 12853241 ~ 12853832 (+)
G157317 NA non-coding downstream 737819 12989801 ~ 13040412 (+)
G157326 NA non-coding downstream 854478 13106460 ~ 13106957 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 499623 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 513832 11730980 ~ 11732361 (+)
G156586 NA other upstream 1069160 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 1160589 11077154 ~ 11085604 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 1322205 10913904 ~ 10923988 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 1842096 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 2047719 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 2351811 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 2357547 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 2428878 14680860 ~ 14686618 (+)

Expression


Co-expression Network