G157298


Basic Information

Item Value
gene id G157298
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12854297 ~ 12855852 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU232929
ACTGTCCTTCTTCTGATATTCTTCGTCTTCACCTACTTCAAAGTTCCTGAGACCAAAGGGCGGACATTTGAAGAGATCTCTGTGAGCTCCGCTCAGGGTCAGAGAAGTATACCCGAGATGATCTGAACACATTGGGGCAGATTCCCAGCTCTGAGCTCAGTGCCACGTTTATACAGTAATGTAGTGAGTGTCCTCGGCTATAGTACAGTGGGTATGTCTACAATGGCAAACTACCATATAACTCCTACTAGGAATGCTGTAGGTTATGCAGTGTTTACTATGCACTAGTGTTGTCACCATACTGGAATTTCCAAATTTGATAttcaatgccatttttttttataccgcTGTGCAAAACCGCGTTAACGTTAAGATTTCTATTAGACTCGATTATTAAGAAGTACCTTTCATGCAGCTCtaattgaatgaaaacatcctgcaaaggtTTAAACTAAAAGTGGATCGTGATATAAAATTATCGTCTCTCAAAAGATAGAGtgaactctgaatcattgaaacgagtcgtttttaaaacgaatcccaagccgtttcatgttgatgtcgaaataaacatttgcatgtttcCGTCAACTTGTTGAGAAAACCACTCAGACCAATCTCAGAAGATTAGCGTCACGGAAAGGAGGGGTTTAGAAAGATTTAGCATTGAGAGAATCAGTAAGCAAGAAAGAGTTTCTGACCTTGCACGTCTGTCAATCTGTTAATTTATCTAGCTTTACAATAATAAGGGCAccttaaaagataaaaatcacAAGGTTACAACTTTCCAATGAGGAATATTTTTATAACGCCTTGAGGTGAaaaacactggagaaaaacctAACGACACTGGAGAAAAGCTTATGGATTTATGTTTACgccaaatgctttttaaagagaagtgtcatttttattattttattacccAGAAGAGTGGTGTGACCATTATGGAGCATAATGAGCactataaacaacatttatcatttactaCAATTtagaataatgtaaaataatattttctgccTAGTTCTGTGATAAGAAGCCAAATCACAAAAGGATGTTTCAGATATTTCAGTATCGATAtgtaacaaaaactatttttggacAACACTAGTATGCAGATTTTCTGATTGCATTGAATACCTTTATGACTTATGACTACATTTGTCAAACTGTGCAATATTTGACCAGTACACTGCTTCTCAATAATTACTCATTATTTCACTGGACTTACAAAAGTGTGAATATTTGTATACAAAATTGTATTACACATTGCAaaattgctatatttatttctgaGGCCAGAACGGACACTTCTgtctaatgtaaaatgttacacTGTAATAGCGGTGTACCGCATAACAGTTTAAAACTTTGTTTGCATACTGCAGACTGCTTTTAGGTGTACTACATACTCGCgctattattttttgtacatactatattgaaacaataatatatagtataatgtGTATGGGTGTAGCatgcagtattttttgtaaTCCATTCTGAACGTTCCTACTGTCTTACTTTAGATACACTACAAACAAACTGCT

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU232929 True 1556 lncRNA 0.35 1 12854297 12855852

Neighbor

gene id symbol gene type direction distance location
phc2a LOC107737567,LOC107591107,LOC107703065,LOC107717766,LOC107593370 coding downstream 43728 12771790 ~ 12810569 (-)
ephb2a LOC107703068,LOC107593373,LOC107687404 coding downstream 129246 12674819 ~ 12725051 (-)
lrrc38a LOC107703049,LOC107737569,LOC107591108,LOC107712669,LOC107687405 coding downstream 180478 12665001 ~ 12673819 (-)
vps13d vps13d,LOC107703069,LOC107687459,LOC107712684 coding downstream 193165 12622070 ~ 12661132 (-)
rcc2 rcc2,LOC107687402,LOC107703073,LOC107712686,LOC107737572 coding downstream 292622 12555411 ~ 12561675 (-)
LOC122328520 LOC107591107,LOC107703065,LOC107737567,LOC107717766,LOC107593370 coding upstream 55218 12911070 ~ 12930813 (-)
LOC122328487 LOC107717767,LOC107687461 coding upstream 80469 12936321 ~ 12940885 (-)
spsb1 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC103042472,LOC107591103,LOC107737563 coding upstream 211475 13067327 ~ 13080224 (-)
ca6 ca6,LOC107737562,LOC107703061,LOC107591102,LOC107687477,LOC107593430 coding upstream 267596 13123448 ~ 13128638 (-)
noc2l noc2l,LOC107737559,LOC107687416,LOC107716108,LOC107703058 coding upstream 520592 13376444 ~ 13401670 (-)
G157295 NA non-coding downstream 796 12853239 ~ 12853501 (-)
G157255 NA non-coding downstream 234240 12619019 ~ 12620057 (-)
G157224 NA non-coding downstream 320318 12533758 ~ 12533979 (-)
G157222 NA non-coding downstream 324804 12524479 ~ 12529493 (-)
G157106 NA non-coding downstream 601361 12252731 ~ 12252936 (-)
G157349 NA non-coding upstream 174014 13029866 ~ 13040397 (-)
G157353 NA non-coding upstream 207802 13063654 ~ 13063904 (-)
G157357 NA non-coding upstream 247259 13103111 ~ 13103551 (-)
G157355 NA non-coding upstream 249909 13105761 ~ 13107193 (-)
G157360 NA non-coding upstream 260058 13115910 ~ 13116131 (-)
G156985 NA other downstream 929647 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 996329 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 1052665 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 1107677 11741400 ~ 11746620 (-)
G157367 NA other upstream 285226 13141078 ~ 13217408 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 424404 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 1366957 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 1471114 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 1714495 14570347 ~ 14589622 (-)

Expression


Co-expression Network