G157329


Basic Information

Item Value
gene id G157329
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13114958 ~ 13115174 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU232971
AACGAGAGCTTTTTTAAAGCCGCACTCGCAGACCTGACTGTGAGGACACACACCTCACCACAATCCCCAGTGGGCTGTTCAGCCCTCGACCCGCTGAAATAAACAGCTGAGGATCTCTGTTTAAGTTGATGAGGTCCAATCAATTTGATTAATGAGTTGCTGAAGGAGGAATAGGAATGAGAGAATCTGCAGTGCTGCACTGCAGGAGGGAGCAGAT

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU232971 True 217 lncRNA 0.49 1 13114958 13115174

Neighbor

gene id symbol gene type direction distance location
gpr157 gpr157,LOC107737701,LOC107703047,LOC107591148,LOC107687411,LOC107716105,LOC107593368 coding upstream 1929 13109054 ~ 13113029 (+)
rap1gapa rap1gap,LOC107716101,LOC107737565,LOC108434374,LOC107703042,LOC108276112,LOC107593412,LOC107687462 coding upstream 77405 12962295 ~ 13037553 (+)
LOC122329270 slc2a1a,LOC107703064,LOC107591105,LOC107593369,LOC107687407,LOC107737564,LOC107716100 coding upstream 161943 12944258 ~ 12953015 (+)
eif4g3b LOC107737566,LOC107703066 coding upstream 345028 12734988 ~ 12769930 (+)
lactbl1a LOC107737568,LOC107591149,LOC108434488 coding upstream 381212 12727916 ~ 12733746 (+)
LOC122329098 slc2a5 coding downstream 1819 13116993 ~ 13123560 (+)
eno1a eno1a,eno1,LOC107703060,LOC107591100,LOC107716106,LOC107737561,LOC107593367,LOC108434336,LOC103038459,LOC103151087 coding downstream 16843 13132017 ~ 13141968 (+)
rerea rerea,LOC107737560,LOC107703059,LOC107591099,LOC107593365,LOC107687412 coding downstream 32531 13147705 ~ 13284874 (+)
samd11 samd11,LOC107593364,LOC107716107,LOC107687414,LOC107737557 coding downstream 206357 13321531 ~ 13376301 (+)
klhl17 klhl17,LOC107737556,LOC107687417,LOC107572648 coding downstream 286843 13402017 ~ 13417254 (+)
G157326 NA non-coding upstream 8001 13106460 ~ 13106957 (+)
G157317 NA non-coding upstream 74546 12989801 ~ 13040412 (+)
G157294 NA non-coding upstream 261126 12853241 ~ 12853832 (+)
G157265 NA non-coding upstream 327243 12729044 ~ 12787715 (+)
G157084 NA non-coding upstream 728577 12353090 ~ 12386381 (+)
G157408 her9,LOC107716081,LOC107593950,LOC107687478,LOC107737700,LOC107703052 non-coding downstream 296496 13411670 ~ 13495376 (+)
G157410 LOC107737553,LOC107703053,LOC107591147,LOC107687419,LOC107716113 non-coding downstream 323101 13438275 ~ 13441951 (+)
G157417 NA non-coding downstream 686246 13801420 ~ 13882959 (+)
G157423 LOC106566923 non-coding downstream 743791 13858965 ~ 13862206 (+)
G157459 NA non-coding downstream 782657 13897831 ~ 13901092 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 862976 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 1368388 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 1382597 11730980 ~ 11732361 (+)
G156586 NA other upstream 1937925 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 2029354 11077154 ~ 11085604 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 978904 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 1184527 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 1488619 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 1494355 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 1565686 14680860 ~ 14686618 (+)

Expression


Co-expression Network