G157364


Basic Information

Item Value
gene id G157364
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13119998 ~ 13120516 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233022
GTGGGTTAAAGTTAGGATTCAGTtcaccaaaacataaaaactgtttaacaCTACACTTacgttttcataaaaaatgcattaaatagaatcatctgatgttttaaagcGGTGCTTACGGCATTGACTCCTGACAGTTGTTGGCCCATGTTCATGAAGATTACAGACAGCAGCTGCCAGCGCAGTGAGCGGAAGGTGAAGAGGTTGAGCACAGAGAGTTGACCTTCTGCTCGCTCCGACTGTTCCTCCACACGCATCTCACACAGCTCCTCATCCACATCCTCACAGCCACGCAGCTTCTGCAACCCTAAAACACATCAGAgacttcatttaataaatagctCCCATGTTGACATTCAGATCAACGGCACTATAATGAGTGTGATAgtgctcacccaaaaatgaaatatcctcctttgtgtttggATGAACAAGAAATTCATAGAAATTCAAGTAAGCAAGACACTAATTTTGAGTAGCTGACATTTCAGACACAATATTGATGTTATGGTTGCTTTTTTG

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0006814 sodium ion transport biological_process
GO:0070279 vitamin B6 binding molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function

KEGG:

id description
ko00450 Selenocompound metabolism
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU233022 True 519 lncRNA 0.41 1 13119998 13120516

Neighbor

gene id symbol gene type direction distance location
spsb1 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC103042472,LOC107591103,LOC107737563 coding downstream 39774 13067327 ~ 13080224 (-)
LOC122328487 LOC107717767,LOC107687461 coding downstream 179113 12936321 ~ 12940885 (-)
LOC122328520 LOC107591107,LOC107703065,LOC107737567,LOC107717766,LOC107593370 coding downstream 189185 12911070 ~ 12930813 (-)
phc2a LOC107737567,LOC107591107,LOC107703065,LOC107717766,LOC107593370 coding downstream 309429 12771790 ~ 12810569 (-)
ephb2a LOC107703068,LOC107593373,LOC107687404 coding downstream 394947 12674819 ~ 12725051 (-)
ca6 ca6,LOC107737562,LOC107703061,LOC107591102,LOC107687477,LOC107593430 coding upstream 2932 13123448 ~ 13128638 (-)
noc2l noc2l,LOC107737559,LOC107687416,LOC107716108,LOC107703058 coding upstream 255928 13376444 ~ 13401670 (-)
LOC122328822 LOC107703053,LOC107737553,LOC107687419,LOC107591147 coding upstream 316026 13436542 ~ 13442457 (-)
her9 her9,LOC107716081,LOC107593950,LOC107687478,LOC107737700,LOC107591146,LOC107703052 coding upstream 373065 13493581 ~ 13495390 (-)
LOC122328742 rnf223,LOC107673070,LOC107716082,LOC107591144,LOC107593948,LOC107737699,LOC107687479 coding upstream 658509 13779025 ~ 13783742 (-)
G157363 NA non-coding downstream 445 13119183 ~ 13119553 (-)
G157361 NA non-coding downstream 1830 13117380 ~ 13118168 (-)
G157360 NA non-coding downstream 3867 13115910 ~ 13116131 (-)
G157355 NA non-coding downstream 12805 13105761 ~ 13107193 (-)
G157357 NA non-coding downstream 16447 13103111 ~ 13103551 (-)
G157365 NA non-coding upstream 1297 13121813 ~ 13122026 (-)
G157765 NA non-coding upstream 313239 13433755 ~ 13435861 (-)
G157799 NA non-coding upstream 621741 13742257 ~ 13747171 (-)
G157813 NA non-coding upstream 652259 13772775 ~ 13773308 (-)
G157826 NA non-coding upstream 703477 13823993 ~ 13825589 (-)
G156985 NA other downstream 1195348 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 1262030 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 1318366 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 1373378 11741400 ~ 11746620 (-)
G157367 NA other upstream 20562 13141078 ~ 13217408 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 159740 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 1102293 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 1206450 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 1449831 14570347 ~ 14589622 (-)

Expression


Co-expression Network