G157367


Basic Information

Item Value
gene id G157367
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13141078 ~ 13217408 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233029
atttttttttttatatTTTTACCCACACTCTTCCATTTTAATAgggataatttttttattatgccaCGCATATAGAACTAACACTTCTCAAAAGCAACACAATGCACACATACTCATGCTGCACACCGCAGCACAGTGAACAGCTTTAGCTCTTCGCTAAAATACTCTGTGGAGCACCAGAATCACTACAACTCACAAGAAGCTAAACAAAGTTCTCTCACacaacacagagacacaatAAAGGACTGATGCTATTTGGATACCAAAGCATATGTGTGGATGGGGACAAGGGCTGTCACGGAGAGCAGTGTTCTGTGCCATTGACTACAGATCTGGACCTTTGAATTCACTGCGTTTCCATCTAGTCTCCATTCTACAGGAGCTGGCGTTGCGTGGCTTTATGTGTAGGAGAGTAAGCACAATGAACACACTAAGACTGATGACGGCTGCCGCTTCAGATGGGCCTCCTGAAGTTCTTGCCAGCGAAACGAGCCTTGTCGCCAAGCTCCTCTTCAATCCTCAGCTGATTGTACTTGGCCAGACGCTCAGACCTGCAGGGAGCACCAGTCTTGa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233029 True 573 TUCP 0.45 3 13141078 13217408

Neighbor

gene id symbol gene type direction distance location
ca6 ca6,LOC107737562,LOC107703061,LOC107591102,LOC107687477,LOC107593430 coding downstream 12440 13123448 ~ 13128638 (-)
spsb1 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC103042472,LOC107591103,LOC107737563 coding downstream 60854 13067327 ~ 13080224 (-)
LOC122328487 LOC107717767,LOC107687461 coding downstream 200193 12936321 ~ 12940885 (-)
LOC122328520 LOC107591107,LOC107703065,LOC107737567,LOC107717766,LOC107593370 coding downstream 210265 12911070 ~ 12930813 (-)
phc2a LOC107737567,LOC107591107,LOC107703065,LOC107717766,LOC107593370 coding downstream 330509 12771790 ~ 12810569 (-)
noc2l noc2l,LOC107737559,LOC107687416,LOC107716108,LOC107703058 coding upstream 159036 13376444 ~ 13401670 (-)
LOC122328822 LOC107703053,LOC107737553,LOC107687419,LOC107591147 coding upstream 219134 13436542 ~ 13442457 (-)
her9 her9,LOC107716081,LOC107593950,LOC107687478,LOC107737700,LOC107591146,LOC107703052 coding upstream 276173 13493581 ~ 13495390 (-)
LOC122328742 rnf223,LOC107673070,LOC107716082,LOC107591144,LOC107593948,LOC107737699,LOC107687479 coding upstream 561617 13779025 ~ 13783742 (-)
arhgef19 arhgef19,LOC107673086,LOC107737548,LOC107591090,LOC107687425,LOC107716118 coding upstream 617648 13835056 ~ 13851039 (-)
G157365 NA non-coding downstream 19052 13121813 ~ 13122026 (-)
G157364 NA non-coding downstream 20562 13119998 ~ 13120516 (-)
G157363 NA non-coding downstream 21525 13119183 ~ 13119553 (-)
G157361 NA non-coding downstream 22910 13117380 ~ 13118168 (-)
G157360 NA non-coding downstream 24947 13115910 ~ 13116131 (-)
G157765 NA non-coding upstream 216347 13433755 ~ 13435861 (-)
G157799 NA non-coding upstream 524849 13742257 ~ 13747171 (-)
G157813 NA non-coding upstream 555367 13772775 ~ 13773308 (-)
G157826 NA non-coding upstream 606585 13823993 ~ 13825589 (-)
G157863 NA non-coding upstream 840429 14057837 ~ 14075937 (-)
G156985 NA other downstream 1216428 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 1283110 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 1339446 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 1394458 11741400 ~ 11746620 (-)
LOC122329329 NA other downstream 1395683 11745262 ~ 11745395 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 62848 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 1005401 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 1109558 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 1352939 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 1467482 14684890 ~ 15301682 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G17950 NA non-coding CI01000001 null 7586506 ~ 7588473 (-)
bowfin (Amia calva) AMCG00016859 NA misc CM030122.1 CM030122.1 32497507 ~ 32507319 (-)
mexican tetra (Astyanax mexicanus) G15023 NA non-coding NC_035898.1 CM008301.1 31529337 ~ 31621297 (-)