G157496


Basic Information

Item Value
gene id G157496
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14085594 ~ 14087258 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233221
cacagaaaaaattTATTGTTGCAAATACAAAAGTCAAAAACGTGGCAACACCGACCTTATCAGggcatctttttttaaaccaaaacacAATAATCTgccctttttttataaaacatggccattttgaatatttgtgctacagtaaaaacaacttataatataaaaacatgatcgtgtttaaataatataagatGAAATACAGAGGTGGAGCGTGTGGTCTGCGTCAAACAGACAGTATCATACAAAGACAATTCAAGTTCAAGTTCAACCAAATATACACATAGATGACAGTACTAGTAATTGTCTGCATAAatacagcagagagaaagacaattACCGAACAAGATAAATCTCTTTGGTTCATTCTGTGGTGTTAATTCTGCTCCTCGCGTATCATAAAACCCCATCATGTACACTTGAAGCAGACATAAGGCCACTTTAAGATTGAATACAGGAAGTGTCGAGATAAGCATGTAGTTGTAATTCACATaaaacagtgttaaaaacagGTACTTTTTTAAGTAATGCCATGATAATGCACCTCAGcgacagtatatatataaaaaaaaaacctgcagttTATAAACTAGGCCTTTTGTAAAGTAATAAGACTGATCAGAAACAAGGACGAATGGGTGCTTGGtgtcacatttgcatttatggAAAACGTATGCATAGCATGTTGGATAAGACTGTGTATTCCTGCGGCAGTTTTCGCCTGAATCtggaatacattaaaaacactagTCTTTCTTTAAAGTATGAATATGAATGTTGAAGATTAAAAATGTGAGGTTGAGTTCAGGTAGGACTTTGCATAGAAAGACTGGCCTGaaagtttattgtgctttatgtTACTTGCTGAGCTGTATAACGTAATTGCAGATTACGGATAACCTGCCCTATGAACGGTTTTAATCTCCCAAATAatgtcactttaaatgtaaaaaaaaatgcttataacaaaacaagtaaaaaaaggaatataaaATCTGTAAATTGTTATTGCAAAATTCAAGCTCAATGACTAGGACAAAGCTGGCTTCTGTTCTAACTGTTTGAGGTCCTCAAACCTTGTAGCAGAACCGCATATACTTCGTGCTGAGCAGAATTATGAGCTTTCGTGTTTGTTTTCAGGTCAGAAGGCGGAGTCTCCTGTCATATGAGCTGCTCGCGTGTGATTGGCAGTCAGTGCTACACAACATGGAGGTTGGCCCTGGTCTGGTGGTGTAGGGATTACGGACCCCTGAGTTGTTCGAGTCTGCTGTAGACATCGTCAGCCTGACTTAACTCTTCAAATACTGGGATGAGGTGAAGCAGCTCGGTGTCCTCTGAATCATCAAACCAGGACAATACAGG
>TU233222
cacagaaaaaattTATTGTTGCAAATACAAAAGTCAAAAACGTGGCAACACCGACCTTATCAGggcatctttttttaaaccaaaacacAATAATCTgccctttttttataaaacatggccattttgaatatttgtgctacagtaaaaacaacttataatataaaaacatgatcgtgtttaaataatataagatGAAATACAGAGGTGGAGCGTGTGGTCTGCGTCAAACAGACAGTATCATACAAAGACAATTCAAGTTCAAGTTCAACCAAATATACACATAGATGACAGTACTAGTAATTGTCTGCATAAatacagcagagagaaagacaattACCGAACAAGATAAATCTCTTTGGTTCATTCTGTGGTGTTAATTCTGCTCCTCGCGTATCATAAAACCCCATCATGTACACTTGAAGCAGACATAAGGCCACTTTAAGATTGAATACAGGAAGTGTCGAGATAAGCATGTAGTTGTAATTCACATaaaacagtgttaaaaacagGTACTTTTTTAAGTAATGCCATGATAATGCACCTCAGcgacagtatatatataaaaaaaaaacctgcagttTATAAACTAGGCCTTTTGTAAAGTAATAAGACTGATCAGAAACAAGGACGAATGGGTGCTTGGtgtcacatttgcatttatggAAAACGTATGCATAGCATGTTGGATAAGACTGTGTATTCCTGCGGCAGTTTTCGCCTGAATCtggaatacattaaaaacactagTCTTTCTTTAAAGTATGAATATGAATGTTGAAGATTAAAAATGTGAGGTTGAGTTCAGGTAGGACTTTGCATAGAAAGACTGGCCTGaaagtttattgtgctttatgtTACTTGCTGAGCTGTATAACGTAATTGCAGATTACGGATAACCTGCCCTATGAACGGTTTTAATCTCCCAAATAatgtcactttaaatgtaaaaaaaaatgcttataacaaaacaagtaaaaaaaggaatataaaATCTGTAAATTGTTATTGCAAAATTCAAGCTCAATGACTAGGACAAAGCTGGCTTCTGTTCTAACTGTTTGAGGTCCTCAAACCTTGTAGCAGAACCGCATATACTTCGTGCTGAGCAGAATTATGAGCTTTCGTGTTTGTTTTCAGGTCAGAAGGCGGAGTCTCCTGTCATATGAGCTGCTCGCGTGTGATTGGCAGTCAGTGCTACACAACATGGAGGTTGGCCCTGGTCTGGTGGTGTAGGGATTACGGACCCCTGAGTTGTTCGAGTCTGCTGTAGACATCGTCAGCCTGACTTAACTCTTCAAATACTGGGATGAGGTGAAGCAGCTCGGTGTCCTCTGAATCATCAAACCAGGACAATACAGGAACCTGTTAACGGCACACAAAGTATTATACACCGCTAATCTACTGGTTTCATGTAATACTTAGTCATTTCAGGACCATTTAAATCTACAGGCTTtatgtatatatcattttatatctAGATAATTTTGGATGGGGGTACGTCAACATTTTGTCACACATACTGCAGACAATATTCTGCAATTAAttccaaatataatttttatcagacattgtaaaatatgtccacttttaaacatttgttaatatAAACATGCTATTTTATACACTAGATATATTTGCATCTAAATAACAATACATACATTAGTG

Function

GO: NA

KEGG:

id description
ko00515 Mannose type O-glycan biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU233221 False 1359 lncRNA 0.37 1 14085594 14086952
TU233222 True 1665 lncRNA 0.36 1 14085594 14087258

Neighbor

gene id symbol gene type direction distance location
nckap5l LOC107737531,LOC107673071,LOC107716135,LOC107591078,LOC107687440,LOC107593921 coding upstream 424 14057970 ~ 14085170 (+)
LOC122329330 NA coding upstream 28773 14056685 ~ 14056821 (+)
kansl2 kansl2,LOC107687436,LOC107716132,LOC107737532,LOC107591080,LOC107673082,LOC107593923 coding upstream 29027 14050691 ~ 14056567 (+)
LOC122329331 NA coding upstream 31094 14054364 ~ 14054500 (+)
mlh3 LOC107673081,LOC107591079,LOC107737666,LOC107687437 coding upstream 35066 14044783 ~ 14050528 (+)
olfml3a olfml3a,LOC107673069,LOC107737697,LOC107593917,LOC107687444,LOC107716140,LOC107591119 coding downstream 54626 14141884 ~ 14149209 (+)
klhl21 klhl21,LOC107687446,LOC107593916,LOC107716146,LOC107591074,LOC107673096,LOC107737529 coding downstream 130249 14217507 ~ 14225401 (+)
nol9 nol9,LOC107591073,LOC107737527,LOC107687449,LOC107716145,LOC107593915,LOC107673104 coding downstream 145843 14233101 ~ 14239250 (+)
casp9 casp9,LOC107673102,LOC107737696,LOC107687452,LOC107716147,LOC107593914 coding downstream 153487 14240745 ~ 14245704 (+)
arhgap4a arhgap4a,LOC107737525,LOC107673101,LOC107591071,LOC107716143,LOC107687450,LOC107593913 coding downstream 159184 14246442 ~ 14257712 (+)
G157481 NA non-coding upstream 45395 13981975 ~ 14040199 (+)
G157479 NA non-coding upstream 130048 13955112 ~ 13955546 (+)
G157476 LOC107591085,LOC107673100,LOC107737541,LOC107687430,LOC107593930,LOC107716125 non-coding upstream 132122 13944085 ~ 13953472 (+)
G157475 LOC107737541,LOC107591085,LOC107673100,LOC107593930,LOC107716125,LOC107687430 non-coding upstream 141675 13943589 ~ 13943919 (+)
G157474 NA non-coding upstream 143162 13942021 ~ 13942432 (+)
G157494 NA non-coding downstream 323 14087581 ~ 14088519 (+)
G157521 NA non-coding downstream 60152 14147410 ~ 14147616 (+)
G157531 NA non-coding downstream 109173 14196431 ~ 14196696 (+)
LOC122328961 NA non-coding downstream 177406 14264664 ~ 14273735 (+)
G157551 NA non-coding downstream 286319 14373577 ~ 14375050 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 1833612 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 2339024 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 2353233 11730980 ~ 11732361 (+)
G156586 NA other upstream 2908561 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 2999990 11077154 ~ 11085604 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 6820 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 212443 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 516535 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 522271 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 593602 14680860 ~ 14686618 (+)

Expression


Co-expression Network