G15794


Basic Information

Item Value
gene id G15794
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5061218 ~ 5064704 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17650
TCTGCATCTTATTCACATGAAAGCATAAAAGATTCAAAGTAGTATTTCTCTCAAGCTATTGCTTTGATTGCATGTGTGATCTTAACGATATTCCGCCATTTTGGGAAGTAGCTACAGTATTCGTTATAAAACACAGCATGAAGGAAACACACCAACATAAAACACAGCGAGAGAGCAATCTTCAAACCATATAAACTCAGGTGGGAACTGTGATTCAACTACATTCATCATCCAGCACTTGAGGAACACATCTTGATGGGAGTCTTTAATCTGAAAGGGGCTAATTAAATAAGCATGATGTCATTTCCATTATAGTCTAACAAAACAACAAGATAACGCTGTAAAAAAAAAAAGAAGTGAAGAACAGGTCACCAACTACTTGATTTCTTTAAAGATACATTTTATTTTTCCTTGTAAAACAAATTTTACAAAAATCAGAATAGCGTAATTAAAACAAACATTTATTTTGGATAAATTATGATATAGACTGAAAGGCTACAGATTAGGATGGAGATACACGCAATAAAAATAGTCATATGAAGCTGAGAAAGCTATGGATGGTGTGCACTGAATTCAGCTCGTTTTTACCATTCTAATGGCTCAACGGACTGCATTTAAAAAGGCATCTATAAGCATCAAAATATTCTTAAAAAATGCACACATGAAGCATCACAGAGGTCAATAATAAGTTTTCACTAGCTCACTTCTGACATCACTCATCCTGAGCCCGAGACTCCACCCACCGACGTACTTCGCACCACGTACATGAAAGCATGCCAACCATGAAAGAGGTTCAGTACAACCATAGAAAAAGTCATCTTAGTTCAAATGCTCAGACAGGAAAAAGCTGATTTACTAGACTGAATCAAGAAATAACTGCACGGAAAGTGGGAGAAAGTAGCGTACTAGAGCTATGTAACGTACAGTTGACGCAGCAAGGAAATCACGTGACTGAACTGCAGCCACAACAATCCAGTGCAGTTCATGACGACAAGCGTATATGTTCATTATAAGCCTGTGTTTTCAACGGTCAATGCAGCTGGGATGAGATCATGTACATTAAAAGTCACAAAAATTAGTTTATTTGGGAGTAAATGAGCAGTTACGTTCTTCAAATGCATTTTGAAAAATTTTAAGGTGCCCATAAAGTGAAGTACAGAGCCTACAGTATAATCTGTATTTTTTTGGGCAAGTCATTTTCGTCCTTTGTTGTACGTTGAAGGTCAACTATAACAAAACGGTTTCGGCAAAAAGGCTGCAAAGCTATAATTGAAACATCGATCAGGATAAGGCCAAACCGTACAGTTTTAGAATAGATCTGATGATACTTTACAGATTTTGTTCGGAGATATGGTATTTACAAGCCGAGAGACATAATAAACATCCAAAACACTCTTTGAGTATTGTGGGAAATAAATTCTACTGCTCCTCGTTAAGAAAAACAGATAACAGACACATTCACCAGCAGGCGAAAGAGCTCAGTCTTCACCTGATGGAGCTTCCTCCTCAGAAACATCGTCTTTTTCCTCTTTATCATTCTCATTTTCCTTCTCCTCCTCTTCCTCCTCCTCCTTTTCTCCGTTGTCATTGTTTTCCTCGCCTTCGGCGCCGCTTTCGTCATCCTGTGTCTTCTTGGGGGCGGCCGACTCTTTCCTGTCTTCCTCTTGCGCCTCTTCCTCTTCCTCCTTGTTGCTCTCGATATCTTCATCTTCGGCTTTAGGCGAGGCCTTTTTCACAACTCTCTTAACCTTTGTCTGACGTTTTCCTCTCCTCTTTTTGGGCCCTCGGGTTGCTGAAGCCCTTATCTTGGGTTTAGGGGATTTCTTGTCTTTGCTTCTCCTGCTCACTTTCGAGTTCTTCCGTTTGGGTCGGCCATAATCACTGTCATCATCATCATCCTCAACCATGAAGTCTTCGTCGCTGCCCGAGTCCTCGCCAGTGTAAACGTCACTGTCATCTTCCTCCTCTTCTTCCTCTCCCTCCTCATCCTCACTTCCTCCATCCCCAAGAAGAATCTCCCTCTGTTTGGACGCAGCTTTAGTGGCAGCCTGACGCACCTGCCGGCCCTTCTTCCTCACAACTTTTCCATCATCGTCACTGTCATCTGCAGCCCTTTTCCGTTTAGCTGTTGCCTGTCTCCCCCTGCTGGCCTCTTTAGCATCAAAATCACTGTCA
>TU17651
TCTGCATCTTATTCACATGAAAGCATAAAAGATTCAAAGTAGTATTTCTCTCAAGCTATTGCTTTGATTGCATGTGTGATCTTAACGATATTCCGCCATTTTGGGAAGTAGCTACAGTATTCGTTATAAAACACAGCATGAAGGAAACACACCAACATAAAACACAGCGAGAGAGCAATCTTCAAACCATATAAACTCAGGTGGGAACTGTGATTCAACTACATTCATCATCCAGCACTTGAGGAACACATCTTGATGGGAGTCTTTAATCTGAAAGGGGCTAATTAAATAAGCATGATGTCATTTCCATTATAGTCTAACAAAACAACAAGATAACGCTGTAAAAAAAAAAAGAAGTGAAGAACAGGTCACCAACTACTTGATTTCTTTAAAGATACATTTTATTTTTCCTTGTAAAACAAATTTTACAAAAATCAGAATAGCGTAATTAAAACAAACATTTATTTTGGATAAATTATGATATAGACTGAAAGGCTACAGATTAGGATGGAGATACACGCAATAAAAATAGTCATATGAAGCTGAGAAAGCTATGGATGGTGTGCACTGAATTCAGCTCGTTTTTACCATTCTAATGGCTCAACGGACTGCATTTAAAAAGGCATCTATAAGCATCAAAATATTCTTAAAAAATGCACACATGAAGCATCACAGAGGTCAATAATAAGTTTTCACTAGCTCACTTCTGACATCACTCATCCTGAGCCCGAGACTCCACCCACCGACGTACTTCGCACCACGTACATGAAAGCATGCCAACCATGAAAGAGGTTCAGTACAACCATAGAAAAAGTCATCTTAGTTCAAATGCTCAGACAGGAAAAAGCTGATTTACTAGACTGAATCAAGAAATAACTGCACGGAAAGTGGGAGAAAGTAGCGTACTAGAGCTATGTAACGTACAGTTGACGCAGCAAGGAAATCACGTGACTGAACTGCAGCCACAACAATCCAGTGCAGTTCATGACGACAAGCGTATATGTTCATTATAAGCCTGTGTTTTCAACGGTCAATGCAGCTGGGATGAGATCATGTACATTAAAAGTCACAAAAATTAGTTTATTTGGGAGTAAATGAGCAGTTACGTTCTTCAAATGCATTTTGAAAAATTTTAAGGTGCCCATAAAGTGAAGTACAGAGCCTACAGTATAATCTGTATTTTTTTGGGCAAGTCATTTTCGTCCTTTGTTGTACGTTGAAGGTCAACTATAACAAAACGGTTTCGGCAAAAAGGCTGCAAAGCTATAATTGAAACATCGATCAGGATAAGGCCAAACCGTACAGTTTTAGAATAGATCTGATGATACTTTACAGATTTTGTTCGGAGATATGGTATTTACAAGCCGAGAGACATAATAAACATCCAAAACACTCTTTGAGTATTGTGGGAAATAAATTCTACTGCTCCTCGTTAAGAAAAACAGATAACAGACACATTCACCAGCAGGCGAAAGAGCTCAGTCTTCACCTGATGGAGCTTCCTCCTCAGAAACATCGTCTTTTTCCTCTTTATCATTCTCATTTTCCTTCTCCTCCTCTTCCTCCTCCTCCTTTTCTCCGTTGTCATTGTTTTCCTCGCCTTCGGCGCCGCTTTCGTCATCCTGTGTCTTCTTGGGGGCGGCCGACTCTTTCCTGTCTTCCTCTTGCGCCTCTTCCTCTTCCTCCTTGTTGCTCTCGATATCTTCATCTTCGGCTTTAGGGGATTTCTTGTCTTTGCTTCTCCTGCTCACTTTCGAGTTCTTCCGTTTGGGTCGGCCATAATCACTGTCATCATCATCATCCTCAACCATGAAGTCTTCGTCGCTGCCCGAGTCCTCTATGAGCAGATGAGGGGAAGTATAAAATATCAAGTATCTCACGGTTAGCTAACATGCGAATGTCAATGTTCTTGAAATAGTTTGACTCTGACATAATACTGTTTGTACCGCCAGTGTAAACGTCACTGTCATCTTCCTCCTCTTCTTCCTCTCCCTCCTCATCCTCACTTCCTCCATCCCCAAGAAGAATCTCCCTCTGTTTGGACGCAGCTTTAGTGGCAGCCTGACGCACCTGCCGGCCCTTCTTCCTCACAACTTTTCCATCATCGTCACTGTCATCTGTGTGTCAAAAGAGCAGGTACATGGTTAATTAACACAAGCTGAAGGTTTGTTAAAATTATGCATTAATATGCAAAATGCATAAACACTAAATCACAACACAGGCATGAAAAAATTGACTGCGCTTTTGCTTAAGTGAATAAGAGCATGTTAATTAGCAGATGAGAGCAGACTGACATTGTAAAAAGGAACAAAAGAATAAAATTGCATTTTAATAGCATAAAAGCAAACGAAGAAGAGCATGAAACTGAAACACTTTTATATACATGTTATATACTGTTTAATAAATATAAAATATTAATCACTAATTTGTCAGTAGCCATATAGGCAAAGTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17650 False 2175 TUCP 0.41 4 5061218 5064704
TU17651 True 2455 TUCP 0.34 2 5061218 5063929

Neighbor

gene id symbol gene type direction distance location
CI01000001_05051664_05059659 MFSD4B coding upstream 1278 5051529 ~ 5059940 (+)
CI01000001_04993860_04998535 NA coding upstream 62457 4993860 ~ 4998761 (+)
CI01000001_04976994_04988795 NFASCB coding upstream 72136 4976347 ~ 4989082 (+)
CI01000001_04962494_04971921 NA coding upstream 88987 4962494 ~ 4972231 (+)
CI01000001_04950531_04960550 NACA, NACA.2 coding upstream 100523 4950531 ~ 4960695 (+)
CI01000001_05071017_05075175 NA coding downstream 4599 5069303 ~ 5075753 (+)
CI01000001_05075984_05079729 NA coding downstream 11280 5075934 ~ 5079731 (+)
CI01000001_05223340_05229184 IDH3G coding downstream 158636 5223340 ~ 5229659 (+)
CI01000001_05270301_05279405 AVPR2AB coding downstream 205597 5270301 ~ 5280807 (+)
CI01000001_05279884_05287123 NA coding downstream 215133 5279837 ~ 5287698 (+)
G15817 NA non-coding upstream 36 5060807 ~ 5061182 (+)
G15812 NA non-coding upstream 19653 5041366 ~ 5041565 (+)
G15800 NA non-coding upstream 55181 5005822 ~ 5006037 (+)
G15798 NA non-coding upstream 57828 5003170 ~ 5003390 (+)
G15789 NA non-coding upstream 125228 4935371 ~ 4935990 (+)
G15796 NA non-coding downstream 5768 5074401 ~ 5074805 (+)
G15875 NA non-coding downstream 118368 5183072 ~ 5183360 (+)
G15877 NA non-coding downstream 131957 5196661 ~ 5196928 (+)
G15878 NA non-coding downstream 132321 5197025 ~ 5197241 (+)
CI01000001_03618075_03620436 NA other upstream 1439767 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3390214 1667762 ~ 1671167 (+)
G13051 NA other upstream 4016066 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4569161 483853 ~ 488825 (+)
G12614 NA other upstream 4750277 309144 ~ 310941 (+)
G15995 NA other downstream 647181 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2467868 7531541 ~ 7540586 (+)
G17234 NA other downstream 2967420 8032124 ~ 8032483 (+)
G17353 NA other downstream 4151318 9216022 ~ 9228859 (+)

Expression


Co-expression Network