G157608


Basic Information

Item Value
gene id G157608
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14564340 ~ 14566056 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233363
atttgttttgagaGAAATTAAagaatattcacatttatttactcTAATTACCTTGTAGatcatctttttttcctttttgcatgTTTGCAACCGAAACGTGCATGTTAATTTCATAGTCaataaatttcaataaatatcatttattggTCACACATTGTCTGTAGATACTACTACTGTAAAGGCCACACACAGGAAACAATGGTCATATGTAGCATTCTGTTTAAATCCAGCCACAGtgattttgcactttttttgtgaACATTGCAAATTTGTGTACACATCCAAAATCATTCACGActcattttcttcaaaaaatagATCTGTGCTATGgcatacattaataaataatgtataaataagttatgctgaaaataaataaataatgctcaCAAAGCATATCTCAATCAAGCTGACCTTACGATGGCAGCGAAAATCAAAGTAGAAAATTcctataaaatattaagttaattcaaatgaaagcactgattatttaaatctaatttgcaattcatacagaaatgtaaatgtcactTTGATTCTTATGTGCACTCCTAAAACCCAGCCAGCGATTCAAAAAACTTAACACTAAGTTATGAAAATATTCATCACAATATCTAGTATCTCAGAATAACTTGTTAAACTGTCCTCATGCTGCAATATCACATATGAAACTTTTTCAGACACAAAGAGGAATCCGGCGGACAACGATGGAGATATCCACTTCAATCTAATGCTCTAATATTTCATGCACTTTTACTGCTAATGACATCGTGTAGCTTTCACAGTTGACACcagtgcatttaatattttctgttttgttttctatggCACCATTCGTAAAACTAGCTGAATGCTGTTAAAGTTTTACCGGTGTACAAAAGCAATGTATATGCGAGACCTCCTTCACGCTACAGGACAAACGCATGGCACATCGTAAAAAGCTAAGGTGAGCTTAAACACGACAGCATGCACCGAAGATCCACATCATGCTGGAAGGACACGGTCACTCAGttcagagagacagacggaAGACTTCAGGTTAACAGCACATTCACTCCCGCTCTGGAGTGCCAAACAACTggaggaagaaagagaagatgTAAACAATGTCCAGGTATAGGCTGAGGGTGGCAAAGATGTGTTCCTCAGGACTTATGGTGTATTGCTTTTTCCCCATCAGCATCTGTGTGTCAAACGCCAGGAACTACAAGACAAAAGAGAGATGGAAATGACAATAATTACCAACAAATACAAGGGACAATGTTGTGTAGGGGTCCTAAAAGCCTTATCGATAATGATATGCTGACTGTGCATTATCAACTTTTTATTGTTActcaaacaaagaaaataacgTGTGTATATTTAAACCCTGTGAAGCCTACTCTTATCATATTTGATATACAAAGGCCTCTAAATAAAAAACTTCTCTTAAAAAAACTGCTACATTACTTGTTTTacctgatttaaataaaatacctttcagtaaatatcttttttcttctgtgaaatttttacagatttttatgaatataagaatgacttttatattgttagtattattagtaatatgaaGACTTGCTGGACTGAAGCAACTTGTGTATGAGCTCCATATTCTCAACATATCATGccataacatttttgttcaagGATTGTCTATaggtttcaaaaaacatttttcaggtttcattaaaaaaactgaaacagatTCTGATTGTAC

Function

GO:

id name namespace
GO:0038023 signaling receptor activity molecular_function
GO:0060089 molecular transducer activity molecular_function
GO:0004888 transmembrane signaling receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233363 True 1717 lncRNA 0.34 1 14564340 14566056

Neighbor

gene id symbol gene type direction distance location
rbms2b rbms2b,LOC107673067,LOC107737513,LOC107668341,LOC107716168,LOC108425569 coding upstream 10210 14531453 ~ 14554130 (+)
LOC122328739 NA coding upstream 108797 14453706 ~ 14455543 (+)
fmnl3 fmnl3,LOC107673105,LOC107737516,LOC107716159 coding upstream 136157 14390815 ~ 14428183 (+)
esyt1a esyt1a,LOC107737514,LOC107673110,LOC107591117,LOC107716156,LOC107593905,LOC107668346 coding upstream 173831 14375593 ~ 14390509 (+)
pa2g4b pa2g4b,LOC107737517,LOC107593906,LOC107591063,LOC107668344,LOC107673109,LOC107716155 coding upstream 192447 14366558 ~ 14371893 (+)
r3hdml LOC107673068,LOC107737693,LOC107568404,LOC107716065 coding downstream 6191 14572247 ~ 14580946 (+)
hnf4a hnf4a,LOC107673078,LOC107737506,LOC107568408,LOC107564652 coding downstream 14976 14581032 ~ 14598335 (+)
ttpal ttpal,LOC107673079,LOC107568409,LOC107716173,LOC107695756,LOC107564663 coding downstream 34099 14600155 ~ 14603653 (+)
ccn5 wisp2,LOC107564647,LOC107716172,LOC107695740,LOC107574719,LOC107574685 coding downstream 76335 14642391 ~ 14646962 (+)
si:dkey-78k11.9 LOC107737691,LOC107564648,LOC107574687,LOC107695840,LOC107716176 coding downstream 81051 14647107 ~ 14649232 (+)
G157551 NA non-coding upstream 189290 14373577 ~ 14375050 (+)
LOC122328961 NA non-coding upstream 290605 14264664 ~ 14273735 (+)
G157531 NA non-coding upstream 367644 14196431 ~ 14196696 (+)
G157521 NA non-coding upstream 416724 14147410 ~ 14147616 (+)
G157494 NA non-coding upstream 475821 14087581 ~ 14088519 (+)
G157609 NA non-coding downstream 463 14566519 ~ 14566730 (+)
G157610 NA non-coding downstream 1145 14567201 ~ 14568506 (+)
G157611 NA non-coding downstream 3076 14569132 ~ 14569509 (+)
G157624 NA non-coding downstream 61534 14627590 ~ 14629198 (+)
G157626 NA non-coding downstream 65784 14631840 ~ 14636121 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other upstream 221066 14299701 ~ 14343274 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other upstream 438139 14094078 ~ 14126201 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 2312358 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 2817770 11697414 ~ 11746570 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 37737 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 43473 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 114804 14680860 ~ 14686618 (+)
LOC122328914 szrd1,LOC107673108,LOC107716129,LOC107737539,LOC107687433,LOC105899027 other downstream 146091 14712147 ~ 14714555 (+)
LOC122328907 mef2d,LOC107741762,LOC107549240,LOC107717782,LOC107597970,LOC107663114,LOC107689865 other downstream 159854 14725910 ~ 14758217 (+)

Expression


Co-expression Network