G157630


Basic Information

Item Value
gene id G157630
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14676736 ~ 15158751 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233425
AGTCGTGAGTTATAAAAACTAGCTGGACTTACTTGAAGCCAGTGCCTCTGTCTCAGTAGAGGGCACTTTGTAGATTTTTCCTCCTTTATACACAAAGCTTCCCTCGACCACTTTGAAGTCAAGATATCTGGTCACTTCAGTGTATAGAAGCATCTTAACTAACTGAccttaaggaaaaaaaacaatgacaaagcGTGGTGGCGCATTATTAttctgaatataataaaaaatggcaGCCTTGTATGAATTACTAatccaaaaacatgttttgaacAACATTATCACACCAACTATCATTTTACTTAGGTTTTTACCATTGGCCATTAAAAATTTAGGAATAAGATCCACATTCCAGTCTCTTCCCCGGCCCATTGACTCTGGGGGGCTGTCTGAAATCCCAAATCTCTTATAGAGCTGAGAGAAAAGCATGTAAAATGTGAGTGcatgtgtaaatgtttaataaaatgtattttgcaatttcataaacacttttttaaaaatacatggcTACAAATAGCAACATTTATTCTTGCAATTAGGCTACGCAGTTATAGTAAACATGCAATATCAAGCAGACATGAGATTGGAGTAGCGCCAGCGGTAAATGTGAAGCATCCTCACCTCCTCCAGGGGTGTGATGGAGGAACTTTCACCACCGTAGTATGGATTTCTGTCCATATGCAAAACTTTCTTTCCATTCACAGACATGATCCCAGAGAGAATACATTGTGAGCCCGGTGCCCAGTACGATAACATCATATTCCTCATCCATGTTGTATTACGGTGGATATCCCGTCTTTAGCCAAATTTccgctgcaaaaaaaaaaatatctgcaaaaCGGCCGTGGATGCAACGAAATATTTATGCGGAACCGGTCTGTTGTCCCGTTCGCGGCAGAAACGACCTCCCTGGAAAGAATTTATCGCTCAAATAATTCGATACGTATCACAATTGATCGCTGACTGTGGCGCGACCGGCGAGAACAACCAAAGATGGCCCTGACC
>TU233426
GAGGGTACAGGTATGGGCTCTTCCCGTAGCGTGCCAGAGACTCGCTGTAGAGCTTGATCCTATTGATGGTCTCCAGACACGGCTGTCCTGTAGAGCGCCAGGGCATGTCCCGTGAAGTCGATGACGTCCTGACCCAAGTCAAACTTCTTATACACGTCTCCCATTGTTGTGAGTTTGGGATCGACACCTTCCAAAGTCTTGGGGTCGTTCTCATCAAAGTTGGCCACAAAAACTAGGAACTTGCGGAAGCGTCTCTTCTCAAACATTCCCATTAGATCTGAGCAACACACGTCACGGGTCAACTACTTTTATCAAAAACAATCAGTCGTGAGTTATAAAAACTAGCTGGACTTACTTGAAGCCAGTGCCTCTGTCTCAGTAGAGGGCACTTTGTAGATTTTTCCTCCTTTATACACAAAGCTTCCCTCGACCACTTTGAAGTCAAGATATCTGGTCACTTCAGTGTATAGAAGCATCTTAACTAACTGACcttaaggaaaaaaacaatgacaaagcGTAGTGGCGCATTATTAttctgaatataataaaaaatggcaGCCTTGTATGAATTACTAatccaaaaacatgttttgaacAACATTATCACACCAACTATCATTTTACTTAGGTTTTTACCATTGGCCATTAAAAATTTAGGAATAAGATCCACATTCCAGTCTCTTCCCCGGCCCATTGACTCTGGGGGGCTGTCTGAAATCCCAAATCTCTTATAGAGCTGAGAGAAAAGCATGTAAAATGTGAGTGcatgtgtaaatgtttaataaaatgtattttgcaatttcataaacacttttttaaaaatacatggcTACAAATAGCAACATTTATTCTTGCAATTAGGCTACGCAGTTATAGTAAACATGCAATATCAAGCAGACATGAGATTGGAGTAGCGCCAGCGGTAAATGTGAAGCATCCTCACCTCCTCCAGGGGTGTGATGGAGGAACTTTCACCACCGTAGTATGGATTTCTGTCCATATGCAAAACTTTCTTTCCATTCACAGACATGATCCCAGAGAGAATACATTCCTACACAGATAAACACCATTATTGTAATCGGCCATGGAtatgaatttccatttttttttattcatgagtTGACATGGCAGCGTGCATCTATCCATTGCCTTGACTTCCGTGTTAAACACTGGGATGGATGCGAGTCACCCCACCCAACTAGTGATGCAAAGTCCGAATCATTTCCgcgaatcggttcttttgaGCAGTTAATGGAGCGCTTCGAAAACCAATTCTTCTGATTCGTCTACGTCACTCTGACAGCCCACCGAGGCctatcaaatgttttaaagctttattaaCAGCTGTGTTTATTGCAATTGTATGTGTTCAAATTAAGTTCGTTGCAGCcattacataaaacaataataatttacaacCTAAATAAAATTTACAGTTACATTAAACGATACTATAATCTTAGCTTCAGGTTTACATccaactgtttttgttttaacaatttCCACATAATTAAGTCGAAAATACATTTCCAGGAGGCATTTAAAAAACTTCTACCATTAAGTCAACGACAGACCCTCTCGTATCGATTCAATGAAAAGAACCGACTCACAAGAACAACTCGTTCGCGAATCGAACAACGCTACACCCAACCCACATTACGAGCCGCAGCCCATATCAGCCACTATCCTCCATGAAGATAAAGAACGCGtttgataaaaagaaaacactttattttacatctaatttattatttgcattaaccAATACTGTTTTCTGCACGCGAGCGACCAATGTCATTCGTAAAATCGGGCTCTTTAgattataacaataacaaaaaatgaatacagcCAATTGCAGGCAAACAGTAAACTAACATCACTTAAGTACGACACAGCTGTAACGCTGGCAAACGCAAAAGCCAAAATATGCgcagtaaatacataaatcccCCCTATTTCGACGCCCGAGCGAACGGGATACCTGATGCCACTCCTTAGAACCAGACACTGAGAGAGAAGAAtcattcattactttttaataaccGCGTTCATGTCAATACAACGACGCAGCCTCGACGGCTTTAACATTCGGGGGAAGGTGGATTTGGCGTGGATTGCGCTCGTATGCATGCAGAAATTGCGAGAAATGCTGGCTCACTACACAGACACAGTACAGTACTGGTCCAAAGGATGCGTCAGCAATAGGCCGTCGGGTTCAATCTAACGCTAAGCATCTATTCGTTCAGCCACATCTACGAGCATCCGAGCACGGGGGAAGGTGGATTTGGCGTGGATTGCGCTCGTATGCATGCAGAAATTGCGAGAAATGCTGGCTCACTACACAGACACAGTACAGTACTGGTCCAAAGGATGCGTCAGCAATAGGCCGTCGGGTTCAATCTAACGCTAAGCATCTATTCGTTCAGCCACATCTACGAGCATCCGAGCATCCGTCGGCGATATCTTAATCCGTTCCCGAAGCCAGCGAGTCGTCGGTGACCCCAACGCGTTACTCACTGTGAGCCCGGTGCCCAGTACGATAACATCATATTCCTCATCCATGTTGTATTACGGTGGATATCCCGTCTTTAGCCAAATTTccgctgcaaaaaaaaaaatatctgcaaaaCGGCCGTGGATGCAACGAAATATTTATGCGGAACCGGTCTGTTGTCCCGTTCGCGGCAGAAACGACCTCCCTGGAAAGAATTTATCGCTCAAATAATTCGATACGTATCACAATTGATCGCTGACTGTGGCGCGACCGGCGAGAACAACCAAAGATGGCCCTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233425 False 1005 lncRNA 0.40 2 15156461 15158751
TU233426 True 2795 lncRNA 0.43 3 14676736 15158751

Neighbor

gene id symbol gene type direction distance location
pfkfb1 pfkfb1,LOC107673088,LOC107737504,LOC107716165,LOC107574688,LOC107564646,LOC107695839 coding upstream 16804 14649780 ~ 14659932 (+)
si:dkey-78k11.9 LOC107737691,LOC107564648,LOC107574687,LOC107695840,LOC107716176 coding upstream 27504 14647107 ~ 14649232 (+)
ccn5 wisp2,LOC107564647,LOC107716172,LOC107695740,LOC107574719,LOC107574685 coding upstream 29774 14642391 ~ 14646962 (+)
ttpal ttpal,LOC107673079,LOC107568409,LOC107716173,LOC107695756,LOC107564663 coding upstream 73083 14600155 ~ 14603653 (+)
hnf4a hnf4a,LOC107673078,LOC107737506,LOC107568408,LOC107564652 coding upstream 78401 14581032 ~ 14598335 (+)
LOC122328905 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686 coding downstream 999 15159750 ~ 15165538 (+)
ptpn22 LOC107737496,LOC107668554,LOC107570169,LOC107716160,LOC107695833,LOC107564640 coding downstream 165593 15324344 ~ 15338267 (+)
si:ch73-206d17.1 LOC107726152,LOC107571682,LOC107695830,LOC107568454 coding downstream 316972 15475723 ~ 15478611 (+)
zgc:158263 zgc:158263,LOC107716164,LOC107695826,LOC107568456,LOC107668552 coding downstream 441901 15600652 ~ 15608453 (+)
cacnb3b cacnb3b,LOC107695823,LOC107570227,LOC107668566,LOC104967530 coding downstream 514301 15673052 ~ 15685048 (+)
G157626 NA non-coding upstream 40615 14631840 ~ 14636121 (+)
G157624 NA non-coding upstream 47538 14627590 ~ 14629198 (+)
G157611 NA non-coding upstream 107227 14569132 ~ 14569509 (+)
G157610 NA non-coding upstream 108230 14567201 ~ 14568506 (+)
G157609 NA non-coding upstream 110006 14566519 ~ 14566730 (+)
G157673 NA non-coding downstream 23384 15182135 ~ 15311694 (+)
G157676 LOC107668555,LOC107737499,LOC107570136,LOC107716162,LOC107695834,LOC107564641 non-coding downstream 54576 15213327 ~ 15341005 (+)
G157704 LOC107570193,LOC107668567,LOC107695831,LOC107568457 non-coding downstream 320292 15479043 ~ 15482462 (+)
G157705 NA non-coding downstream 323921 15482672 ~ 15486980 (+)
G157728 LOC107745451,LOC107716070 non-coding downstream 382042 15540793 ~ 15543928 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other upstream 39919 14603793 ~ 14636817 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other upstream 333462 14299701 ~ 14343274 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other upstream 550535 14094078 ~ 14126201 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 2424754 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 2930166 11697414 ~ 11746570 (+)
G157620 NA other downstream 141953 15300704 ~ 15304550 (+)
G158152 rps26,RPS26,rps26l,LOC107563646 other downstream 824919 15983670 ~ 16083529 (+)
G158162 dnajc22,LOC107708801,LOC107716089,LOC107563648,LOC107571715,LOC107695753 other downstream 863448 16022199 ~ 16023394 (+)
LOC122328571 kmt2d,LOC107681934,LOC107716211,LOC107695802,LOC107563643 other downstream 1423219 16581970 ~ 16607408 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other downstream 1462447 16621198 ~ 16664314 (+)

Expression


Co-expression Network