G157875 (LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444)


Basic Information

Item Value
gene id G157875
gene name LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14143662 ~ 14143930 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233789
ACTCTtccttcttcctctctctgacaACCACGTCCTGTTCCACCATTTTGTCTGCTGTTTTCACACAAGGCTTAGGGGGATTTTTGGTTTCAATGTAGTCCATCTCACGCTCCACCCGGTCTACCCTTGCTCCCGCACCCTCCATGTCTGAACGTAGTTTGGTGTGCTCCTTACTCAACTTCTCCAACAGGTCTGCGGCCTGCTGCCTGAATTCCTTCAGGTCGGAGTTGTAGCGGTTGTTCTGTTCATGCCACAAGGCAATGCGTTCC

Function

NR:

description
PREDICTED: olfactomedin-like protein 3B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233789 True 269 lncRNA 0.52 1 14143662 14143930

Neighbor

gene id symbol gene type direction distance location
sdf4 sdf4,LOC107591077,LOC107673072,LOC107716138,LOC107687443,LOC107593920 coding downstream 39436 14100397 ~ 14104226 (-)
ctdsp2 ctdsp2,LOC107593922,LOC107716136,LOC107673073,LOC107687442 coding downstream 49226 14085586 ~ 14094436 (-)
tmem240a tmem240a,tmem240,LOC108275582,LOC107593924,LOC107687438,LOC107673083,LOC105898995 coding downstream 103584 14031726 ~ 14040078 (-)
LOC122328469 sdhb,LOC107673094,LOC107593926,LOC107591143,LOC103467007 coding downstream 114494 14025634 ~ 14029168 (-)
atp13a2 LOC107737536,LOC107673093,LOC107716130,LOC107687434 coding downstream 118136 14013247 ~ 14025526 (-)
syt6a syt6a,syt6,LOC107673111,LOC107591076,LOC107593918,LOC108433426,LOC107737664 coding upstream 6593 14150523 ~ 14196687 (-)
avpr2aa avpr2aa,LOC107591070,LOC107737524,LOC107687451,LOC107716149,LOC107673055,LOC108436342 coding upstream 113920 14257850 ~ 14272460 (-)
idh3g idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561 coding upstream 143031 14286961 ~ 14293566 (-)
lrp1ab lrp1,lrp1ab,LOC107673053,LOC107593902,LOC108425568 coding upstream 285042 14428972 ~ 14524636 (-)
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding upstream 410884 14554814 ~ 14563800 (-)
G157874 NA non-coding downstream 1494 14141939 ~ 14142168 (-)
G157863 NA non-coding downstream 67725 14057837 ~ 14075937 (-)
G157826 NA non-coding downstream 318073 13823993 ~ 13825589 (-)
G157813 NA non-coding downstream 370354 13772775 ~ 13773308 (-)
G157799 NA non-coding downstream 396491 13742257 ~ 13747171 (-)
G157880 NA non-coding upstream 92422 14236352 ~ 14237014 (-)
G157885 NA non-coding upstream 98651 14242581 ~ 14243955 (-)
G157901 NA non-coding upstream 158942 14302872 ~ 14343270 (-)
G157905 LOC107668334,LOC107716153,LOC107737519 non-coding upstream 180786 14324716 ~ 14325647 (-)
G157906 NA non-coding upstream 182454 14326384 ~ 14461017 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 861335 13280256 ~ 13282327 (-)
G157367 NA other downstream 926254 13141078 ~ 13217408 (-)
G156985 NA other downstream 2219012 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 2285694 11763709 ~ 11857968 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 78879 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 183036 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 426417 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 540960 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 903222 15047152 ~ 15048344 (-)

Expression


Co-expression Network