G157885


Basic Information

Item Value
gene id G157885
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14242581 ~ 14243955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233804
TGGAAAGGTTGAGTAGGACACCAGGATGTCGCTGGGCGTGGGCAAGGTGGCCCGAGCATCAAGTTCATCAGATGTGCTGAGAGAGTCACTGCTGGAGGATATAGGAATAGCATCCATCTGGTCATCTATCCCACCCAAAGAAGGCTCCACCTCATCTGGAGAAACCTCAAAACCTGTGTCCTTCTCACCTATAGGTATTTCGCAGAACCACAGTAAATGTGTCTGGACCTCTCGGCTACAAGACTTGTGAAAGATTTGTGAGATGCCCACCTCCTCCACAGGCCTGGATGAAGAACAGTTTAGGCTTGCCCTGCAGAGAAGGACAGCACTGGCCGTTGAGGTAGTTTGTGATTATCTGAACCGGGACAGCTGGTCCGTCAACTCCATGAACCGCTCCGGGAAAACGATTGTGGTTAGCCTAAGCATTAGAGAAATGTCGAACACCAAAGCAGAATTAGAAAATTGCACTAATGTTTTTGTAACTGGATCGCTTGATGGTGTTCTACAAAAAAGGAGGAAGCAAACAAAATGTCTTTGCAGGTTGTGCTTCTTTGTTGAAAACTAACGGTcttattaaatgtgaaaacaaatatataacgTATCCTCTTTTTtcgaagaaaaatatttttcacctCAGTGCCGTGCGAAAGGATGATGACCACACAGCAGTCAAACGCAGAATGATCCCTCTTTGCTAAAGATGCCATCTCGTGTCTAATGCGCTACAGatatgaaaaaaactgtttttttaaagacttatCTTACTGCTTTGTTTAATGTGAGAAGAAGAGGAAGCATCGTGCTTACTTTGTACTTCAAGTTCCTTTTTGAAATAACCTCAAAGTTGAGAGCTTTAAATcttttctccatctttctgcAATCAATGTCGGAACCCTTACGATCATTTAGATCCGAATCTGGGTCGAAATATACATTGTTTATAATCAGGCAGATCCCACACGGACTGGCATCCATTT

Function

GO:

id name namespace
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport biological_process
GO:0048193 Golgi vesicle transport biological_process
GO:0046907 intracellular transport biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0051641 cellular localization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233804 True 977 lncRNA 0.43 2 14242581 14243955

Neighbor

gene id symbol gene type direction distance location
syt6a syt6a,syt6,LOC107673111,LOC107591076,LOC107593918,LOC108433426,LOC107737664 coding downstream 45894 14150523 ~ 14196687 (-)
sdf4 sdf4,LOC107591077,LOC107673072,LOC107716138,LOC107687443,LOC107593920 coding downstream 138355 14100397 ~ 14104226 (-)
ctdsp2 ctdsp2,LOC107593922,LOC107716136,LOC107673073,LOC107687442 coding downstream 148145 14085586 ~ 14094436 (-)
tmem240a tmem240a,tmem240,LOC108275582,LOC107593924,LOC107687438,LOC107673083,LOC105898995 coding downstream 202503 14031726 ~ 14040078 (-)
LOC122328469 sdhb,LOC107673094,LOC107593926,LOC107591143,LOC103467007 coding downstream 213413 14025634 ~ 14029168 (-)
avpr2aa avpr2aa,LOC107591070,LOC107737524,LOC107687451,LOC107716149,LOC107673055,LOC108436342 coding upstream 13895 14257850 ~ 14272460 (-)
idh3g idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561 coding upstream 43006 14286961 ~ 14293566 (-)
lrp1ab lrp1,lrp1ab,LOC107673053,LOC107593902,LOC108425568 coding upstream 185017 14428972 ~ 14524636 (-)
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding upstream 310859 14554814 ~ 14563800 (-)
LOC122328465 LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177 coding upstream 320509 14564464 ~ 14569658 (-)
G157880 NA non-coding downstream 5567 14236352 ~ 14237014 (-)
G157875 LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444 non-coding downstream 98651 14143662 ~ 14143930 (-)
G157874 NA non-coding downstream 100413 14141939 ~ 14142168 (-)
G157863 NA non-coding downstream 166644 14057837 ~ 14075937 (-)
G157826 NA non-coding downstream 416992 13823993 ~ 13825589 (-)
G157901 NA non-coding upstream 58917 14302872 ~ 14343270 (-)
G157905 LOC107668334,LOC107716153,LOC107737519 non-coding upstream 80761 14324716 ~ 14325647 (-)
G157906 NA non-coding upstream 82429 14326384 ~ 14461017 (-)
G157915 LOC107673099,LOC107737518 non-coding upstream 113085 14357040 ~ 14359030 (-)
G157920 NA non-coding upstream 122604 14366559 ~ 14367629 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 9530 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 960254 13280256 ~ 13282327 (-)
G157367 NA other downstream 1025173 13141078 ~ 13217408 (-)
G156985 NA other downstream 2317931 11922844 ~ 11924650 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 2440949 11799922 ~ 11801632 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 83011 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 326392 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 440935 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 803197 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 1103462 15347417 ~ 15474390 (-)

Expression


Co-expression Network