G157905 (LOC107668334,LOC107716153,LOC107737519)


Basic Information

Item Value
gene id G157905
gene name LOC107668334,LOC107716153,LOC107737519
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14324716 ~ 14325647 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233833
TGCGAATATTGTTGAGGCACACTTAATGGGACCTGTGATGCCATAGTAACTGGTTGAATGAAAGTCTGTGCCACAGGAATGTTAGGAGCCCCACCACCACTTTGGCCAATGGAAATGCCAGATATCCCACCATTCTGGCCAACAGGCACATTTGGAACCCCTCCGCTCTGACCAATAGGGAGCAGCTGGGGATGAGACACAACCCCTGCTCCTTTCACTCCCTAAATAAAGGAAACAATTCTTATCTGACCAAAGCGTACATTCAAACAACAATTACTTTTCTTTCTGAACATCAAAGGTTTCAAATGAGCAAGAATGGTGGTATCTTAGCAGCTGAGGATGTATGGCACAAGATATGTTTGTGAACATGCAAAGTAAGAAAGTGAAGTAGCAGCACTTACAGATGCGGCAGTGGGGTAGCTGGTTTGAGCATGAGCACATTGGTTCGCTGTCTCAGGTACAGAAAAAGCTTGGCTTTGTCCACTGACAGCAGGAAGACTCTCCCCCTCTGAATATGAAGAGTGGACCTGTGAGGCCCAAAGCAGTGCCTTGCTGTTGGACATGTTGGTCCACTTCCGGCAGCTCCTCTGCCTCTCCTTGAGCCCCAGTAGCTACAGCAGCTCCTGTACCCTGTGAGGAGGTGGTGCCTGAAGGCTGGACATAAGTAAAGGAGGAGGTTAGGACTGAGGAGTCACGGCGTTCATCCagactttgttgttgttgctgttgctgctgctgttggagGAGCTGCTGTTGCCGTCTTTCACGGGACTTCTTAATCAGAGTCACCCTGTCTCTGATTGACTTCCCCACCACCTTAGCATCACTTTCATGGAAAAATCC

Function

NR:

description
PREDICTED: serine/threonine-protein kinase WNK1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233833 True 843 lncRNA 0.49 2 14324716 14325647

Neighbor

gene id symbol gene type direction distance location
idh3g idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561 coding downstream 31150 14286961 ~ 14293566 (-)
avpr2aa avpr2aa,LOC107591070,LOC107737524,LOC107687451,LOC107716149,LOC107673055,LOC108436342 coding downstream 52256 14257850 ~ 14272460 (-)
syt6a syt6a,syt6,LOC107673111,LOC107591076,LOC107593918,LOC108433426,LOC107737664 coding downstream 128029 14150523 ~ 14196687 (-)
sdf4 sdf4,LOC107591077,LOC107673072,LOC107716138,LOC107687443,LOC107593920 coding downstream 220490 14100397 ~ 14104226 (-)
ctdsp2 ctdsp2,LOC107593922,LOC107716136,LOC107673073,LOC107687442 coding downstream 230280 14085586 ~ 14094436 (-)
lrp1ab lrp1,lrp1ab,LOC107673053,LOC107593902,LOC108425568 coding upstream 103325 14428972 ~ 14524636 (-)
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding upstream 229167 14554814 ~ 14563800 (-)
LOC122328465 LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177 coding upstream 238817 14564464 ~ 14569658 (-)
ada ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842 coding upstream 298606 14624253 ~ 14636325 (-)
gdi1 gdi1,LOC107564645,LOC107737502,LOC107673075,LOC107716167,LOC107574690 coding upstream 346630 14672277 ~ 14679231 (-)
G157885 NA non-coding downstream 80761 14242581 ~ 14243955 (-)
G157880 NA non-coding downstream 87702 14236352 ~ 14237014 (-)
G157875 LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444 non-coding downstream 180786 14143662 ~ 14143930 (-)
G157874 NA non-coding downstream 182548 14141939 ~ 14142168 (-)
G157863 NA non-coding downstream 248779 14057837 ~ 14075937 (-)
G157906 NA non-coding upstream 737 14326384 ~ 14461017 (-)
G157915 LOC107673099,LOC107737518 non-coding upstream 31393 14357040 ~ 14359030 (-)
G157920 NA non-coding upstream 40912 14366559 ~ 14367629 (-)
G157928 NA non-coding upstream 58091 14383738 ~ 14443451 (-)
G157966 mef2d non-coding upstream 325777 14651424 ~ 14729662 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 91665 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1042389 13280256 ~ 13282327 (-)
G157367 NA other downstream 1107308 13141078 ~ 13217408 (-)
G156985 NA other downstream 2400066 11922844 ~ 11924650 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 2523084 11799922 ~ 11801632 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 1319 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 244700 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 359243 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 721505 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 1021770 15347417 ~ 15474390 (-)

Expression


Co-expression Network