G157920


Basic Information

Item Value
gene id G157920
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14366559 ~ 14367629 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU233861
TTCTTtatctctttctccttcttgaAGACCTTGCCTGTTTCAGCAGTGATGAAAGCGTCTCCTTTCTCGCACAGGCTGAGGACAGACACGCCAGGTTTGGCCGCTTCGATGAGCACCTTCAAAGCctGTTTGCTATGTCGGCCCCCATCTTGTACTTGGTAACTACCAAGTCATCAGCGATGGTGTGCTCTTGCTGGTCGTCGTCTCCTGACATGCTTGTCAGTGGTGGGATTCAAGAGGAGCTCGTAACTTTTTCCCTCGCTTCGCTTGTGGGATGATGGAGCGCAGCACGCTTCAGATCTCACAGCCTGCGCCAGCAGCAGCCGTGGAAACGCGC

Function

NR:

description
DNA topoisomerase I, mitochondrial isoform X1

GO:

id name namespace
GO:0005523 tropomyosin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233861 True 337 lncRNA 0.54 2 14366559 14367629

Neighbor

gene id symbol gene type direction distance location
idh3g idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561 coding downstream 72993 14286961 ~ 14293566 (-)
avpr2aa avpr2aa,LOC107591070,LOC107737524,LOC107687451,LOC107716149,LOC107673055,LOC108436342 coding downstream 94099 14257850 ~ 14272460 (-)
syt6a syt6a,syt6,LOC107673111,LOC107591076,LOC107593918,LOC108433426,LOC107737664 coding downstream 169872 14150523 ~ 14196687 (-)
sdf4 sdf4,LOC107591077,LOC107673072,LOC107716138,LOC107687443,LOC107593920 coding downstream 262333 14100397 ~ 14104226 (-)
ctdsp2 ctdsp2,LOC107593922,LOC107716136,LOC107673073,LOC107687442 coding downstream 272123 14085586 ~ 14094436 (-)
lrp1ab lrp1,lrp1ab,LOC107673053,LOC107593902,LOC108425568 coding upstream 61343 14428972 ~ 14524636 (-)
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding upstream 187185 14554814 ~ 14563800 (-)
LOC122328465 LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177 coding upstream 196835 14564464 ~ 14569658 (-)
ada ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842 coding upstream 256624 14624253 ~ 14636325 (-)
gdi1 gdi1,LOC107564645,LOC107737502,LOC107673075,LOC107716167,LOC107574690 coding upstream 304648 14672277 ~ 14679231 (-)
G157915 LOC107673099,LOC107737518 non-coding downstream 7529 14357040 ~ 14359030 (-)
G157901 NA non-coding downstream 23289 14302872 ~ 14343270 (-)
G157905 LOC107668334,LOC107716153,LOC107737519 non-coding downstream 40912 14324716 ~ 14325647 (-)
G157885 NA non-coding downstream 122604 14242581 ~ 14243955 (-)
G157880 NA non-coding downstream 129545 14236352 ~ 14237014 (-)
G157928 NA non-coding upstream 16109 14383738 ~ 14443451 (-)
G157966 mef2d non-coding upstream 283795 14651424 ~ 14729662 (-)
LOC122328920 NA non-coding upstream 462635 14830264 ~ 14830849 (-)
G157999 itga8,LOC107689880,LOC107717802,LOC107681583 non-coding upstream 468732 14836361 ~ 14845678 (-)
LOC122328921 NA non-coding upstream 820519 15188148 ~ 15189638 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other downstream 35775 14326966 ~ 14330784 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 133508 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1084232 13280256 ~ 13282327 (-)
G157367 NA other downstream 1149151 13141078 ~ 13217408 (-)
G156985 NA other downstream 2441909 11922844 ~ 11924650 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 202718 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 317261 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 679523 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 979788 15347417 ~ 15474390 (-)
LOC122329227 NA other upstream 1254313 15621942 ~ 15717250 (-)

Expression


Co-expression Network