G158014


Basic Information

Item Value
gene id G158014
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15202366 ~ 15203950 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234028
CTGCAGTGAATACAGATGGGAATCTCGTCGTGATCCTGGTAGATCCTCATGTCCTGCAGCAGCTCCAGGATGGCAGGAATGGAGTCGGGTACTCCGTGATCCGGCCAGTTCACATAGTGCAGCTGCTTCAGTGTCCGAGACACCTGGAAACAACCGGTGCCATATAGACAGGTTTTCTGGTAACCACGGTTTACACATTTTGGGGGTTTTCTTTCGTCACTACAAAACACCTCCAGAAATGTCAGCACCAGTCTGTCTTTATGCAATGTCTGCACCGTCTCTGAACTTTTGACTATTAAGGCTGAATGTTGTATACTCTCACGCAATGGCATTTTCAAGAAGGAGAAAGCATGTATGGGCAATTTGAAGGTCCCCACAACCTAAAGCAGTATTCGTAAAGCTCATTGAACTTGACTGAAGTGTGAACACATCTAGTTCATAAAGCAGCTGTTTAATGGCAAATCAAGACATCAGgagaaaaaagatattttaaaattattcctAAAAGCAAAGGGGGgaagcaataaaaacattttaaagaaatgtacaatCTTTTTGTATAAACTATAAAGACGGTAAAGAATGTTATTCATAGCTGTGCAGTTAAGATCAAAGACATGTTACTTACTTGTTTAAATTTCACCTTCAGCGTCCGTGTTAAATATTCTCCCTTATTCTCATCAGACTCATAGTGAATGGTAAAGGGCTCACACACGAACACATCGTCCTTTGACTCCGGCCAGTAACGCTcacattttt

Function

GO:

id name namespace
GO:0009615 response to virus biological_process
GO:0051090 regulation of DNA-binding transcription factor activity biological_process

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04668 TNF signaling pathway
ko04657 IL-17 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU234028 True 759 lncRNA 0.41 2 15202366 15203950

Neighbor

gene id symbol gene type direction distance location
LOC122328567 LOC107668556,LOC107570149 coding downstream 4905 15195117 ~ 15197461 (-)
LOC122328908 smad3b,LOC107686302,LOC107738715,LOC107583760,LOC107672260 coding downstream 110119 15078586 ~ 15092247 (-)
LOC122328916 iqch coding downstream 128484 15049366 ~ 15073882 (-)
LOC122328901 LOC107549209,LOC107689901,LOC107738870,LOC107681562 coding downstream 269360 14905836 ~ 14933006 (-)
LOC122328919 kcnn3,LOC107723559,LOC107657645,LOC107699550,LOC107714686,LOC107595057,LOC108280396 coding downstream 393589 14772091 ~ 14808777 (-)
LOC122328911 LOC107570149,LOC107668556 coding upstream 112777 15316727 ~ 15324022 (-)
LOC122328900 rsbn1,LOC107668555,LOC107570136,LOC107737499,LOC107716162,LOC107564641,LOC107695834,LOC100330644 coding upstream 135109 15339059 ~ 15347198 (-)
tmem269 LOC107570193,LOC107726151,LOC107695831,LOC107668567,LOC107568457 coding upstream 275090 15479040 ~ 15490268 (-)
si:dkey-205h13.2 LOC107716170 coding upstream 298478 15502428 ~ 15506646 (-)
hspg2 hspg2,LOC107745451,LOC107695829 coding upstream 307005 15510955 ~ 15598026 (-)
LOC122328921 NA non-coding downstream 12728 15188148 ~ 15189638 (-)
G157999 itga8,LOC107689880,LOC107717802,LOC107681583 non-coding downstream 356688 14836361 ~ 14845678 (-)
LOC122328920 NA non-coding downstream 371517 14830264 ~ 14830849 (-)
G157966 mef2d non-coding downstream 472704 14651424 ~ 14729662 (-)
G157928 NA non-coding downstream 758915 14383738 ~ 14443451 (-)
G157984 NA non-coding upstream 6278 15210228 ~ 15338843 (-)
G158019 NA non-coding upstream 91938 15295888 ~ 15296636 (-)
G158024 si:ch73-206d17.1,LOC107571682,LOC107726152,LOC107695830 non-coding upstream 272537 15476487 ~ 15477769 (-)
G158174 LOC107571455 non-coding upstream 399898 15603848 ~ 15607080 (-)
G158188 NA non-coding upstream 476936 15680886 ~ 15681872 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other downstream 154022 15047152 ~ 15048344 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other downstream 612744 14570347 ~ 14589622 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other downstream 871582 14326966 ~ 14330784 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 969315 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1920039 13280256 ~ 13282327 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 143467 15347417 ~ 15474390 (-)
LOC122329227 NA other upstream 417992 15621942 ~ 15717250 (-)
G158231 NA other upstream 804156 16008106 ~ 16008915 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other upstream 939883 16143833 ~ 16169834 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other upstream 1036860 16240810 ~ 16243395 (-)

Expression


Co-expression Network