G158024 (si:ch73-206d17.1,LOC107571682,LOC107726152,LOC107695830)


Basic Information

Item Value
gene id G158024
gene name si:ch73-206d17.1,LOC107571682,LOC107726152,LOC107695830
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15476487 ~ 15477769 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234059
CATCACTTCTGTCTGTTAGGGGAAGCCTCATCATCCGTTCAGGTGCCTTCCATTTCACCGGCACATTGGCTTCTTGTTCTTTGTTGACTGTTCTCGACTGACGGCTCTTGAAAGCCCAATCCAATCCAGAGACTTTCACAGAGAGCTCTGAACCAATCAACATGTTCCGGGCTGCGACATCCCCATGAATAATTCTGTGGTAGGAGTGTAAATAGtcctaaaacaaaaatcattaataaatcgTTTAAAGACTGTTTACATGTCTTATGGTTTGAGTACACAGTGGGTAAACAACTCACCAGTCCTGCTGCGACCTGTTTAGCTACAAGATAAACGGAGCTTTCTGAAAAGGTCTGGACGTTACCACTTGAGTCACATCTGTTCTGTTCAGCAAGAGTTACATTCAGTAACATTGTCATGAAAGACATTGTCTGtttcagtggttcaactgtaatgtgATGACGAGGGTGGAAAACGCTCTTTAAAGGTTATACTATAACTACAAAAGCTTATTTCTAACATgggataaaaagtaaaaagctaattttacaattaaatttttatcaCCGTAAATGTGAGAATTGTAACATATAAACGTGtatttctgataaaaaaaaaaaagttcaaaattaGTAGAAATCAGAAACGATAAACTTGAGAGTGAAAGAACGAAAGTtattgaattataattttttttaaagtataaaagtatttatctcacatttctgacttttttctctgAACTGAATACAAACTAGTACCTTTTGAAAGGATAACAGCCCAGTATCGGGTTTGTACCTCTATGAGTATACTGTAGGTGTTTTTACCTCTCGAAGACTCCAGAGAAAATGCAGGAGGTTCCCTGGAACACTTGCCTCCAAAACCAGGTACATGGGCATCCGGCGTGTCTGGCAGTATAACATCTTGACTATATTCTCATGTTTGCTCACTGCTGCATTGAAAAGGACAAAATCCAAAAATTCAGTAGCCTCCGCTCGATTTGACCCATCTGAAACGAGAACATTTATCCAACATTTATAGACTTGTTGTAAGCACCTTCTAATGAGGGATTTGTGTTCTGTACCTTTAAGAGTTTTAGCTGTCCCGTGCAGATTGGTCCATAGCGTCCCTTCTGAAGCGGCTCCACCCCCTCCAGAGTGCACTGAGCAGGTATCTCCCATGGATCCAGAGCATCCTGTGCAGGCCGCATGCTCCCAAAGCCTGTGTCCAAAGGTACAGGCTCCCTTTC

Function

symbol description
si:ch73-206d17.1 Predicted to enable non-membrane spanning protein tyrosine kinase activity and signaling receptor binding activity. Predicted to be involved in cell differentiation; innate immune response; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be extrinsic component of cytoplasmic side of plasma membrane.

NR:

description
PREDICTED: tyrosine-protein kinase STYK1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234059 True 1249 lncRNA 0.40 2 15476487 15477769

Neighbor

gene id symbol gene type direction distance location
LOC122328900 rsbn1,LOC107668555,LOC107570136,LOC107737499,LOC107716162,LOC107564641,LOC107695834,LOC100330644 coding downstream 129289 15339059 ~ 15347198 (-)
LOC122328911 LOC107570149,LOC107668556 coding downstream 152465 15316727 ~ 15324022 (-)
LOC122328567 LOC107668556,LOC107570149 coding downstream 279026 15195117 ~ 15197461 (-)
LOC122328908 smad3b,LOC107686302,LOC107738715,LOC107583760,LOC107672260 coding downstream 384240 15078586 ~ 15092247 (-)
LOC122328916 iqch coding downstream 402605 15049366 ~ 15073882 (-)
tmem269 LOC107570193,LOC107726151,LOC107695831,LOC107668567,LOC107568457 coding upstream 1271 15479040 ~ 15490268 (-)
si:dkey-205h13.2 LOC107716170 coding upstream 24659 15502428 ~ 15506646 (-)
hspg2 hspg2,LOC107745451,LOC107695829 coding upstream 33186 15510955 ~ 15598026 (-)
galnt6 galnt6,LOC107695825,LOC107570209,LOC107668563,LOC107568460 coding upstream 133846 15611615 ~ 15620804 (-)
adcy6b adcy6b,adcy6,LOC107695824,LOC107716189,LOC107745452,LOC107668560,LOC108433131 coding upstream 144712 15622481 ~ 15659407 (-)
G157984 NA non-coding downstream 137644 15210228 ~ 15338843 (-)
G158019 NA non-coding downstream 179851 15295888 ~ 15296636 (-)
G158014 NA non-coding downstream 272537 15202366 ~ 15203950 (-)
LOC122328921 NA non-coding downstream 286849 15188148 ~ 15189638 (-)
G157999 itga8,LOC107689880,LOC107717802,LOC107681583 non-coding downstream 630809 14836361 ~ 14845678 (-)
G158174 LOC107571455 non-coding upstream 126079 15603848 ~ 15607080 (-)
G158188 NA non-coding upstream 203117 15680886 ~ 15681872 (-)
G158198 NA non-coding upstream 250385 15728154 ~ 15789331 (-)
G158208 NA non-coding upstream 334512 15812281 ~ 15812927 (-)
G158227 NA non-coding upstream 486984 15964753 ~ 15965763 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other downstream 2097 15347417 ~ 15474390 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other downstream 174805 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other downstream 428143 15047152 ~ 15048344 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other downstream 886865 14570347 ~ 14589622 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other downstream 1145703 14326966 ~ 14330784 (-)
LOC122329227 NA other upstream 144173 15621942 ~ 15717250 (-)
G158231 NA other upstream 530337 16008106 ~ 16008915 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other upstream 666064 16143833 ~ 16169834 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other upstream 763041 16240810 ~ 16243395 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other upstream 877600 16355369 ~ 16358705 (-)

Expression


Co-expression Network