G158115


Basic Information

Item Value
gene id G158115
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15896647 ~ 15949421 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234180
ttttttttttttttttttttttttttttATTTATTAgtaagattattttaatttgcctgTTGCAACAGCTTTACAATAAATACGATAGATACAaacaagatgaaagaaaaagacacaggcagatgaataaataatttaaataaagaattcAGTCATTTCATATTGTATCTGTCTGTCCTCAATTTTTCTCATGATTATTTATTGAGCGACATATGCACTGGAGGCTTCTTGCTGATGACATGCTCCATAAGAGCGTGTTCAGAGGTATCTAGACTAATCTTGTACTTTGCCAAAATCTTCATAATAGGCCTCAGCTTCAACCACCACTGGTTCTTCGGAATACGGTGTCTGAGGGAAGGGATAAGCGAG

Function

GO:

id name namespace
GO:0046031 ADP metabolic process biological_process
GO:0006090 pyruvate metabolic process biological_process
GO:0006096 glycolytic process biological_process
GO:1901292 nucleoside phosphate catabolic process biological_process
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0046939 nucleotide phosphorylation biological_process
GO:0019359 nicotinamide nucleotide biosynthetic process biological_process
GO:0019363 pyridine nucleotide biosynthetic process biological_process
GO:0009132 nucleoside diphosphate metabolic process biological_process
GO:0009135 purine nucleoside diphosphate metabolic process biological_process
GO:0006754 ATP biosynthetic process biological_process
GO:0006757 ATP generation from ADP biological_process
GO:0009145 purine nucleoside triphosphate biosynthetic process biological_process
GO:0042866 pyruvate biosynthetic process biological_process
GO:0072525 pyridine-containing compound biosynthetic process biological_process
GO:0009166 nucleotide catabolic process biological_process
GO:0046434 organophosphate catabolic process biological_process
GO:0009179 purine ribonucleoside diphosphate metabolic process biological_process
GO:0009185 ribonucleoside diphosphate metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0009206 purine ribonucleoside triphosphate biosynthetic process biological_process
GO:0016052 carbohydrate catabolic process biological_process

KEGG:

id description
ko00010 Glycolysis / Gluconeogenesis
ko00030 Pentose phosphate pathway
ko00680 Methane metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU234180 True 369 lncRNA 0.33 2 15896647 15949421

Neighbor

gene id symbol gene type direction distance location
LOC122328928 LOC107716074,LOC107563642,LOC107695755,LOC107571700,LOC107687557,LOC107745480 coding upstream 28546 15862039 ~ 15868101 (+)
mipa mipa,LOC107745456,LOC107570312,LOC107668565,LOC107695819,LOC107716194,LOC107571785 coding upstream 160427 15733686 ~ 15736220 (+)
ptges3a ptges3a,ptges3,LOC107745455,LOC107570321,LOC107716195,LOC107695820,LOC107571786 coding upstream 167441 15724783 ~ 15729206 (+)
rnd1b rnd1b,rnd1,LOC107745453,LOC107716191,LOC107668562,LOC103037018,LOC108275505,LOC103358261 coding upstream 194404 15691510 ~ 15702243 (+)
cacnb3b cacnb3b,LOC107695823,LOC107570227,LOC107668566,LOC104967530 coding upstream 211599 15673052 ~ 15685048 (+)
wnt1 wnt1,LOC107563635,LOC107716204,LOC107695811,LOC107681946,LOC107745472,LOC107570486 coding downstream 45315 15994736 ~ 16000771 (+)
rps26 rps26,RPS26,rps26l,LOC107563646 coding downstream 58195 16007616 ~ 16008734 (+)
lmbr1l lmbr1l,LOC107708860,LOC107681941,LOC107716206,LOC107695807 coding downstream 74802 16024223 ~ 16038514 (+)
dhh dhh,LOC107708800,LOC107571723,LOC107716210,LOC107681955,LOC107563640,LOC107695806 coding downstream 93839 16043260 ~ 16048908 (+)
kmt2d kmt2d,LOC107681934,LOC107695802,LOC107716211 coding downstream 101144 16050565 ~ 16083002 (+)
G158110 NA non-coding upstream 14755 15880663 ~ 15881892 (+)
G158074 scn8aa,LOC107695818,LOC107563626 non-coding upstream 68714 15818461 ~ 15827933 (+)
G158068 NA non-coding upstream 150358 15745117 ~ 15746289 (+)
G158056 LOC107695735,LOC107745457,LOC107571782,LOC107668551,LOC107570234 non-coding upstream 154986 15740636 ~ 15741661 (+)
G158061 NA non-coding upstream 176641 15717790 ~ 15720006 (+)
G158117 NA non-coding downstream 15331 15964752 ~ 15965764 (+)
G158423 NA non-coding downstream 590115 16539536 ~ 16539832 (+)
LOC122328367 NA non-coding downstream 596420 16545841 ~ 16573057 (+)
G158430 LOC107660256 non-coding downstream 599818 16549239 ~ 16549606 (+)
G158434 NA non-coding downstream 605996 16555417 ~ 16555642 (+)
G157620 NA other upstream 592097 15300704 ~ 15304550 (+)
G157656 megf11,LOC107583869,LOC107672222,LOC107596974,LOC107686294 other upstream 900502 14992350 ~ 14996145 (+)
LOC122328907 mef2d,LOC107741762,LOC107549240,LOC107717782,LOC107597970,LOC107663114,LOC107689865 other upstream 1138430 14725910 ~ 14758217 (+)
LOC122328914 szrd1,LOC107673108,LOC107716129,LOC107737539,LOC107687433,LOC105899027 other upstream 1182092 14712147 ~ 14714555 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other upstream 1210029 14680860 ~ 14686618 (+)
G158152 rps26,RPS26,rps26l,LOC107563646 other downstream 34249 15983670 ~ 16083529 (+)
G158162 dnajc22,LOC107708801,LOC107716089,LOC107563648,LOC107571715,LOC107695753 other downstream 72778 16022199 ~ 16023394 (+)
LOC122328571 kmt2d,LOC107681934,LOC107716211,LOC107695802,LOC107563643 other downstream 632549 16581970 ~ 16607408 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other downstream 671777 16621198 ~ 16664314 (+)
LOC122328551 atf7b,atf7a,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107563644,LOC107695816 other downstream 686025 16635446 ~ 16669648 (+)

Expression


Co-expression Network