G158484


Basic Information

Item Value
gene id G158484
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 16728101 ~ 16728343 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234706
GACGAGTCTGTGACCCTCAGCTGCTCATATAATACAAGCAGCAGTTATGTTTATCTGTACTGGTACAGACAGTATCCTGACGGAGAGCTtcactatttattatttgagcCTGCGCGATCAGCTAGTGCAAGAGGGACACCTGATGATCCTCGCTTTCGGTCGACTACATCACACACATCCACTCAACTCATTATTACTGGTGTAACTCTCTCAGATTCAGCTCTCTATTATTCAGCCCAGTGA

Function

GO: NA

KEGG:

id description
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease
ko04940 Type I diabetes mellitus

RNA

RNA id representative length rna type GC content exon number start site end site
TU234706 True 243 lncRNA 0.45 1 16728101 16728343

Neighbor

gene id symbol gene type direction distance location
LOC122329053 neurog1,LOC107598364,LOC107741101,LOC107664747,LOC107710304,LOC107662038,LOC107563607 coding downstream 46413 16680306 ~ 16681688 (-)
LOC122329052 LOC107716220,LOC107695793,LOC107586565,LOC107683357,LOC107571777,LOC107708795 coding downstream 50734 16674237 ~ 16677367 (-)
LOC122328572 acvr1ba,LOC107708859,LOC107570552,LOC107681940,LOC107716207,LOC107563637,LOC107695803 coding downstream 111762 16609478 ~ 16616339 (-)
LOC122328366 LOC107708845,LOC107682000,LOC107570669,LOC107716098,LOC107695785,LOC107586560,LOC107586530 coding downstream 182413 16541514 ~ 16545688 (-)
ribc1 LOC107681983,LOC107708847,LOC107570642,LOC107695788,LOC107586532,LOC107716094 coding downstream 222298 16488226 ~ 16505803 (-)
plxna2 plxna2,LOC107594012,LOC108425528 coding upstream 103742 16832085 ~ 17007286 (-)
hrct1 chia,LOC107671898,LOC107594041,LOC107756356 coding upstream 442770 17171113 ~ 17176489 (-)
itga5 itga5,LOC107671874,LOC107697976,LOC107594039 coding upstream 486256 17214599 ~ 17258164 (-)
csrnp2 csrnp2,LOC107671888,LOC107715040,LOC107594006,LOC107598537,LOC107756414 coding upstream 565835 17294178 ~ 17302565 (-)
tfcp2 tfcp2,LOC107671887,LOC107715039,LOC107756415,LOC106572516 coding upstream 574868 17303211 ~ 17315390 (-)
G158483 NA non-coding downstream 386 16727438 ~ 16727715 (-)
G158481 NA non-coding downstream 3698 16723931 ~ 16724403 (-)
G158462 NA non-coding downstream 120141 16607461 ~ 16607960 (-)
G158432 NA non-coding downstream 174706 16553043 ~ 16553395 (-)
G158417 masp2,LOC107571531,LOC107708846 non-coding downstream 197005 16530052 ~ 16531096 (-)
G158587 NA non-coding upstream 353864 17082207 ~ 17082684 (-)
G158591 NA non-coding upstream 424482 17152825 ~ 17225569 (-)
G158605 NA non-coding upstream 561628 17289971 ~ 17291543 (-)
G158608 dazap2,LOC107715036,LOC107594003,LOC107671873,LOC107756418,LOC107598568 non-coding upstream 582985 17311328 ~ 17338919 (-)
G158628 NA non-coding upstream 654999 17383342 ~ 17386554 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other downstream 369396 16355369 ~ 16358705 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other downstream 484706 16240810 ~ 16243395 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other downstream 558267 16143833 ~ 16169834 (-)
G158231 NA other downstream 719186 16008106 ~ 16008915 (-)
LOC122329227 NA other downstream 1010851 15621942 ~ 15717250 (-)
slc48a1a slc48a1a,LOC107671836,LOC107598487,LOC107594008,LOC107756371,LOC107697869,LOC107757747 other upstream 448282 17176625 ~ 17184385 (-)
G158609 NA other upstream 610924 17339267 ~ 17343385 (-)
coq10a si:dkey-190g6.2,LOC107671896,LOC107715030,LOC107598614,LOC107697969,LOC102210977,LOC108425511,LOC102797363 other upstream 685360 17413703 ~ 17422517 (-)
march9 march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772 other upstream 1317583 18045926 ~ 18058739 (-)
hnrnpa1b hnrnpa1b,LOC107664187,LOC107714994,LOC107707002 other upstream 1503300 18231643 ~ 18235536 (-)

Expression


Co-expression Network