G158569


Basic Information

Item Value
gene id G158569
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17358364 ~ 17405040 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234835
aaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaagagtcttaTTCATTGACAGAAAACCGAATTAGCACATCTGTTTATCCGCTTTTTGGACATTGCCATTGGCTGATAATCTGAAAAATCTGATCTAAGATCTGATCTATCGCTAGCCTCTACTGTGGAAGATCTGATTGAATGTAATTTGAACCTGGCTCTTTATATGCATGACAAACCGGCTGCATGGTGCTGTATATTCTGATTCTTTCATAATCTCTGTGCCAGACACAATGgtaatttgtgaaaaaaaaagaacatttgcatACAATGTGTTAACACAAAGCACACGGTGTGCACATACAGCAAGTTTTGAACATCTCCAAAGTATTGCAGTGTAAGTACACGGGCTGTTCTTGCTGTAACAGTACAAAATCAATGACTCACACTGCATGCTGCTGTTTACAGAAGCCTCATAAGGTCTCCAGCATACATCACGTCTCTTTATAAACGTCGAGCCCTGCTGTGCGCAGTTTCACACAGAGAGTAACCATATTTTAACTGACAGGCGAACTATTTAATTTCATTGCCATTGTCATGCATATGCAAATTTCACGTTAACAGATCAAATGTGCCAAATACTCTGTGACCAAACCTTTCGGTACTGACTTGTGTTACAATTATGAATGTGGCagtttgtgcatttaataattttattttatatttatttgtaagatTATTTATGCagggtttttttcatttatatttttgaccaAAAAGAGGTCTGTAAATTTTGTTTAATCATGTGGTAAAATCAGAGTACTTTTATAGACAATgtctaaaaaaaagcatgtatttGCATATGCGCTTTTATAGATAAACTGCCTTTCAGTAACTTTGGGTCGGTAAGATATTTtagaagaaattaatacttttatttgtcaATGCTGTTCATATTAACtaatcaaagaataaaaaaagtgattccacaaaaatattaagcagcagagcatatattgatattaagataaatgttatttactgATACTAGAATGCTGAAGCAGTTTAAATTAACTTTGCCATCACAGTAataagttgttttttaaatatatatttaaatagacagcagttattttaaactgcaataatatttcacgatatCACTGTTCATATTTGACTAAGCaaatgctgccttggtgagcataaaattCTTACCGTCCCCACagttttgaatggtagtgtacataAGAATATGCAGGTTTTATCGAGAAGTTCACCAGCTCATGACATTCTTTAAACATAAAGCTTATGAGAAAATCAAATTGGACAAAATGACTATTAAAGCAGGCTAGAGTCATAGAACACAAGATATGAGCCGTCCCACCTGCCTTCAACTTTCTCATTCACCTACcaattaatgattttttgtgACCTTCATGTATTGCTGAAATGTGTATGTAGAAACCTTGTAAGTTTTGTGTGTTGACATTGTGATGCAACTAAGCAAGTTACATATCCCAGAATGTCCTGTTGTGCTGTAGGTCCAAGAAAATCCTTCCTGCCAGAGCCATGACAATGTTACAGGCAGCATGAAGTCTGAAATGAACGTCCTTGAGCCTCTGTatctatatatttgtatttaatgacCCTTTTCCAATAAAGTCTGAAATCTTTGTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234835 True 1657 lncRNA 0.34 2 17358364 17405040

Neighbor

gene id symbol gene type direction distance location
si:ch211-210c8.6 si:ch211-210c8.6,LOC107756419,LOC107598584,LOC105906836,LOC106567173 coding upstream 3954 17349249 ~ 17354410 (+)
dazap2 dazap2,LOC107715036,LOC107671873,LOC107756418,LOC107697974,LOC107594003,LOC107598568 coding upstream 19428 17333245 ~ 17338936 (+)
rapgef3 rapgef3,LOC107723737,LOC107671875,LOC107598495,LOC107697977,LOC107756413 coding upstream 143872 17180872 ~ 17214492 (+)
LOC122328573 NA coding upstream 196128 17155195 ~ 17162236 (+)
LOC122328394 asb8,LOC107745463,LOC107681993,LOC107570421,LOC107563629,LOC107695815 coding upstream 738661 16617169 ~ 16619703 (+)
cs cs,LOC107707042,LOC107715034,LOC107671863,LOC107697968 coding downstream 418 17405458 ~ 17416655 (+)
LOC122328977 LOC107671833,LOC107715029,LOC107598604,LOC107707038,LOC107697965,LOC107593998 coding downstream 23417 17428457 ~ 17432713 (+)
fam50a fam50a,LOC107707036,LOC107598596,LOC107671832,LOC107697964,LOC107715033 coding downstream 33477 17438517 ~ 17444127 (+)
si:ch211-207e14.4 LOC107707035,LOC107697962,LOC107598648,LOC107671899,LOC107594033 coding downstream 39482 17444522 ~ 17452097 (+)
sars1 sars,LOC107697960,LOC107671868 coding downstream 49415 17454455 ~ 17460470 (+)
G158550 NA non-coding upstream 47572 17308713 ~ 17310792 (+)
G158543 csrnp2,LOC107671888,LOC107598537,LOC107715040,LOC107594006,LOC107756414 non-coding upstream 61906 17294071 ~ 17296458 (+)
G158542 NA non-coding upstream 66821 17289944 ~ 17291543 (+)
G158527 NA non-coding upstream 177907 17179431 ~ 17180457 (+)
LOC122328456 NA non-coding upstream 205032 17151981 ~ 17153332 (+)
G158579 NA non-coding downstream 14986 17420026 ~ 17420643 (+)
G158573 NA non-coding downstream 15682 17420722 ~ 17422300 (+)
G158726 NA non-coding downstream 405545 17810585 ~ 17810812 (+)
G158754 LOC107714950,LOC107664163,LOC107706981,LOC107563148,LOC107697872,LOC107599688 non-coding downstream 517530 17922570 ~ 17923679 (+)
G158775 NA non-coding downstream 539893 17944933 ~ 17945141 (+)
G158523 NA other upstream 186525 17105498 ~ 17171839 (+)
G158524 NA other upstream 275709 17082205 ~ 17082655 (+)
G158486 NA other upstream 625480 16731346 ~ 16732884 (+)
LOC122328551 atf7b,atf7a,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107563644,LOC107695816 other upstream 688716 16635446 ~ 16669648 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other upstream 694050 16621198 ~ 16664314 (+)
si:ch211-148l7.4 LOC107715028,LOC107671835,LOC107593999,LOC107697967,LOC107706980 other downstream 18080 17423120 ~ 17426633 (+)
snrpg snrpg,LOC107671841,LOC107594056,LOC107598637,LOC107706979 other downstream 21693 17426733 ~ 17428031 (+)
camk2n1b camk2n1b,LOC107664141,LOC107714949,LOC107706982,LOC107563146,LOC107599136 other downstream 406029 17811069 ~ 17856534 (+)
G158789 march9,LOC107664138,LOC107593952,LOC107697857,LOC107714987,LOC107706970,LOC107599679,LOC105912704 other downstream 652074 18057114 ~ 18058917 (+)
fam110c LOC107714930,LOC107664105,LOC107593987 other downstream 1236454 18641494 ~ 18644692 (+)

Expression


Co-expression Network