G158579


Basic Information

Item Value
gene id G158579
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17420026 ~ 17420643 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234847
GACCAGATGTGGCCGGACGTGGCTGATCATTGAAGTATATCGCTCAAGAACCGGAGGGAAGCCCACTTCCAGCTGAGCTTTGGCATGACCGGCTCTTTTCATGATGGTCTGGGACTTTTTACACCACGGTACAAAGTGTTTGTAGTCATCCACGTTGGCTACGACATCATACATCTCTTGCATCGAGTACCTACAGATCAAAATACACCTGCTCTACCTCCACTAGATCGATACAGctctgttcatttattatttaacaccaCAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234847 True 268 lncRNA 0.46 2 17420026 17420643

Neighbor

gene id symbol gene type direction distance location
cs cs,LOC107707042,LOC107715034,LOC107671863,LOC107697968 coding upstream 3371 17405458 ~ 17416655 (+)
LOC122329248 LOC107671862,LOC107756420,LOC107697970,LOC101886435,LOC107594036,LOC108425513 coding upstream 17178 17362363 ~ 17402848 (+)
si:ch211-210c8.6 si:ch211-210c8.6,LOC107756419,LOC107598584,LOC105906836,LOC106567173 coding upstream 65616 17349249 ~ 17354410 (+)
dazap2 dazap2,LOC107715036,LOC107671873,LOC107756418,LOC107697974,LOC107594003,LOC107598568 coding upstream 81090 17333245 ~ 17338936 (+)
rapgef3 rapgef3,LOC107723737,LOC107671875,LOC107598495,LOC107697977,LOC107756413 coding upstream 205534 17180872 ~ 17214492 (+)
LOC122328977 LOC107671833,LOC107715029,LOC107598604,LOC107707038,LOC107697965,LOC107593998 coding downstream 7814 17428457 ~ 17432713 (+)
fam50a fam50a,LOC107707036,LOC107598596,LOC107671832,LOC107697964,LOC107715033 coding downstream 17874 17438517 ~ 17444127 (+)
si:ch211-207e14.4 LOC107707035,LOC107697962,LOC107598648,LOC107671899,LOC107594033 coding downstream 23879 17444522 ~ 17452097 (+)
sars1 sars,LOC107697960,LOC107671868 coding downstream 33812 17454455 ~ 17460470 (+)
chchd6a chchd6a,LOC107715026,LOC107671869,LOC107593996,LOC107697961,LOC107707034,LOC107598676 coding downstream 40619 17461262 ~ 17518098 (+)
G158569 NA non-coding upstream 14986 17358364 ~ 17405040 (+)
G158550 NA non-coding upstream 109234 17308713 ~ 17310792 (+)
G158543 csrnp2,LOC107671888,LOC107598537,LOC107715040,LOC107594006,LOC107756414 non-coding upstream 123568 17294071 ~ 17296458 (+)
G158542 NA non-coding upstream 128483 17289944 ~ 17291543 (+)
G158527 NA non-coding upstream 239569 17179431 ~ 17180457 (+)
G158573 NA non-coding downstream 79 17420722 ~ 17422300 (+)
G158726 NA non-coding downstream 389942 17810585 ~ 17810812 (+)
G158754 LOC107714950,LOC107664163,LOC107706981,LOC107563148,LOC107697872,LOC107599688 non-coding downstream 501927 17922570 ~ 17923679 (+)
G158775 NA non-coding downstream 524290 17944933 ~ 17945141 (+)
G158810 LOC107714990,LOC107593956,LOC107664165 non-coding downstream 744953 18165596 ~ 18173699 (+)
G158523 NA other upstream 248187 17105498 ~ 17171839 (+)
G158524 NA other upstream 337371 17082205 ~ 17082655 (+)
G158486 NA other upstream 687142 16731346 ~ 16732884 (+)
LOC122328551 atf7b,atf7a,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107563644,LOC107695816 other upstream 750378 16635446 ~ 16669648 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other upstream 755712 16621198 ~ 16664314 (+)
si:ch211-148l7.4 LOC107715028,LOC107671835,LOC107593999,LOC107697967,LOC107706980 other downstream 2477 17423120 ~ 17426633 (+)
snrpg snrpg,LOC107671841,LOC107594056,LOC107598637,LOC107706979 other downstream 6090 17426733 ~ 17428031 (+)
camk2n1b camk2n1b,LOC107664141,LOC107714949,LOC107706982,LOC107563146,LOC107599136 other downstream 390426 17811069 ~ 17856534 (+)
G158789 march9,LOC107664138,LOC107593952,LOC107697857,LOC107714987,LOC107706970,LOC107599679,LOC105912704 other downstream 636471 18057114 ~ 18058917 (+)
fam110c LOC107714930,LOC107664105,LOC107593987 other downstream 1220851 18641494 ~ 18644692 (+)

Expression


Co-expression Network