G158587


Basic Information

Item Value
gene id G158587
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17082207 ~ 17082684 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234860
aaggggaaaagtgtccaaataaaagggggatctggtgtcctcgtcgtgctccgggtaacgtgcaggtttaggccgtgttccagggggggaagggtccaggtaaggggcggagtccggcggtcgcacgcgctcccctttttctggcccggggcgcgaggggcggcggcttcttccgcggcgtctccgtcgtttctttgctccggcggcagagtgggatgagctgtgtgctcacagcctggactacgggggtcccacgacgcacttctcggacggcggggtgaggtccatcgcgcacccttcctggacccacgaggacaccagcgtgcatgcacgggggaagagaccg
>TU234861
tatatatatatatatatatatatatatatatatagtgacgggaggagccaacgacagacacagtgggcgtggcgtcaggcctcggagaggctttttattattgacaaaataataatacaaaataaagtgtccaaggggaaaagtgtccaaataaaagggggatctggtgtcctcgtcgtgctccgggtaacgtgcaggtttaggccgtgttccagggggggaagggtccaggtaaggggcggagtccggcggtcgcacgcgctcccctttttctggcccggggcgcgaggggcggcggcttcttccgcggcgtctccgtcgtttctttgctccggcggcagagtgggatgagctgtgtgctcacagcctggactacgggggtcccacgacgcacttctcggacggcggggtgaggtccatcgcgcacccttcctggacccacgaggacaccagcgtgcatgcacgggggaagagaccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234860 False 346 lncRNA 0.66 1 17082207 17082552
TU234861 True 478 lncRNA 0.57 1 17082207 17082684

Neighbor

gene id symbol gene type direction distance location
plxna2 plxna2,LOC107594012,LOC108425528 coding downstream 74921 16832085 ~ 17007286 (-)
LOC122329053 neurog1,LOC107598364,LOC107741101,LOC107664747,LOC107710304,LOC107662038,LOC107563607 coding downstream 400519 16680306 ~ 16681688 (-)
LOC122329052 LOC107716220,LOC107695793,LOC107586565,LOC107683357,LOC107571777,LOC107708795 coding downstream 404840 16674237 ~ 16677367 (-)
LOC122328572 acvr1ba,LOC107708859,LOC107570552,LOC107681940,LOC107716207,LOC107563637,LOC107695803 coding downstream 465868 16609478 ~ 16616339 (-)
LOC122328366 LOC107708845,LOC107682000,LOC107570669,LOC107716098,LOC107695785,LOC107586560,LOC107586530 coding downstream 536519 16541514 ~ 16545688 (-)
hrct1 chia,LOC107671898,LOC107594041,LOC107756356 coding upstream 88429 17171113 ~ 17176489 (-)
itga5 itga5,LOC107671874,LOC107697976,LOC107594039 coding upstream 131915 17214599 ~ 17258164 (-)
csrnp2 csrnp2,LOC107671888,LOC107715040,LOC107594006,LOC107598537,LOC107756414 coding upstream 211494 17294178 ~ 17302565 (-)
tfcp2 tfcp2,LOC107671887,LOC107715039,LOC107756415,LOC106572516 coding upstream 220527 17303211 ~ 17315390 (-)
pou6f1 pou6f1,LOC107671889,LOC107715037,LOC107598516,LOC107756417,LOC107697973 coding upstream 233944 17316628 ~ 17330887 (-)
G158484 NA non-coding downstream 353864 16728101 ~ 16728343 (-)
G158483 NA non-coding downstream 354492 16727438 ~ 16727715 (-)
G158481 NA non-coding downstream 357804 16723931 ~ 16724403 (-)
G158462 NA non-coding downstream 474247 16607461 ~ 16607960 (-)
G158432 NA non-coding downstream 528812 16553043 ~ 16553395 (-)
G158591 NA non-coding upstream 70141 17152825 ~ 17225569 (-)
G158605 NA non-coding upstream 207287 17289971 ~ 17291543 (-)
G158608 dazap2,LOC107715036,LOC107594003,LOC107671873,LOC107756418,LOC107598568 non-coding upstream 228644 17311328 ~ 17338919 (-)
G158628 NA non-coding upstream 300658 17383342 ~ 17386554 (-)
G158632 NA non-coding upstream 311337 17394021 ~ 17395422 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other downstream 723502 16355369 ~ 16358705 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other downstream 838812 16240810 ~ 16243395 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other downstream 912373 16143833 ~ 16169834 (-)
G158231 NA other downstream 1073292 16008106 ~ 16008915 (-)
LOC122329227 NA other downstream 1364957 15621942 ~ 15717250 (-)
slc48a1a slc48a1a,LOC107671836,LOC107598487,LOC107594008,LOC107756371,LOC107697869,LOC107757747 other upstream 93941 17176625 ~ 17184385 (-)
G158609 NA other upstream 256583 17339267 ~ 17343385 (-)
coq10a si:dkey-190g6.2,LOC107671896,LOC107715030,LOC107598614,LOC107697969,LOC102210977,LOC108425511,LOC102797363 other upstream 331019 17413703 ~ 17422517 (-)
march9 march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772 other upstream 963242 18045926 ~ 18058739 (-)
hnrnpa1b hnrnpa1b,LOC107664187,LOC107714994,LOC107707002 other upstream 1148959 18231643 ~ 18235536 (-)

Expression


Co-expression Network