G158706 (LOC107599375,LOC107715025,LOC107671876,LOC107594031,LOC104946192)


Basic Information

Item Value
gene id G158706
gene name LOC107599375,LOC107715025,LOC107671876,LOC107594031,LOC104946192
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17746530 ~ 17748502 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU235009
CAGGAAGTCAAACATGTATTTAATGGCGAGAGGGAGGGCACTGCCACGTGAGCCGTGCTGAATATCGTCTCAAACAAATCATCGACAAATTTCTGTAAAGTACCCTTGGTGGCCAGCAGTCGTGTCAGGTAGATCTCTGACACCATCTTGCTCCCGCGATCTCCCTCTCGTTGGTCTGCATGGTCGTGGTTTTTGACAAGGTGCCAGAGTTTGGTACCGCTCTCTAGATCGGGTGTGATCATGGGCGTCCTGGACCGCAGACTGTCTGGGCTGCTGGCCGTCCTCAACATAC

Function

NR:

description
PREDICTED: plexin-A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235009 True 292 lncRNA 0.53 2 17746530 17748502

Neighbor

gene id symbol gene type direction distance location
tmed4 tmed4,LOC107594055,LOC107671834,LOC107715031,LOC107598625,LOC107697966,LOC107707037 coding downstream 308517 17433732 ~ 17438013 (-)
racgap1 racgap1,LOC107671897,LOC107594001,LOC107697971,LOC107756422,LOC107714933,LOC107599350 coding downstream 385146 17354147 ~ 17361384 (-)
bin2a LOC107671903,LOC107715035,LOC107594002,LOC107697868,LOC107598577,LOC107756358 coding downstream 395582 17344102 ~ 17350948 (-)
pou6f1 pou6f1,LOC107671889,LOC107715037,LOC107598516,LOC107756417,LOC107697973 coding downstream 415643 17316628 ~ 17330887 (-)
tfcp2 tfcp2,LOC107671887,LOC107715039,LOC107756415,LOC106572516 coding downstream 431140 17303211 ~ 17315390 (-)
LOC122328974 agmat,LOC107714919,LOC102790280 coding upstream 24903 17773405 ~ 17777920 (-)
pink1 pink1,LOC107714979,LOC107697909,LOC107751829 coding upstream 29972 17778474 ~ 17784124 (-)
LOC122328575 LOC107714980,LOC107664226,LOC107563140,LOC107664227,LOC107714944 coding upstream 36213 17784715 ~ 17786242 (-)
LOC122328417 LOC107563141,LOC107563138,LOC107664227,LOC107751839,LOC107599502,LOC107714980,LOC107664226,LOC107563140 coding upstream 39095 17787597 ~ 17788930 (-)
LOC122328416 LOC107599143,LOC107697854,LOC107751854,LOC107714945,LOC107563142,LOC107664148 coding upstream 40478 17788980 ~ 17796430 (-)
G158632 NA non-coding downstream 351108 17394021 ~ 17395422 (-)
G158628 NA non-coding downstream 359976 17383342 ~ 17386554 (-)
G158608 dazap2,LOC107715036,LOC107594003,LOC107671873,LOC107756418,LOC107598568 non-coding downstream 407611 17311328 ~ 17338919 (-)
G158605 NA non-coding downstream 454987 17289971 ~ 17291543 (-)
G158591 NA non-coding downstream 520961 17152825 ~ 17225569 (-)
LOC122328377 NA non-coding upstream 51340 17799842 ~ 17844102 (-)
G158774 NA non-coding upstream 195423 17943925 ~ 17944160 (-)
G158887 NA non-coding upstream 251331 17999833 ~ 18001690 (-)
G158892 NA non-coding upstream 263624 18012126 ~ 18015877 (-)
G158882 NA non-coding upstream 293408 18041910 ~ 18043476 (-)
coq10a si:dkey-190g6.2,LOC107671896,LOC107715030,LOC107598614,LOC107697969,LOC102210977,LOC108425511,LOC102797363 other downstream 324013 17413703 ~ 17422517 (-)
G158609 NA other downstream 403145 17339267 ~ 17343385 (-)
slc48a1a slc48a1a,LOC107671836,LOC107598487,LOC107594008,LOC107756371,LOC107697869,LOC107757747 other downstream 562145 17176625 ~ 17184385 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other downstream 1387825 16355369 ~ 16358705 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other downstream 1503135 16240810 ~ 16243395 (-)
march9 march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772 other upstream 297424 18045926 ~ 18058739 (-)
hnrnpa1b hnrnpa1b,LOC107664187,LOC107714994,LOC107707002 other upstream 483141 18231643 ~ 18235536 (-)
hoxc1a LOC107598919,LOC107707004,LOC107697929,LOC107594049,LOC107664160,LOC107714959 other upstream 547544 18296046 ~ 18302575 (-)
hoxc6a hoxc6a,LOC107593966,LOC107664205,LOC107714999,LOC107706971,LOC107697939,LOC107598897 other upstream 593832 18342334 ~ 18350347 (-)
G159076 LOC107715021,LOC107664216,LOC107593990,LOC107598736,LOC107697953,LOC107707026 other upstream 998889 18747391 ~ 18754712 (-)

Expression


Co-expression Network