G158789 (march9,LOC107664138,LOC107593952,LOC107697857,LOC107714987,LOC107706970,LOC107599679,LOC105912704)


Basic Information

Item Value
gene id G158789
gene name march9,LOC107664138,LOC107593952,LOC107697857,LOC107714987,LOC107706970,LOC107599679,LOC105912704
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 18057114 ~ 18058917 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU235116
GGCGTTTGTTTACCTGCTCGGGCCCTTGGAAGCAGATCCGACACTGAGGCGTTCTCATGCCGCTGCCCGTGCTGCTGGTGAGGCTGACCGCGTCCAGGCCCGCCTGCAGTTTGGGGTCTTTCTCCTCGAACGCCAGGCTCCTGGGCCTGGGGTCGCTCCCGTAGTACTCTTCCTCGTCGTCGCGGCTGGAGCAGTCCACGAAGGGCGGCCATCCGCAGCCGCCCATCCCGAGCCCCCTCATGCTGCTGTTGGGTCGTCTGCTCGGCTCTGCGTCACTGTCGGAGCGTCTAGAACCGGATCGCATAAAAACCAGCACCTTCAGTTCGTTAAAAAACATGCGGATCCGGTTCTTGAACATCTTTGACTACATGTGTATGTCGTATGGCTGAAgtgaatttttgaattttttttttttttacgaaaggagtattgatttatatatatatatatacgaataTTATTATGCttgataattattattgttgttgtttttatatagcGTTAGTGTTTTTTAcgcattattgtttttattagtattatttgatttattattgatCCCGTTAGgcctattattaatatttcattcgGCAGAAACGCAGTTGCTACCCTGAAGTCTCAGAGGAAAGTGTCCAAACCAAAGGTAATTGGTCAGAAAATCTCCAGGCTTGTTATTTTCCGTCTGATGGCATGTATGTGCCTGTTAGGGCCGATGTTGTTTCTCTGATACAATCATCGCTGGCCGCGAGGATGACAATAATAAGACTACGGTATTGCGATGAATAGCCAACAATGCATTGTTTCCAGGTCTAAAGAGATGCGATTTTCACAAACTCCCAGCAATCCACAGCCTGGACGCGCGGATGAGAGACAGGGAAGATGCAAAATGGCATTTCAGAGCATCGCTGCCACACACAGTCATCGTCGGGTGGGGGGGGGGATCCTTcagcataaaaacataatccAAAAGAGCTGAAAGCTGGATTCGGGCGCAATCCTATAgttttgtttattgttcatCAGAGGCGTCATGACGAAGCTTTCACATCATTTCCTTGTGCATCTTCCCATCGACATATTCCGACGCCACCTCCCATCCCAAACGCAGAGTTTAGAACAATCCATTAGGTTGGTGCTTCAAAAACGGCAATAACGACGGCGGGCATCGGATGAAGAGCTGGGGGGGGAAACGCCAGCATCTTGTCTCCATTTGAAGTTCACCATCACCATCCCCCTCCCGGGCCGATATGGTTCCTCGCCACGTTCAAAGGAAGATGGAGCTTCCagaagggaaaaaataaaaaggcgcCGCGCTTAGGTTCGCCTATTTTCCTCCTCCGCGGGGTGCGATGGCGGTCGGTCGGAGCGGCTGATGCCGTGGATCGTAATGTGATGGGGATGCTGATGCTGCTCCCCTCTGATTCATCCTCGAAATGGACGTTCTGCCGTGCGCATCAACACACGGCCCTTGTTTCCAAGGCGCGCTCTCGCCCaatcaaaatgattcatttacaaacGTCTCGCTGCCGTGCGCGCCCCCTGCTCCGTTCTCCTTTGGGAGATTCCAAGTGTATGCTGGATTTCGACGGGCGCCGCTGTCCGAGGTGCTGATCTCTCGTCGTGACGTTTCCTCTGCGTGTCAGCGGGACGCGGCGGGAAATATAAACGTGACCCCGGAccgcaaaaccagtcataagcagATTGCATGGCTCCAAATGATCCGTTTTCCCTTTATGTCAAAAATCTCCTGGATATTAAGTAGAGAGCGTGTTCCATAAAGATAGTTTTCTACAGTTATCGCATTGCt

Function

symbol description
march9 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MARCHF9 (membrane associated ring-CH-type finger 9).

NR:

description
PREDICTED: E3 ubiquitin-protein ligase MARCH9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235116 True 1804 TUCP 0.50 1 18057114 18058917

Neighbor

gene id symbol gene type direction distance location
hipk1a hipk1a,LOC107697916,LOC107664210,LOC107599082 coding upstream 13626 18025464 ~ 18043488 (+)
ube2j2 ube2j2,LOC107706988,LOC107599097,LOC107664234,LOC107697915,LOC107593951 coding upstream 32415 18019331 ~ 18024699 (+)
acap3a LOC107706985,LOC107664201,LOC107697914,LOC107714984 coding upstream 38928 17948406 ~ 18018186 (+)
ints11 cpsf3l,LOC107697912 coding upstream 121767 17926849 ~ 17935347 (+)
ddx19a zgc:193690,LOC107664213,LOC107563149,LOC107706984,LOC107697911,LOC107599485,LOC108433381 coding upstream 134747 17916220 ~ 17922367 (+)
agap2 agap2,LOC107664212,LOC107593954,LOC107697918,LOC107599465 coding downstream 14568 18073485 ~ 18093676 (+)
LOC122329029 zbtb39,LOC107664103,LOC107714954,LOC107697919,LOC107706990,LOC107579784 coding downstream 36695 18095612 ~ 18102114 (+)
spryd3 spryd3,LOC107714925,LOC107664113 coding downstream 64652 18123569 ~ 18161732 (+)
zgc:174906 LOC107714991,LOC107664166,LOC107593958,LOC107697924,LOC107706998,LOC107599005 coding downstream 120186 18179103 ~ 18183697 (+)
csad csad,LOC107664139,LOC107706996,LOC107697858,LOC107599458 coding downstream 124925 18183842 ~ 18190376 (+)
G158775 NA non-coding upstream 111973 17944933 ~ 17945141 (+)
G158754 LOC107714950,LOC107664163,LOC107706981,LOC107563148,LOC107697872,LOC107599688 non-coding upstream 133435 17922570 ~ 17923679 (+)
G158726 NA non-coding upstream 246302 17810585 ~ 17810812 (+)
G158573 NA non-coding upstream 634814 17420722 ~ 17422300 (+)
G158579 NA non-coding upstream 636471 17420026 ~ 17420643 (+)
G158810 LOC107714990,LOC107593956,LOC107664165 non-coding downstream 106679 18165596 ~ 18173699 (+)
G158817 NA non-coding downstream 143259 18202176 ~ 18202492 (+)
G158818 NA non-coding downstream 145522 18204439 ~ 18204707 (+)
G158821 NA non-coding downstream 161076 18219993 ~ 18220332 (+)
G158822 NA non-coding downstream 186548 18245465 ~ 18246812 (+)
camk2n1b camk2n1b,LOC107664141,LOC107714949,LOC107706982,LOC107563146,LOC107599136 other upstream 200580 17811069 ~ 17856534 (+)
snrpg snrpg,LOC107671841,LOC107594056,LOC107598637,LOC107706979 other upstream 629083 17426733 ~ 17428031 (+)
si:ch211-148l7.4 LOC107715028,LOC107671835,LOC107593999,LOC107697967,LOC107706980 other upstream 630481 17423120 ~ 17426633 (+)
G158523 NA other upstream 885275 17105498 ~ 17171839 (+)
G158524 NA other upstream 974459 17082205 ~ 17082655 (+)
fam110c LOC107714930,LOC107664105,LOC107593987 other downstream 582577 18641494 ~ 18644692 (+)
G159081 NA other downstream 713033 18771950 ~ 18789618 (+)
LOC122328754 LOC107715022,LOC107593991,LOC107697954,LOC107664193,LOC564564,LOC107598698,LOC107707027,LOC108432721 other downstream 740655 18799572 ~ 18814653 (+)

Expression


Co-expression Network