G158880


Basic Information

Item Value
gene id G158880
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 18544910 ~ 18545490 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU235245
GCAAAGCAACACACAACTCTACAACGACAGCCTCAAACCCGTCATAAACCGCTGCATCTGCTATTTATTTGCTCCCAAATGCATCTGATAGGCACTATGCATGCATCTGATCGATGGTGTTGGGCTGCAGTAGACTTGAAGCTAGTCAAGTCAAAATGTTCCATCTTCTGCTGAGGTTTCGTAATGTCTTCATAAAGGACGCAACAGAACAGACAGCTGAAGGACTGAGTCCAGTGGTACAGAACGAGCCTGTCTTTGGAGTATGGCTTGTGTTCTATCGTGGGCTCGTGACTCTCCTCTCCGTCTGTGATTTTGCCATCTTCGTCCATGGCTGATATGGGCCACCAGCTACAGTTGGTGGGAGTAACATTGTTGGAAGACGCCATGACAGAGGATtttgtgcgtgtgagagaggagcagagagagagagagagagagggagggataGAGAGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235245 True 455 lncRNA 0.49 2 18544910 18545490

Neighbor

gene id symbol gene type direction distance location
mfsd5 mfsd5,LOC107594050,LOC107664134,LOC107599659,LOC107697860,LOC107599644,LOC107706975 coding upstream 9816 18532917 ~ 18535094 (+)
nr1d4a nr1d4a,LOC107715006,LOC107707011,LOC107697943,LOC107593977,LOC107664228,LOC107598823 coding upstream 13408 18516604 ~ 18531502 (+)
calcoco1a calcoco1a,LOC107697941,LOC107593974,LOC107598830,LOC107664191 coding upstream 93024 18437059 ~ 18451886 (+)
cbx5 cbx5,LOC107714996,LOC107664188,LOC103047453,LOC107697930 coding upstream 301207 18235688 ~ 18243703 (+)
nfe2 LOC107593960,LOC107714957,LOC107664150,LOC107707001,LOC107697927,LOC107598932 coding upstream 313020 18215096 ~ 18231890 (+)
jph2 jph2,LOC107707015,LOC107715007,LOC107593978,LOC107697945,LOC107598797,LOC107664110 coding downstream 1739 18547229 ~ 18563142 (+)
LOC122328644 tuba1c,LOC108255233,LOC103148207,LOC102311436,LOC106920718 coding downstream 29708 18575198 ~ 18578740 (+)
tmem18 tmem18,LOC107714962,LOC107594052,LOC107664181,LOC107697861,LOC107706976,LOC107599622 coding downstream 48244 18593734 ~ 18595684 (+)
fbxo25 fbxo25,LOC107715015,LOC107664196,LOC107697951,LOC107707022 coding downstream 100707 18646197 ~ 18653191 (+)
cmtr1 cmtr1,LOC107715019 coding downstream 129124 18674614 ~ 18689276 (+)
G158830 hoxc8,LOC107714926,LOC107664222,LOC103032829,LOC107593970 non-coding upstream 188376 18296006 ~ 18356534 (+)
G158828 NA non-coding upstream 271418 18273226 ~ 18273492 (+)
G158827 NA non-coding upstream 272067 18272329 ~ 18272843 (+)
LOC122329094 NA non-coding upstream 272983 18250591 ~ 18271927 (+)
G158822 NA non-coding upstream 298098 18245465 ~ 18246812 (+)
G158866 LOC107714908,LOC108433416,LOC107659949 non-coding downstream 19786 18565276 ~ 18569950 (+)
G159002 NA non-coding downstream 55412 18600902 ~ 18601176 (+)
LOC122329080 NA non-coding downstream 76336 18621826 ~ 18623979 (+)
G159018 si:ch211-225h24.2,LOC107715017,LOC107594029,LOC107664242,LOC107697952,LOC107707023,LOC107598767 non-coding downstream 107906 18653396 ~ 18655822 (+)
G159034 NA non-coding downstream 193271 18738761 ~ 18738995 (+)
G158789 march9,LOC107664138,LOC107593952,LOC107697857,LOC107714987,LOC107706970,LOC107599679,LOC105912704 other upstream 485993 18057114 ~ 18058917 (+)
camk2n1b camk2n1b,LOC107664141,LOC107714949,LOC107706982,LOC107563146,LOC107599136 other upstream 688376 17811069 ~ 17856534 (+)
snrpg snrpg,LOC107671841,LOC107594056,LOC107598637,LOC107706979 other upstream 1116879 17426733 ~ 17428031 (+)
si:ch211-148l7.4 LOC107715028,LOC107671835,LOC107593999,LOC107697967,LOC107706980 other upstream 1118277 17423120 ~ 17426633 (+)
G158523 NA other upstream 1373071 17105498 ~ 17171839 (+)
fam110c LOC107714930,LOC107664105,LOC107593987 other downstream 96004 18641494 ~ 18644692 (+)
G159081 NA other downstream 226460 18771950 ~ 18789618 (+)
LOC122328754 LOC107715022,LOC107593991,LOC107697954,LOC107664193,LOC564564,LOC107598698,LOC107707027,LOC108432721 other downstream 254082 18799572 ~ 18814653 (+)

Expression


Co-expression Network