LOC122328332 (mrgbp,LOC107705719,LOC107724191,LOC107696984,LOC107693561)


Basic Information

Item Value
gene id LOC122328332
gene name mrgbp,LOC107705719,LOC107724191,LOC107696984,LOC107693561
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 5859911 ~ 5865217 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223967.1
AGCCAGAGTAATGTCCGGGTGTgttgtatctgtgtgtgttgtcGTGTGTTGATGAAGCGGTGAAGCGTCGCTCAGAGTCGCTGCAGAAACATGGGGGAAGCCGAGGCTGTGCCGTCCGACGAAAAACAAGCAGAAACCGGCATCTGTACCGCCGAGGAATCGATTGTATGGAGCCAGGAGGTGGAAGTGTCTTTTCACGCAATGCTGGGACACAAACCCGTAGGAGTGAATCGACATTTCCACATGATCTGTATTCGCGATAAGTTCAGCCAGAACATCGGCAGGCAGGTGTCCTCTAAAGTCATCTGGGATCACCTGAGCACCATGTATGACATGCAGGCGCTGCATGAATCAGAAATACTCCCGTTTCCAAACTCTGAGAAGAGCTTTGTTCTGCCTGAAGAGATCATACAGGATGTCAAGGAAGGTAAAGTGGGATCTGAAGAAGACGTGAAGGAGGAGTTCAAAGAAGAAAGTGACCCACCTGCAACCCACGAAGAAGGCAGCAATTGCTCCGTGAAGCTTTTGGAGAGGTCGGACAGCGGGcgcgagaaagagagacagcGGGCAGAGAGGGGGGGCTCAGGTGAGACGGGCAGCGGGTCGAAAGAATCAGCCGGggaaaagaggaagaggagtcGAGCCGTGGAAAAGGTGATGAACTCCAGCAACCCCTCCAGCCCTGGGGGAGCCAAACGCCGCAGGACGTAGCCGCAGCTTGCAGCGGGGCGATTCGGGACATCAGACATTTGGAAAGAACTGACGGAGGAAGGCGTAGCTAATATTGGTCTCGCTACAGCCAATGCGAAAGTGAAATGGCGAGCAGGGGATGTGTGATGTTCGTGTGCGTTATCTGCGGTCCAGGGGGTCACTGCCAGAGGTGTTCACTGACGGACGGAGAAAATGTAGACGAAGGAAAGACTTTGGTGGTTTCGTAGGATCTGATTAGACTGAGGGGGAAAGTATGTTAAATAAGCTTTCCTCTGCCGAGTTCGGAAACAAGAcagcaactttttaaaaaaagattcgTGGGAATTTTAAGTggtagctttattttattttcgtcAGAGCTGACGTTCTGGAGACGGACCAGAGAATCAACTAGTTTGTTGTGTGATTTTGTTAGAACTTGCACTGCAAATAAGCTGAGGTAGACGTGTTATATTAACTGTATGAAATAACCTGATCCTATTAGCCAATTAGATTTGATCGTTGATCAAATGCTTAGGAAATAGTGATTGGTATTTGCACTGTTTCGGAGTCatgtttgattaatttatttggaCCGAATATGTGTCGAACACATCAGGAGTATGTCCCTGATTAAAAAATGGTAGTGAACCA

Function

symbol description
mrgbp Predicted to be involved in histone acetylation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. Orthologous to human MRGBP (MRG domain binding protein).

NR:

description
PREDICTED: MRG/MORF4L-binding protein-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043189 H4/H2A histone acetyltransferase complex cellular_component

KEGG:

id description
K11343 MRGBP; MRG-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223967.1 True 1344 mRNA 0.49 6 5859911 5865217

Neighbor

gene id symbol gene type direction distance location
LOC122329222 eef1a2,LOC107724190,LOC107696983,LOC107551525,LOC107705720,LOC107693560,LOC108429306,LOC108276238 coding downstream 1164 5853109 ~ 5858747 (-)
LOC122329283 LOC107696925,LOC107724187,LOC107551517,LOC107594764,LOC107724182 coding downstream 35664 5817641 ~ 5824247 (-)
LOC122329292 LOC107696963,LOC107559168,LOC107746530,LOC107707374,LOC107673558,LOC107598155 coding downstream 133648 5722488 ~ 5726263 (-)
LOC122329296 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding downstream 346523 5509695 ~ 5513388 (-)
LOC122329290 zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507 coding downstream 350351 5505406 ~ 5509560 (-)
sac3d1 LOC107663057,LOC107593949,LOC107724183,LOC107696954,LOC107551515,LOC107705659,LOC107705658 coding upstream 3909 5869126 ~ 5872179 (-)
haus8 haus8,LOC107551529,LOC107696953,LOC107663059,LOC107577736 coding upstream 7077 5872294 ~ 5876865 (-)
pigt LOC107724198,LOC107551531,LOC107696980,LOC107705717,LOC107593938,LOC107663065 coding upstream 21395 5886612 ~ 5893723 (-)
sycp2 LOC107696925 coding upstream 54556 5919773 ~ 5936063 (-)
ppp1r3da ppp1r3da,LOC107722761,LOC107696952,LOC107593910,LOC107551518,LOC107663071 coding upstream 72415 5937632 ~ 5939803 (-)
LOC122329299 NA non-coding downstream 196955 5654018 ~ 5662956 (-)
G155238 NA non-coding downstream 312203 5525041 ~ 5547708 (-)
LOC122329300 NA non-coding downstream 428387 5430546 ~ 5431524 (-)
G155157 NA non-coding downstream 746947 5111844 ~ 5112964 (-)
G155156 NA non-coding downstream 762781 5096532 ~ 5097130 (-)
G155308 NA non-coding upstream 325880 6191097 ~ 6191320 (-)
G155388 NA non-coding upstream 483790 6349007 ~ 6351825 (-)
G155413 NA non-coding upstream 619437 6484654 ~ 6484915 (-)
G155391 krt8,LOC107551542,LOC108411779,LOC107727027,LOC105023875,LOC107681390,LOC107568038,LOC107705700 non-coding upstream 620222 6485439 ~ 6499749 (-)
G155392 LOC107559866,LOC107705699,LOC107666380,LOC108429286 non-coding upstream 644498 6509715 ~ 6514093 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other downstream 363437 5484212 ~ 5496474 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other downstream 380089 5477841 ~ 5479822 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other downstream 404864 5454417 ~ 5455047 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other downstream 1025391 4827478 ~ 4834520 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other downstream 1664913 4173914 ~ 4194998 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other upstream 865634 6730851 ~ 6731886 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other upstream 901391 6766608 ~ 6823032 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other upstream 992790 6858007 ~ 6867300 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other upstream 1099525 6964742 ~ 6981961 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other upstream 1128950 6994167 ~ 7003523 (-)

Expression


Co-expression Network