slco4a1 (slco4a1,LOC107603147,LOC107681874,LOC107559480,LOC107657069,LOC107707756)


Basic Information

Item Value
gene id slco4a1
gene name slco4a1,LOC107603147,LOC107681874,LOC107559480,LOC107657069,LOC107707756
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8114941 ~ 8132951 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224025.1
CGCCATGGGGGGCGGATTCTCATTGGGTCACAGCTGCTTAATCTGAGAGCTCAACATTTTCTAACATCTCCAGCTTAAGCGTTTATTTATGGATTTACGCTGGGAGAGACAGTAAACGCGAACGTGAAACGAAATCGCAATCTGACAGGCAATGGAGGAGTCGTCTAAATCCTCGTCGGCGTGAGAACAACTTTGTTTTCCAAAATCTGTATGACTTCAGTTTAAACTGTGAGAAACTCCAAGGGATCCTTTTTCCAAAAGACTGCCATCGCATCACTCTGCAAAACTACACACAGAATCAGTGTTTTCGATAGAAACGTTTAGATTTTTTACCCTTCACAAAGTCTGTCACAGTGCCCCCTGCTGGGGCCATGCCCCACCTGCTGAACAATGACACTTCCTTCAGCTCCAAGCAAGAGCTCTTGGTCCTACATGACAGTCCACTGGGACCCAGCCTGGACACTCCCAGCCCAGTGGAGTCCCAGGGCTCTGGTCCAAGCAGCCCAACTGGAGATGCCCACACTGTGCTCCACAAGACAGGCTTGTGCTCCACAAAGGGGCTTGACCTCACAGAGCCACCCACTGGGGTGAAGTTTGTTCCGACAGACTCAGAGAATCTTTGTGGATGGGGAGCACTGACCCCACAGTGTATCCAGACCTTCAACACTCCGCGCTGGGTTCTCTTCTTCCTCTGTGTGGCCTCCTTCCTTCAGGGCATGATCATCAACGGCTTCATCAACACCGTTATCACCTCCATCGAAAGACGTTTTGATCTGCGCAGCTACCAGGCGGGACTCATCGCAAGCTCCTATGACATTGCTGCTTGTGTGTGCCTGACATTCGTGAGCTACTTTGGTGGTACTGGTCACAAGCCTCGATGGCTGGGCTGGGGTGTACTCATCATGGCACTGGGCTCTCTGGTCTTTGCTCTGCCCCATTTCACCACACCACCCTATGAGGTGAGAGTCCCAGAGCGCATGGGGCTGTGCTCAGCCAATCACACCGAGACGTGTGTCGGTGAAGAAGGTGGGCTCTCGGCGTACCGTTACGTCTTTATGCTGGGCCAGTTTCTGCACGGGGTTGGAGCAACCCCTTTGTACACCCTCGGGGTCACCTACCTAGATGAGAATGTCAAGTCAAACTACGCACCTGTATATATAGGGATCTTCTACACGGCTGCCATTGTAGGGCCTGCTGCTGGATACTTGCTGGGTGGATTCTTTCTCAACATCTACACAGAAATCGACCAAACgaCAGAGTTGACCCCTGAAAACCCGCTGTGGGTGGGAGCTTGGTGGATTGGTTTCCTGGCAGGAGGTGCAGCAGCTCTGGTTATCGCTCTGCCTATACTGGGTTACCCACGACAGCTACCAGGCTCTCAGCGGTATGTGGCCATGCGGGTCTCAGAGGCCCACCAGCTGAAGGATGGCAGTCAGATCACTGCGGCTGATCCTCAGTTTGGCAAAACAGTAAAAGACATGCCCAGGTCAATGCTGCTTCTTTTAAAGAACCCTACCTTCATCTTCCTGTGTCTCGCTGGTGCCACAGAGGCCACGCTCATAGCTGGAATGTCCACGTTTGGCCCCAAATTTCTAGAGTCTCAGTTTAGTCTGAGTGCTTCAGAGGCAGCAACCTGGTTTGGTTATATGGTGGTACCAGCAGGTGGAGGAGGCACCTTTCTCGGTGGCTTCATTGTAAAGAAGCTGAACCTTCGCTGCCGTGGGATTATTCGTTTCTGTATGCTGTGCGCAGTGGTCAGTCTGTCGGCTATCTTCATATTTTTGGTACACTGTCCTAATGTGCCCATGGCAGGAGTAACTGCCCCATACTACAGTAACTTTACACACAACCAGTACAGCGCCCCCTACCTGCAGGCAGAGATCCATAACAACAGCTTCTCAGATCTGGGCAACCTGACCGCAAGCTGTAACGTTGGCTGTCACTGTGTTAAGGAGTTGTTTAACCCCGTGTGTGGTGCGGATGGAGTCATGTACTTCTCTCCCTGCCATGCTGGCTGTAGCTCTCTCAACCACACATACAGCCTCAGAGGCAGACAGGTGTTCTCTGGATGCAGCTGTGTGGTAGGGAATATAACATGGGGAGAACGAGGGTTTGCTGAAGAAGGAAGGTGTGTGTCGTCCTGCAATCACATGCCAGCCTTCCTCACCTTCCTCTTCGTCATCATCTTCTTCACTTTCCTCTGCAGCATCCCTGCTCTTACTGCCACACTCAGGTGTGTTCCTGACAGTCAGAGGTCGTTTGGACTAGGGATCCAGTGGATTGTCGTCAGGACTCTCGGTGGGATCCCAGGCCCTATAGCGTTTGGCTCTGTGATTGACATCTCCTGCCTGTTGTGGGAGGAGCAGTGTGGGGAATACGGCTCCTGTTACCTGTACCACAACTCAGCCATGAGCCAGTACTCGCTCATCGCAGGCATCATCTACAAGGTTTTAGGCACCAGTTTCTTTTTTCTGGCCACCATGCTGTACAAGCCGCCCCCCGAGTCTCCTCAGAGCAGCTGTGAGAGCACGGATGTGGGAGGCGGAGACGCCAGAGACCTGCCAATCAAAGACCTCCCCGCTGAGATCATCTCCAACCCCCACGCCAAATTATGACCTCAGTCTACGAATACACAGACACCTCACCTCAAAGCGTGTGTGCACACATCTGTGTCTCTCTgtatgtgcgtgtttgtgtgtatatatatatatatatatattatatatatatatatatatatatatataaggtcaACAAAATCACTGTTCCCGTCCTGCGGCAGTACTTCATTTCCCAACATGCATTTGTGATTTGTTCCCATATACTCTCATTGGCCCACCGGTCTCAGAGTACAACGTCCAGTACATGAGCACTACAagtatattacataaacagaaCCTAAAACCAAAAGACGACATAATCTCAATTTGACAGAAGATTGTTTATGCGTATAAactgatattatttatataatttaaatgtcaaattacagcatttttgtAAGGAAAAAGCCAtagatgataaaaaaagagcacttaatataaatgtaatggaAAGAGAGTAATATACTGTGTAGATGTTATAAAAGTGTGAagctgttataaaatattaaagatagTTGATTCAAATGCTGCTCCGTTATACAAAAAAACCTGAcaattaattacaaactgtGCCTTTAAAAAGAGTTTTGCATAAGTCAGCACAGTAAGAAAGAGATTAGAGAAAAATGTCAATTGAAATCTCACAAACTCTTAAATCTCTCTAAATTGCACTTTAAACTCACTTCACTGATGGAGATGAACACGTGAACCAAGATTCATCCGACAACACAACATTACACAGTTTTCGCCCACATTCTGATATCATCTGAAGCATGTATGACTTGCGATTCATGTATTTGATTTTCATAAATTCTgaatatttgttacattttaaaatgtgccaaAATACTGTAGCTCAGGACTGAGCAGGACAGAGAGCCTTCTGTAAGGTCACAGAGATCAAGAGGCAGCAGGTTTACAAACTTTTTGCAACTGTGTATCAGGTTGAAAATACCACCCAAAATGGGATCTTCTTAAAAAGCACTTCACTTTGAGATTACACTTACAATTATTCTTGCACTGATTTTCAATCACATTTAGGATGGtatattgtaaaacaaaaaaaaaaaaagatactttcTCCCTTGCTCataaaatgcagcatttgtattttttaatttttaatttttttatgtagcaggatttttttttttttcgaacataaaaaaaataccccAAGCTGCTTAATTCCAAATATAAGAAGAATAACAAATATCTTTCACATGAACCTAATTTGCTTATATTAAGTGCTACTAAAACATCTCACCAATGATATTTTATGTAGAagattttacttattatttcatgcatttgttaGGATTAATTTTCCAAATGTTGTATCAGagctcttattattattattattattattattattattatattttttctttccctgATGTGATGGATTTTGATGGATTAAATCAACTCTCTGATGACGAACCCTGAATGACAATGATGCACTCGGAAATGGAAGATTTGCACAATGAAACTGAACATGCAACAACAAAGAGTAACGTGATGTTTGTATTTGAATTTGTGTTGGTTCATGTGTATTTTTTACTTCGATGACTGAAAGAAACGTGTCTTGTGTCACAAAAGGA
>XM_043224026.1
TCAGAAAAGAAAACCAGGGATTGCAGCGGCATAGATGCCTTAGTTCCTTCGTTTTTATGACAGTGCCGGTTTGGGgattttcattttgcttttgttgttcGTTCTTTGTACTGTTCTCTTTAAACTGTAAGATTTCTTAACTGACTGAAAGAAAACAGTGATAACACCTATTTTGATGTTTGCCTTCACGACATGATTTATATAAAGAGCTTGTGCATTTATCACAAATAAGTATGAATACTTAACTTTCATGcagttatataatttttattgcttattaaaaatgtaagacaAAAATTATCTGTAGTATTCATGCAGTGTGGATGGTGGGTGATGGGTTAAGAAGACTTCTGAGGTGCTTCTTATCAGGTAGATAGAGTGGGCAGGACTGTGCTGCTTCAGTGATAGATGTGAAGGAATGAAAGTCTGGGGTAACTCCCTATTTTGGGACTGTCTTGCTTGCTTCTAGTCTCTTATGCTGCTTGTTTTCGCTCTGATTTGTTGCACAATCAAACTCTCAGACCCTTTTAGACCAATGAAGTATTTGAGGAACCGAGAACTTTGTTTTCCAAAATCTGTATGACTTCAGTTTAAACTGTGAGAAACTCCAAGGGATCCTTTTTCCAAAAGACTGCCATCGCATCACTCTGCAAAACTACACACAGAATCAGTGTTTTCGATAGAAACGTTTAGATTTTTTACCCTTCACAAAGTCTGTCACAGTGCCCCCTGCTGGGGCCATGCCCCACCTGCTGAACAATGACACTTCCTTCAGCTCCAAGCAAGAGCTCTTGGTCCTACATGACAGTCCACTGGGACCCAGCCTGGACACTCCCAGCCCAGTGGAGTCCCAGGGCTCTGGTCCAAGCAGCCCAACTGGAGATGCCCACACTGTGCTCCACAAGACAGGCTTGTGCTCCACAAAGGGGCTTGACCTCACAGAGCCACCCACTGGGGTGAAGTTTGTTCCGACAGACTCAGAGAATCTTTGTGGATGGGGAGCACTGACCCCACAGTGTATCCAGACCTTCAACACTCCGCGCTGGGTTCTCTTCTTCCTCTGTGTGGCCTCCTTCCTTCAGGGCATGATCATCAACGGCTTCATCAACACCGTTATCACCTCCATCGAAAGACGTTTTGATCTGCGCAGCTACCAGGCGGGACTCATCGCAAGCTCCTATGACATTGCTGCTTGTGTGTGCCTGACATTCGTGAGCTACTTTGGTGGTACTGGTCACAAGCCTCGATGGCTGGGCTGGGGTGTACTCATCATGGCACTGGGCTCTCTGGTCTTTGCTCTGCCCCATTTCACCACACCACCCTATGAGGTGAGAGTCCCAGAGCGCATGGGGCTGTGCTCAGCCAATCACACCGAGACGTGTGTCGGTGAAGAAGGTGGGCTCTCGGCGTACCGTTACGTCTTTATGCTGGGCCAGTTTCTGCACGGGGTTGGAGCAACCCCTTTGTACACCCTCGGGGTCACCTACCTAGATGAGAATGTCAAGTCAAACTACGCACCTGTATATATAGGGATCTTCTACACGGCTGCCATTGTAGGGCCTGCTGCTGGATACTTGCTGGGTGGATTCTTTCTCAACATCTACACAGAAATCGACCAAACgaCAGAGTTGACCCCTGAAAACCCGCTGTGGGTGGGAGCTTGGTGGATTGGTTTCCTGGCAGGAGGTGCAGCAGCTCTGGTTATCGCTCTGCCTATACTGGGTTACCCACGACAGCTACCAGGCTCTCAGCGGTATGTGGCCATGCGGGTCTCAGAGGCCCACCAGCTGAAGGATGGCAGTCAGATCACTGCGGCTGATCCTCAGTTTGGCAAAACAGTAAAAGACATGCCCAGGTCAATGCTGCTTCTTTTAAAGAACCCTACCTTCATCTTCCTGTGTCTCGCTGGTGCCACAGAGGCCACGCTCATAGCTGGAATGTCCACGTTTGGCCCCAAATTTCTAGAGTCTCAGTTTAGTCTGAGTGCTTCAGAGGCAGCAACCTGGTTTGGTTATATGGTGGTACCAGCAGGTGGAGGAGGCACCTTTCTCGGTGGCTTCATTGTAAAGAAGCTGAACCTTCGCTGCCGTGGGATTATTCGTTTCTGTATGCTGTGCGCAGTGGTCAGTCTGTCGGCTATCTTCATATTTTTGGTACACTGTCCTAATGTGCCCATGGCAGGAGTAACTGCCCCATACTACAGTAACTTTACACACAACCAGTACAGCGCCCCCTACCTGCAGGCAGAGATCCATAACAACAGCTTCTCAGATCTGGGCAACCTGACCGCAAGCTGTAACGTTGGCTGTCACTGTGTTAAGGAGTTGTTTAACCCCGTGTGTGGTGCGGATGGAGTCATGTACTTCTCTCCCTGCCATGCTGGCTGTAGCTCTCTCAACCACACATACAGCCTCAGAGGCAGACAGGTGTTCTCTGGATGCAGCTGTGTGGTAGGGAATATAACATGGGGAGAACGAGGGTTTGCTGAAGAAGGAAGGTGTGTGTCGTCCTGCAATCACATGCCAGCCTTCCTCACCTTCCTCTTCGTCATCATCTTCTTCACTTTCCTCTGCAGCATCCCTGCTCTTACTGCCACACTCAGGTGTGTTCCTGACAGTCAGAGGTCGTTTGGACTAGGGATCCAGTGGATTGTCGTCAGGACTCTCGGTGGGATCCCAGGCCCTATAGCGTTTGGCTCTGTGATTGACATCTCCTGCCTGTTGTGGGAGGAGCAGTGTGGGGAATACGGCTCCTGTTACCTGTACCACAACTCAGCCATGAGCCAGTACTCGCTCATCGCAGGCATCATCTACAAGGTTTTAGGCACCAGTTTCTTTTTTCTGGCCACCATGCTGTACAAGCCGCCCCCCGAGTCTCCTCAGAGCAGCTGTGAGAGCACGGATGTGGGAGGCGGAGACGCCAGAGACCTGCCAATCAAAGACCTCCCCGCTGAGATCATCTCCAACCCCCACGCCAAATTATGACCTCAGTCTACGAATACACAGACACCTCACCTCAAAGCGTGTGTGCACACATCTGTGTCTCTCTgtatgtgcgtgtttgtgtgtatatatatatatatatatattatatatatatatatatatatatatataaggtcaACAAAATCACTGTTCCCGTCCTGCGGCAGTACTTCATTTCCCAACATGCATTTGTGATTTGTTCCCATATACTCTCATTGGCCCACCGGTCTCAGAGTACAACGTCCAGTACATGAGCACTACAagtatattacataaacagaaCCTAAAACCAAAAGACGACATAATCTCAATTTGACAGAAGATTGTTTATGCGTATAAactgatattatttatataatttaaatgtcaaattacagcatttttgtAAGGAAAAAGCCAtagatgataaaaaaagagcacttaatataaatgtaatggaAAGAGAGTAATATACTGTGTAGATGTTATAAAAGTGTGAagctgttataaaatattaaagatagTTGATTCAAATGCTGCTCCGTTATACAAAAAAACCTGAcaattaattacaaactgtGCCTTTAAAAAGAGTTTTGCATAAGTCAGCACAGTAAGAAAGAGATTAGAGAAAAATGTCAATTGAAATCTCACAAACTCTTAAATCTCTCTAAATTGCACTTTAAACTCACTTCACTGATGGAGATGAACACGTGAACCAAGATTCATCCGACAACACAACATTACACAGTTTTCGCCCACATTCTGATATCATCTGAAGCATGTATGACTTGCGATTCATGTATTTGATTTTCATAAATTCTgaatatttgttacattttaaaatgtgccaaAATACTGTAGCTCAGGACTGAGCAGGACAGAGAGCCTTCTGTAAGGTCACAGAGATCAAGAGGCAGCAGGTTTACAAACTTTTTGCAACTGTGTATCAGGTTGAAAATACCACCCAAAATGGGATCTTCTTAAAAAGCACTTCACTTTGAGATTACACTTACAATTATTCTTGCACTGATTTTCAATCACATTTAGGATGGtatattgtaaaacaaaaaaaaaaaaagatactttcTCCCTTGCTCataaaatgcagcatttgtattttttaatttttaatttttttatgtagcaggatttttttttttttcgaacataaaaaaaataccccAAGCTGCTTAATTCCAAATATAAGAAGAATAACAAATATCTTTCACATGAACCTAATTTGCTTATATTAAGTGCTACTAAAACATCTCACCAATGATATTTTATGTAGAagattttacttattatttcatgcatttgttaGGATTAATTTTCCAAATGTTGTATCAGagctcttattattattattattattattattattattatattttttctttccctgATGTGATGGATTTTGATGGATTAAATCAACTCTCTGATGACGAACCCTGAATGACAATGATGCACTCGGAAATGGAAGATTTGCACAATGAAACTGAACATGCAACAACAAAGAGTAACGTGATGTTTGTATTTGAATTTGTGTTGGTTCATGTGTATTTTTTACTTCGATGACTGAAAGAAACGTGTCTTGTGTCACAAAAGGA

Function

symbol description
slco4a1 Predicted to enable sodium-independent organic anion transmembrane transporter activity. Predicted to be involved in sodium-independent organic anion transport. Predicted to act upstream of or within ion transport and transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human SLCO4A1 (solute carrier organic anion transporter family member 4A1).

NR:

description
PREDICTED: solute carrier organic anion transporter family member 4A1

GO: NA

KEGG:

id description
K14354 SLCO4A; solute carrier organic anion transporter family, member 4A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224025.1 False 4207 mRNA 0.45 12 8114941 8132951
XM_043224026.1 True 4576 mRNA 0.44 12 8120226 8132951

Neighbor

gene id symbol gene type direction distance location
plagl2 plagl2,LOC107690855,LOC107559482,LOC107707758,LOC107681868,LOC107747490,LOC107558237 coding upstream 194900 7884296 ~ 7920041 (+)
LOC122328711 LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 coding upstream 293148 7815091 ~ 7821793 (+)
LOC122328639 LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 coding upstream 340969 7766223 ~ 7773972 (+)
myt1b myt1b,LOC107690850,LOC107747484,LOC107681384,LOC107559484,LOC107558231 coding upstream 349889 7684304 ~ 7765052 (+)
oprl1 oprl1,LOC107727003,LOC107681404,LOC107666560,LOC107705672,LOC106572940 coding upstream 627405 7459498 ~ 7487536 (+)
ntsr1 ntsr1,LOC107559468,LOC107747990,LOC107707740,LOC107671946,LOC107657007,LOC107603109 coding downstream 23242 8156193 ~ 8175519 (+)
LOC122329211 ccdc178,LOC107555255,LOC107667113,LOC107599731 coding downstream 148275 8281226 ~ 8307764 (+)
LOC122328648 abcd4,LOC107667197,LOC107677172 coding downstream 202003 8334954 ~ 8341779 (+)
LOC122329212 LOC107732057,LOC107718040,LOC107555247,LOC107677163,LOC107599733,LOC107667194 coding downstream 218849 8351800 ~ 8353910 (+)
pex14 pex14,LOC107681981,LOC107708844,LOC107716227,LOC107586529,LOC107695784 coding downstream 496253 8629204 ~ 8689833 (+)
LOC122328539 NA non-coding upstream 38621 8054337 ~ 8076320 (+)
G155704 NA non-coding upstream 77678 8036903 ~ 8037263 (+)
G155701 gata5,LOC107681871,LOC107603108,LOC107559469,LOC107747495,LOC107707745 non-coding upstream 129355 7984095 ~ 7985586 (+)
G155660 NA non-coding upstream 175185 7938606 ~ 7939756 (+)
G155655 tm9sf4,LOC107681873 non-coding upstream 182885 7929733 ~ 7932056 (+)
G155756 LOC107563058 non-coding downstream 275215 8408166 ~ 8410045 (+)
G155813 NA non-coding downstream 480463 8613414 ~ 8617005 (+)
G155823 NA non-coding downstream 491179 8624130 ~ 8624789 (+)
G155824 NA non-coding downstream 491954 8624905 ~ 8625636 (+)
G155829 NA non-coding downstream 495842 8628793 ~ 8629065 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other upstream 809407 7298360 ~ 7305534 (+)
G155561 NA other upstream 876022 7225994 ~ 7238919 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other upstream 1516409 6592602 ~ 6598532 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other upstream 3279457 4817365 ~ 4835484 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 4417919 3694652 ~ 3697022 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 188754 8321705 ~ 8333376 (+)
G155799 NA other downstream 355135 8488086 ~ 8488641 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other downstream 808080 8941031 ~ 9101372 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other downstream 987933 9120884 ~ 9122393 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other downstream 1550795 9683746 ~ 9769620 (+)

Expression


Co-expression Network