slc25a33 (slc25a33,LOC107708828,LOC107695765,LOC107681985)


Basic Information

Item Value
gene id slc25a33
gene name slc25a33,LOC107708828,LOC107695765,LOC107681985
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9135415 ~ 9142320 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224052.1
TCCGGGTTTAAAGCTAGAGAAGCCGGTTAGCGAGCATCATCGGGCCGTCGGCCTAAGCGACTgcgttctgtttttatttcaagtctAACGGTTTTGCGAGGTGCGATGGCTCTTTGAAATGGCGCAGAAAGACACGCTGTTACATCTCTTCGCTGGGGGATGTGGTGGAACCGTAGGTGCCATCATGACCTGCCCCCTGGAGGTGTTAAAAACCAGACTACAGTCATCCGGTCTCACCCTCAGGCCTGTTTTCCAGGTCCAACTGGGCACATTCAACGGTGCTGGCGTCATTCGACCGGGACCCGTCAGCCCTAGCTTGCTACAGGTGTTACGGTCAATTCTAGAGAAAGAGGGACCAAAATCTCTATTCAGAGGATTGGGCCCAAATCTAGTTGGTGTTGCACCCTCAAGGGCGATCTATTTTGCAGCTTATTCAAAGTCGAAAGAGACTTTCAATGGAATCTTTGTCCCAAACAGTGGAATTGTCCACATGTCCTCGGCTGGCTTTGCAGcaTTCGTCACAAACTCCCTGATGAATCCCATCTGGATGGTCAAAACAAGAATGCAGCTTGAGAGGAAGGCACGTGGGGAGAAGAAAATGAATGCGTTACAATGTGCGCGGTACGTGTATAAAACGGAAGGTATGCGAGGTTTTTACCGGGGCCTGACCGCGTCGTATGCTGGCATCTCGGAGACCATGATCTGCTTCCTCATTTACGAGACGCTGAAGAAGTACCTAGCGCAGAGTCGATTCACCACGcctgacacagacacagaaaagGGCGCTTCAGATTTCCTGGGCCTCATGGTTGCTGCTGCATTTGCCAAGGGTTGCGCCTCCTGCATAGCTTATCCACATGAGGTCATTCGGACACGACTAAGAGAAGAAGGAAGCAAATACAAGTACTTCTTTCAGACGGCGCGCCTTGTGGCGGTGGAAGAGGGATACGCAGCTTTTTACAGAGGACTCATTCCACAGCTCATCAGACAGATCCCCAACACAGCCATAGTGCTGTCCACCTATGAGCTCATTGTCCATCTGTTGGGTGAACCCTCCAAATGAAGCTGAACACTACAAGCACAAAGATACTTTTGACCTGCAGCTAAAGTGGACAGAAAAGAATCCATTGTGAACAGGgatgtttatttgaattacCCAAAGACATTAaacggcttttttttttttttattattattttgcgtTGACTGCATATGCTATCAGAACTGTTTTGCTTGTTTATGTGTTATGTAAATGGCGCATATTGCATAGCTACTCCTAGATGTTTGTGTATACTGTATCAGTGTACAGCAAAAAGTCATCCGAATATACAAATAGTGCTTTAAGTTAACTAAATTATTCCTATTATAAGTAGCAGcattgggttgtttttttttttttttcagtctgttgAACTCTACGGTACGGTACTTGTCCAGGAGTTTTGGAGTTAATCATTATTGGATCCGGGTTTTATTATGAAGTTCTTGGAAGGAATTCAAATGATACTGTAATGGGGGCGTAGAATACGCTATTAGCTGATAAGCTCACGTTGCaatattttgtaacactttCCTGCTTCATGACAACTAGTAGCACTGGAATCTGACCAATCAATTCCATTCACCTCTTCACTAGAAACCTATAATCTGTTTACTGTATGTTAAGTTGTTCATCTTTTGCAGAAAATGAGGGCCTTGATGCATATGCTGCTGttggtttaataaaataaattatggaagttattttttttgttgttggaaaTGCACAGAAATAATGAGCCACATTAATAAATAGACCTTTTCAAGCCTG

Function

symbol description
slc25a33 Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in margin; myotome; and pharyngeal arch 3-7 skeleton. Orthologous to human SLC25A33 (solute carrier family 25 member 33).

NR:

description
PREDICTED: solute carrier family 25 member 33

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15116 SLC25A33_36, RIM2; solute carrier family 25, member 33/36

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224052.1 True 1810 mRNA 0.44 7 9135415 9142320

Neighbor

gene id symbol gene type direction distance location
tmem201 tmem201,LOC107681977,LOC107695766,LOC107718817 coding downstream 156 9124000 ~ 9135259 (-)
foxl2l zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 coding downstream 12684 9120872 ~ 9122731 (-)
pik3cd pik3cd,LOC107708832,LOC107718809,LOC107681979,LOC107695767 coding downstream 17343 9099273 ~ 9118072 (-)
clstn1 clstn1,LOC107718806,LOC107681971 coding downstream 72514 9029720 ~ 9062901 (-)
nmnat1 nmnat1 coding downstream 108985 9023008 ~ 9026430 (-)
camta1a camta1a,LOC107708820,LOC107570946,LOC107656552 coding upstream 73465 9215785 ~ 9516716 (-)
thap3 LOC107656551,LOC107708819,LOC107570956 coding upstream 384272 9526592 ~ 9528135 (-)
pcmtd2a pcmtd2,LOC107708816,LOC107570992,LOC107701717,LOC107756374,LOC107656550,LOC108433859 coding upstream 401166 9543486 ~ 9548342 (-)
myt1a myt1a,LOC107756375,LOC107708774,LOC107586511,LOC107571600,LOC107701718 coding upstream 406804 9549124 ~ 9562123 (-)
LOC122328677 LOC107656548,LOC107756378,LOC107708812,LOC107571042 coding upstream 473213 9615533 ~ 9621872 (-)
LOC122329247 NA non-coding downstream 62471 9070384 ~ 9072944 (-)
G155933 NA non-coding downstream 506312 8628699 ~ 8629103 (-)
G155825 NA non-coding downstream 509773 8624926 ~ 8625642 (-)
G155803 NA non-coding downstream 602488 8526402 ~ 8532927 (-)
G155759 NA non-coding downstream 752808 8307279 ~ 8382607 (-)
G155968 NA non-coding upstream 10760 9153080 ~ 9153502 (-)
G155979 NA non-coding upstream 46193 9188513 ~ 9188897 (-)
G156051 LOC107708813,LOC107656547,LOC107571009,LOC107756377 non-coding upstream 459642 9601962 ~ 9602477 (-)
G156054 NA non-coding upstream 465168 9607488 ~ 9607948 (-)
G156056 NA non-coding upstream 469930 9612250 ~ 9612596 (-)
ctnnbip1 ctnnbip1 other downstream 38113 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 208664 8921564 ~ 8926751 (-)
c23h1orf127 LOC107708840,LOC107570680 other downstream 215645 8913062 ~ 8919770 (-)
G155827 NA other downstream 507024 8625758 ~ 8628391 (-)
G155807 NA other downstream 583438 8545394 ~ 8551977 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other upstream 52990 9195310 ~ 9209964 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other upstream 659465 9801785 ~ 9808369 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other upstream 689489 9831809 ~ 9833682 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other upstream 1076153 10218473 ~ 10385967 (-)
LOC122329224 NA other upstream 1213621 10355941 ~ 10359786 (-)

Expression


Co-expression Network