mfsd4ab (mfsd4b,LOC107737687,LOC107671943,LOC107560864,LOC107741314,LOC107563649,LOC107656990)


Basic Information

Item Value
gene id mfsd4ab
gene name mfsd4b,LOC107737687,LOC107671943,LOC107560864,LOC107741314,LOC107563649,LOC107656990
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11141479 ~ 11147587 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224114.1
CGGGAAATTATCATCTATTCTGCGATCTGTCATCTAAGCAAATAATCTGAAAcccaaagaaagaaacattcagaCCAAGAGCTACAGCTGTGAGTGGAAAAGGTCGGAGACTTTTAACGCTATGTTAATAGAGGAGCGTATATTAACACTTTTCAGAAGGAACTGTCAACATACACTGACATACTGGAGTGTGTTCTTCAGCTTTGGACTGAGCATAGCCTTTCTGGGGCCTACGATCCTAGATCTGAAATGCCAGACTGGCTCCACGTTACAGGAGATCACCTGGGTGTTCTTCTCCCAGCAGTTGTGCCTGCTCATCGGCAGCTCGATCGGAGGTGTTTTCACCAAAACGTTGTTCTGGGCCCTCGCCGCTCTCTTGTTCTCCTCCCTCATCATCTCTGTGGTTCTTGCTATCCTCCCACTTTGCTATAATGTGCTGTTGCTGGCGGTTGCTATGGCAGTGTCAGGCCTGGCGATGGGCATCATCGATACTATTGCAAACATCCAACTGGTGTCCATTTATAAGAAAGACTCTGCTATCTTTCTGCAGGCACTGCACTTCTTCATTGGGCTCGGTGCTCTGGTGAGCCCCCTGATTGCAGACCCTTTCATATCAGAGCACTGCCTGGGCAGTAATAGCACAGAAAATGCCACAGAGATAATTCAGCACTTCAGATCCAGCTTCAGGTCACCAGTATTCCTCGCTGAGGATTCCCCACACTCAGAGCCGGTTGGGGAGAAGGCCTACGTGGCGTACGCCTTCTGGATCATGGCTCTCATTAACTTGCCTGTGCCGATTGCGGTTTTTGTGCTGATGTACCAAGAGAAGCTGCTCCCATTCTGCCCAAATAGCACACCACGACTGCTGGACAAAGATGAGCTGGCCATGGAGACTAAAGCACCAGAAGACACAGAGATATCTGAACCAGATGATGCAGGTTTCCATCATGGAGAACATGGAAACATCTTCAGCTGCTGTATGAATGGTAGCCTGCGTGGGTTACCGGTCACGTTTTTTGGCATCCACATCTTGGGCGGTTTGGTCCTGTTCATGACGGAAGGCATTATGGGGGTCTACGCCGGCTTTGTTTACACGTACGCTGTTTCAGCTCCCATGTCTCTGCACGCTAAAATGGCAGGATACCTGAACTGTATCTTCTGGGCAGCTGTCACTGCTGGACGACTGGTCTCCATCCCGCTGTCATACCGATTCAGATCTGTGCATCTGCTCGTCATCAACCTGgcTGGTGTGATTGTAACATTGGTGCTTTTATTGATCCTCTACACAAACAGAGTTTTTCTGTTTGTGGGGACGACTTTGCTCGGGCTTTTCATAAGCAGTGTTTTCCCCTGCATAGTGGCCTACACTGAGGACATCCTGGAGTACCGCGgaTGTGCCACATCAGTGTTAGTGACAACTGCTGGAATGGGTGAGATGACGTTGCAGGTGTTGGTTGGATCACTAATTCAGAAAAAAGGCACTTACAGTTTTTTGGTGTGCGGTTTGGTCATCGGATGCCTCAGTTTCATCTTCTTCCTCAGCGTGATCCTGTGCAACCACATCCACAGAAATCTCACAGGAGCATCTAAAAAAGCAGCCCTCGAGGAAGCACCACCAGCTCCTGCTCCACATGCTTCAGAGAAAGCAGCTCCAGAACCGAAAGTTGCTGTAATACAAACTGAATCGATGAAATGTGACTCTGGATGAGACTATTCATGGGTCATAACCTTCTTAAATTACTTTACAATGCAACTGTACAGTCAGTGAGCTTTCATTATCATATCTGtgtaaaaaccaaacaaacaaaaccaaacaataacACCAGAAACTTTatgcaatatgtttttttatgtacttctgTTAAGTTTGGTACTGGTATATATGtatctctttgtttatttgatgcTCAGTTTCTCACAGATTATCTtaacttaaattattattgttggaacagaaaacaaatgtgagaaatgtttaattacaggAGGTGAATAAAGTTATTCATAGCATAAAATGTATAAGGTTTTGTACTTTACCCAAGACTGaagatcataaacactaaataaaataccagattaaactgttatttaataattca

Function

symbol description
mfsd4b Predicted to enable glucose transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transport; sodium ion transport; and transmembrane transport. Predicted to be located in apical plasma membrane. Predicted to be integral component of membrane. Orthologous to human MFSD4B (major facilitator superfamily domain containing 4B).

NR:

description
major facilitator superfamily domain-containing protein 4A

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224114.1 True 2099 mRNA 0.45 10 11141479 11147587

Neighbor

gene id symbol gene type direction distance location
LOC122329135 LOC107737653,LOC107671959 coding upstream 36304 11100072 ~ 11105175 (+)
nfascb nfascb,LOC107672057,LOC107737654,LOC107741310,LOC107657041,LOC107560902 coding upstream 42937 11085866 ~ 11098542 (+)
naca naca,LOC107737655,LOC107671995,LOC107657042,LOC107563656 coding upstream 65548 11068486 ~ 11075931 (+)
LOC122329335 NA coding upstream 65742 11075662 ~ 11075737 (+)
LOC122329336 NA coding upstream 66313 11075091 ~ 11075166 (+)
LOC122329179 uba3,LOC107737645,LOC107672020,LOC108435248 coding downstream 8235 11155822 ~ 11161895 (+)
LOC122329091 LOC107560879,LOC107741317,LOC107657035,LOC107671941,LOC108436304 coding downstream 17055 11164642 ~ 11168458 (+)
LOC122328405 idh3g,LOC107671940,LOC108436344,LOC107560866,LOC108275983,LOC108276129,LOC108425561,LOC107593912,LOC107716150 coding downstream 115811 11263398 ~ 11268541 (+)
avpr2ab avpr2ab,LOC107672000,LOC107737642,LOC107657032,LOC107562472,LOC107741337 coding downstream 137744 11285331 ~ 11301933 (+)
myh7bb myh7bb,myh7b,LOC107672010,LOC107737633,LOC107657025,LOC107741323,LOC107562469 coding downstream 214295 11361882 ~ 11378016 (+)
G156572 NA non-coding upstream 14845 11124092 ~ 11126634 (+)
G156551 NA non-coding upstream 105984 11033791 ~ 11035495 (+)
G156496 NA non-coding upstream 239656 10829167 ~ 10901823 (+)
G156432 NA non-coding upstream 413249 10727933 ~ 10728230 (+)
G156431 NA non-coding upstream 414315 10726918 ~ 10727164 (+)
G156568 NA non-coding downstream 1276 11148863 ~ 11152047 (+)
G156590 NA non-coding downstream 63454 11211041 ~ 11243036 (+)
G156592 NA non-coding downstream 71448 11219035 ~ 11313603 (+)
G156599 NA non-coding downstream 97964 11245551 ~ 11311487 (+)
G156633 NA non-coding downstream 184155 11331742 ~ 11332927 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 55875 11077154 ~ 11085604 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 217491 10913904 ~ 10923988 (+)
G156414 LOC107707743,LOC107747988,LOC107671949,LOC107559475 other upstream 440584 10698798 ~ 10700895 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other upstream 569233 10563344 ~ 10572246 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 586759 10551097 ~ 10554720 (+)
G156586 NA other downstream 26834 11174421 ~ 11177033 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other downstream 549827 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other downstream 583393 11730980 ~ 11732361 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other downstream 1098606 12246193 ~ 12251982 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 2946491 14094078 ~ 14126201 (+)

Expression


Co-expression Network