trim35-39


Basic Information

Item Value
gene id trim35-39
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4517836 ~ 4521780 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224118.1
TAAAACTCCCCGACTGACTGAAGAGGAGATCTCATGGCATCGGTCGTGAAAACGTTGGACAGCGCCCGAGGTTCGATCTCCGGTCGCACGGTTTCCCGGCGGCCATGAGATGGTGATTTTTCAGTCAATCGGAAGTAACCACTGAGCCAAACCAACGTGAAAGCGGAGGGATCAGAAACCTGCTTTAACTGTAGGGACCTATCGTGCGCATGCGCGCTTCAGCTGTGAATAAACACTTTTTCCATGAGTTATTTTAACACTGCAACATATAAACTTTTAAGTCATCAACAGATTCTTAAATGCACCTAAAGTGAGCTGTTCGTCTTATGCACTAATAGGCCATGAGCAATGccaataatgtaaataactgtttttccAACATTGTCAAGCAAAAGGCTGTAGAATGATAGCGAAAGCAACAAGGCCATCAGAAGTATTCTGGCTGGCTGCATTAAtgatatttaacaattattaataatattatttgcaCGGTTGCATGTTTTACGTTTCATTCTGACGTTTTGAGCTCGCTGTGGTAAAGTTGCGCGTGAAAGACGTGTGGCTGGCtgtcagggttgccaggttttctcAGCAAAACGCAACTTAAAACCAGCCCAATCGCTTTTCAGGGGGATTCAACGGAAATAACGCGGTGATATTTTTTGGCTGATAAACGTTTCGTCCCAGGGCCAGGGGTTTAATACCATGTTACTGAGGTCGCTCCGTCCCGCGGAAAGAGCGGTAAAGACCCCAAGTCCGCGGGAAAACCGTGGACATGGCAACACTTGAGCCTGTCACGGGCCGTGACGTAGGTGAAACTCCACGTGTCGGGCTTGTTTTTAACACTAGGTGGTAAGAAACACCCTTTTAGTGTACACCCTCTTTCAAAGCTTGCACAGACTTGactgtctttgtctttttcctCAAAGTCTCTAAACGTGCACAGACTCGAATGACAGCAGCGCCTGTGTGATTCTTGTGCTACTTTAGGAAAACGTCGAGAAATAAACCGCGTTAACTGGCGCTCCCAAACACTAAAATGGATTCATTCTTCGCGAATGACATTTCCTGTCCGATTTGCTGTGAAATCTTCAAGTCCCCAGTTCTTCTGTCGTGCAGCCACAGTTTCTGCGACGAGTGTCTTCGCCGGTTCTGGAGGACCAAGAAGACTAGAGAGTGTCCCGTCTGCAGGAGAAGATCCTCAAGAGACGCTCCCCCGTCTAATCTCGTCTTGAAAAACTTGTGCGAGTCATTCCTGAAGGAGAGGAGAGATAAGAGGCGTCTATCTGGGTCCGAGGAGGCCTGCGGCTCACACGGGGAGAGGCTCAAGCTATTCTGTCTGGAGGACAAACAGCCGGTGTGCTTAGTGTGCAGAGATTCACAGAAACACATCCATCACACATTCAGACCCATCAGTGAAGTAGTTGAATCTCGTAAGGAGGAGCTGAAGTCCTTACAAGAGAAACTTAAGTGcagtgaaaaatgtaaagaagaTTGTGTGAAAATACTTCAACACATTCGGTCTCAGGTGGAGCACACGGAGTGTCGGATTAAACTGGAGTTTGAGAAGCTTCATCAGTTTCTCAGAGAGGAAGAACGGATTGCAATCCGTGTGTtgagggaggaagaggagcagaagACTCAGATGATGCAGGCGAAGTTTGCGGAGATCAACGCACGCATCTCGGCTCTTTCACGCACAATCGGAGACTTGGAGAAGATGTTGAACACCAATGAAGTCTTTTTTCTAAAGAGCTTTCCGGACGTGATGGAAACCTTACCAGATTCACAGCTGGCTTCTGGAGCTTTGATTAATGTGGCACGTTACCTGGGCAACCTGAGCTTCAGAGCCTGGAAGAAGATGCAAGACGTTGTTCAAAACACTCCTGTGAttctggatccaaacacagctcATCCAGATCTCCTCTTGTCTGATGATCTGACAGAGGTCCAGCAGTTGACACTTCCTGCTAATCCCGAGAAACATTGTTGCGTTCTGGGTTCAGAGGGATTTGACTCGGGAACACACCGCTGGGATGTAGAGGTCAAAGAGAGCTCGTCCTGGAGTCTAGGAATAACTACGGCATCAAACCCGAGGAAGGGATACGATTTTTTTGACAGTGGTGTGTGGAGTGTGCAGCACAGACTGTTTGAAGAGTCAGGTCTTCCTGTCGTACAGCAGCTGGAGCGGGTGAGGGTTCAGCTGGACTGTGACAGAGGAACAGTGTCGTTCTCTGACCCTGTATCTAACACCAATCTATACACGTTAACAACCACCTTCACTGAGACCGTCTTTCCATTCTTTTATAGCTTTTCTCATCTGAGGATCTTATAGTTGAAGGGTTTGTAGATTTGGTGCATTTGGCTCCTCAGAGGAACTAGATCATTGTTTTCACTGCCTTTCTAgcaatgtgtgtttatgtttgctggcatgtaattaaataaaggtCACAGTTG

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224118.1 True 2457 mRNA 0.47 8 4517836 4521780

Neighbor

gene id symbol gene type direction distance location
LOC122328988 LOC107697013,LOC107750890,LOC107601349,LOC101884738,LOC107705748 coding downstream 175197 4340087 ~ 4342639 (-)
ptges3b ptges3b,LOC107750889,LOC107601352,LOC107673275,LOC107697015,LOC107705749 coding downstream 180811 4330715 ~ 4337025 (-)
baz2a baz2a,LOC107697014,LOC107673266,LOC107705669,LOC107601319 coding downstream 189919 4303555 ~ 4327917 (-)
LOC122328525 LOC107696959,LOC107601327,LOC107565993,LOC107673245,LOC101885864,LOC103025508,LOC107750891 coding downstream 219242 4292233 ~ 4298594 (-)
mipb mipb,LOC107565996,LOC107705750 coding downstream 228367 4288270 ~ 4289469 (-)
si:ch211-117c9.2 LOC107750896,LOC107696933 coding upstream 146 4521926 ~ 4530336 (-)
edem2 edem2,LOC107697010 coding upstream 18522 4540302 ~ 4546406 (-)
prpf6 prpf6,LOC107705744,LOC107697009,LOC107673318 coding upstream 29249 4551029 ~ 4566274 (-)
naa10 naa10,LOC107705681,LOC107693544,LOC107723122,LOC107696956 coding upstream 290008 4811788 ~ 4815325 (-)
g6pd g6pd,LOC107723128,LOC107705737,LOC107693547,LOC107697003 coding upstream 294042 4815822 ~ 4827179 (-)
G154895 rbm38,LOC107565990,LOC107705751,LOC107673236,LOC107697017 non-coding downstream 173969 4283769 ~ 4343867 (-)
LOC122328378 NA non-coding downstream 315696 4200644 ~ 4202140 (-)
G154787 NA non-coding downstream 452307 4063965 ~ 4065529 (-)
G154789 NA non-coding downstream 452956 4063523 ~ 4064880 (-)
G154783 NA non-coding downstream 467256 4050290 ~ 4050580 (-)
G154933 NA non-coding upstream 25103 4546883 ~ 4550218 (-)
G155085 NA non-coding upstream 158203 4679983 ~ 4680279 (-)
G155092 NA non-coding upstream 185885 4707665 ~ 4710337 (-)
G155093 NA non-coding upstream 190909 4712689 ~ 4713082 (-)
G155096 NA non-coding upstream 206074 4727854 ~ 4731140 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other downstream 322838 4173914 ~ 4194998 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other downstream 611944 3894966 ~ 3905892 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other downstream 999694 3502265 ~ 3518142 (-)
LOC122328836 LOC107566068 other downstream 1071872 3434124 ~ 3445964 (-)
G154445 NA other downstream 1566208 2925305 ~ 2951628 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other upstream 305698 4827478 ~ 4834520 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other upstream 932637 5454417 ~ 5455047 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other upstream 956061 5477841 ~ 5479822 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other upstream 962432 5484212 ~ 5496474 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other upstream 2209071 6730851 ~ 6731886 (-)

Expression


Co-expression Network