zgc:103759 (zgc:103759,LOC107737722,LOC107562457,LOC107657028,LOC107741343)


Basic Information

Item Value
gene id zgc:103759
gene name zgc:103759,LOC107737722,LOC107562457,LOC107657028,LOC107741343
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11354880 ~ 11356679 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224132.1
ATAGTAAACGTCAGGTGATTACAGTAGCACGTTGTTGCTTGCAGCAGTAGCGTACACGCGCACCGTGTCTTTTGCTATTCCTTATTTAGCAGTACGCGTTATTAAATGTACAactgattcatttgtttatcGCTCGTGCTGTAATGGCGGAACAGATCACGAGAGAAGATGCGTTGACACGGGAGGGCTACAGACACGCGTGTCACGTTTTGCTGTACGGAGACTCTAGTGCCAAGCTCTTCGGGAAAATCCCAATCAAACATATAGTACTGATGCAGATGCGTTTTGATGGCTTGCTGGGTTTCCCAGGGGGATTGGTGAACCCGTCTGAGGAGACCCTGGAGGCGGGGCTTAGCAGAGAGCTCCACGAGGAGGTGGGCGTGGCTGTGCCTGTGGGCGTGGACAATCACGTGTCCTCCTGTCTTTCTCCATCCTGCTCTCGGCTCATCACGCACTTCTACATCAAGAAGATGACAGAGTCAGAGCTGAAAGAGTTAGAGCGAGCAGCCGTAGCTACAGCCGCAGACCACGGTTTAGAGGTATTAGGTATGGTCAGAGTACCCCTCTACTTCCTCAAGAATGGAGGTGGTCTTCCCTATTTCCTGTCCCACTCGTTCATCAGCGACTCTCGGGCCCAGCTGCTCTCTGCCCTGCAGCGCTGTGGGCTGCTGTCCCAGGGGGAGCTGGAGAAGGCTGTGAAACAGGCCGAGCAGATGAGACGCACACACAGCGGTGATCCACACTGACATCAGTTTACACAGCGGTGCCTTTTCACCCCTGGGCCACAGCTACATCACAGTAGCCCAACCCCCTCACTGCCTGTAGAAACTCCCTCCTGTCCTCATTCTACCTTGCTTTCCTGATTCAAGCATATACTGCATGTATTCTCTGTAGAGATCCTGTGACCTGTTTAACAGGGCCTTGGCTGTTAACCAAACATTTACTTGTGACTAGATTCACTTAATTGGGATTGTTATTGTTTGGTAGTGTCTTTATGTCCATATTCGGATATACCGTGGGATGTTGCAATAATTATACctcataatataattttttgttaatatgtaCTTATATAATTTGCACAtgcaaatgaataatatattatttctgaCGAGGCGCATAAGAGATTTATACGCCATACTGATTTTGAATTTATCAGATCTGTTCATGAGAGTAAAATATTGTGCATGCTGGTTGACTAATAAAAAGCAGAATGCTTATAAGGCTTATTTTTCGAAGATTTCTtgctaatttaaattaaagctaGGGTTTCAATCACAGAACACATGCAGTACTTAGAATTGCCACAGAGTTGTGCTACCAGACTTTTTTTACAAGCATGTCTGTATATTTGGCTGTGACTTTATAATGTCAGAGCCACttgatttaattataaaattgtattctaataatatttgacagaattgtaaaaataaagatttttttaatctac

Function

symbol description
zgc:103759 Predicted to enable several functions, including m7G(5')pppN diphosphatase activity; nucleotide phosphatase activity, acting on free nucleotides; and phosphodiesterase decapping endonuclease activity. Predicted to be involved in mRNA catabolic process and sno(s)RNA catabolic process. Predicted to be active in nucleus. Orthologous to human NUDT16 (nudix hydrolase 16).

NR:

description
U8 snoRNA-decapping enzyme-like

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K16855 NUDT16; U8 snoRNA-decapping enzyme

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224132.1 True 1453 mRNA 0.44 4 11354880 11356679

Neighbor

gene id symbol gene type direction distance location
arhgap4b arhgap4b,LOC107560914,LOC107737637,LOC107672018,LOC107741320,LOC107657026 coding downstream 3441 11325493 ~ 11351439 (-)
zgc:158296 LOC107737724,LOC107671977,LOC107562459,LOC107657001,LOC107741322 coding downstream 30004 11322655 ~ 11324876 (-)
ikbkg LOC107737639,LOC107672044,LOC107741321,LOC107657029 coding downstream 33018 11314705 ~ 11321862 (-)
ssr4 ssr4,LOC107671948,LOC107562474,LOC107737640,LOC107741342,LOC107657031,LOC107560913,LOC108436301 coding downstream 41290 11311561 ~ 11313590 (-)
sephs3 sps2,LOC107560911,LOC108275954 coding downstream 43978 11305279 ~ 11310902 (-)
trpc4apb trpc4apb,LOC107737634,LOC107560917,LOC107672047,LOC107741324,LOC107562468 coding upstream 22869 11379548 ~ 11386723 (-)
nsfl1c nsfl1c,LOC107737635,LOC107560918,LOC107741325,LOC107562467,LOC107657023 coding upstream 33882 11390561 ~ 11395473 (-)
wu:fa11c10 wu:fa11c10,LOC107672043,LOC107737632,LOC107560922,LOC107562466,LOC107741327,LOC107657022 coding upstream 55205 11411884 ~ 11428747 (-)
bcl2l1 bcl2l1,LOC107560925,LOC107737630,LOC107671991,LOC107741328,LOC107657020,LOC107576469 coding upstream 90320 11446999 ~ 11464910 (-)
arfgef2 arfgef2,LOC107671990,LOC107737629,LOC107562465,LOC107741338,LOC108436330 coding upstream 109677 11466356 ~ 11488430 (-)
G156785 NA non-coding downstream 1052 11353159 ~ 11353828 (-)
G156762 NA non-coding downstream 110060 11242600 ~ 11244820 (-)
G156759 NA non-coding downstream 191861 11162664 ~ 11163019 (-)
G156726 LOC107737655 non-coding downstream 278919 11071410 ~ 11075961 (-)
LOC122329093 NA non-coding downstream 296885 11050293 ~ 11057995 (-)
LOC122328925 NA non-coding upstream 19498 11376177 ~ 11376688 (-)
G156812 NA non-coding upstream 182944 11539623 ~ 11540045 (-)
G156962 NA non-coding upstream 405761 11762440 ~ 11763023 (-)
G156971 NA non-coding upstream 424888 11781567 ~ 11782366 (-)
G156972 NA non-coding upstream 436924 11793603 ~ 11851710 (-)
G156746 NA other downstream 249657 11100744 ~ 11105223 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 676730 10675680 ~ 10678150 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other downstream 968913 10218473 ~ 10385967 (-)
LOC122328546 rpl10 other upstream 384721 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 388583 11745262 ~ 11745395 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other upstream 407030 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other upstream 443243 11799922 ~ 11801632 (-)
G156985 NA other upstream 566165 11922844 ~ 11924650 (-)

Expression


Co-expression Network