LOC122328445 (zgc:173570,LOC107657062,LOC107559474,LOC107747974)


Basic Information

Item Value
gene id LOC122328445
gene name zgc:173570,LOC107657062,LOC107559474,LOC107747974
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10516716 ~ 10521072 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224134.1
TATATTTTGTACGACTTTGTACCCCCTATTGTTATCtaaaaacaaacgaacaaacaaacaaacaaataaaaaagcgTTTAAATGCGGTTTTCCCCTAAGCTGACTCCGCCCATACAGCTATGACGCGGCGTGACGTTTCCGGTAACACTACTTTAGGTATGAGATATCGGTCCAGAAAGGTGACTTACATCAGTCAGATGTCCTATCAAAAACAAAGATGGGTCAGTCAGAGAGTGGACACATTCATGTTGCTACAAAGGACTTCAAACCGAGATCAGATCTGTGCTCGGGTCTGCAGGTAGATGTTCCTCTAGCTGTGGTTGAGGAGATCCTCCTGAAGCTGCCCGCTCATCAGGTGGTGCGAGTCTGTCGTCTGGTGTGTCACGAGTGGAAGGAGCTGGTGGACAGTGCTGCACACTGGAGAGAGCGCTGCCGGAGAGAGAGGATCCAGCCGTGTGATGCTTCCAGACTGCCAGACGACTGGCGCTTGTTTTACTTCTTAACTAGGAAACGACGTAACTTGCTTAAGAATCCCAGAGCGGAAGAGGAGTTCAGGGGATGGAAGATCGTACAGAATGGCGGTGACTGCTGGAAAGTGGAAGATTTGATAGAAAACCCAAATTCTCCCAAAATCTCAAAGTACTTTGTCACCTCATACTGGTTGTGTTTAAAGCAGCAGCTGATTGATTTGAGGAAAGAAGGTTACAGCGCTGCTTTCATGGATCAGCTGCAGCCTCATATCAAAATATCAGACTGGTTCGCAGCACGCTGTGATTGTGGAAGCGTGTATCAGATCAGTGTAGAGTTGCTCGATCAGAAGAAGAAACCCATCACTGTCTTTGAGCCTAACCCGGTTTTCTTTCCACAGTGGAACGATCAGCAGTGGTGTGAAatGACGCATGTCTTTAAGGATTATGGACCCGGGGTTCGGTTTATTCGTTTCACTCATGGAGGGAAGGATACACAGTTTTGGGCAGGCTGGTATGGGATACGGGTCACTAACAGTAGTGTGGAGATCTGTCCGGCTGAAGAGAGATAGTGATGAGTTATGAGAAACGCAGGGCTGCCAACTTTTGTTTTCAGCTTGGAGTGAGATTTCCCGAAAACTAACTAAATATAGGCTTTTATgggagtttttattttgtgaagacgttaaataataatgtgtttatagCCTAtagtttagtttcagttttaattagGGCTCAGCAGGGTTAAGTGTCTAAAGTGTCTAATTTAAAGTTATAATTTGGTTATGATGGTTAGATGACATGATCATGATATGTAACTGTGCTCTCTTGATCACTTTTTAGCAAAAAAACGTCAATGCACATTTGATCGAAAGCCTAGCGGAGTGATCACAAGATGCAGGCAAAAGTTTTGCATTGTTTACAGAAAggatgcttttttgtttttcttcaaggcAAAAACCTAGAATGCCTAATGATGGTTTGATTGCTTGAGCTACATGAGAAGTCAAATAATTTTGCCGACCAGCTAGATTTAATGTGGGGGTGGTTCGGGTCTGGTACAGAGTTAAATGTGTGTGATGCTGAAACAGTAAAGCCCCGCCCATCTTTCATTTGATTGGCCATCTAAATCATTTTGACATTCACGAGCGCTGTCTGGAGTTTTTATCACTCCAAcaacaaacacagcagaaaataaatattggaTTTGCCAgggacattttttttgcatgacaaAATGGATGCGTGGTGTGAGAGCATGAGAGTTGGCAGCCCTGGAAACGCTATTATATAACCCCAAACTTAAAAGTCTTATTAGGAAAGTTAAtatatcagtgtttttctttattgaacTCATgatcttttgtatttatttttttaactatgtaTAAATCAAGTTTTAAATGGGTTATTTTTCAAAAGGCCTCTTGGACCTCCTCTTATTCATCGATGACTTATTTCTCGAATGTTGTTGCACCATTTTCATGGTGCTCTTGTGCTTTGCACAGAAAatgtattctcatagcttcatatcATTAAGGTCGACCCATCCATGATGTAACTGATGGactgttttaatgatgtccttactacctttctgtgCCTTGAACAGTCAGTTGCGCTGCTGTCTGTAGACTGTCAAatgctctcagatttcatcaaaaacgcCTTCATTTTTGTTCCAAAGGTTAACGAAGGTCTTGCAGGTTTGAAATGAGATGTGGGCttgtaattaacttttttttgattgaGCTATCCCAGTcgttaaagctttaaaaagaagGGCGTTTCAGACATGTTCCCCTAACATGAATTTATCTCATCAACTGCATATAACTGCTTCTCTTTGAAAGGATTGCTTAAAACTGAAGTATTAGGGGAGTGAGTTAAAATGTAGCAGTGGAAAGGGCTGATCTTATACATCTGACGTTAGAGaaataacataagaaaaaaaatattttttccacctAGTGTAAAAAGTCATTTGGTATATACTTTGTACATATAACCACATCTATAACCATATAACCACATCACTTATACAGtttctgtataaatattttttcatccttttattcaaaatacaagTCTCTCATATACTCTGGTGATTCAACTTGACATAAAACAGCATGTGAGACGAGACACTCATATGGCTCTGTAAAGTCTTCTAAATTAAGCTTTTGACAGACATTGGCACACAAACGAAAGTATTTACTTCAAAATCTCCTTCATTGTTAGACAAATAAGAACTGGCACATCTTACCCCACTCTACCCTACCATAGCTGAATATCTTCGTTGTGAAGCATCGTTAAAGTCTTAAAGGCAAAATTTGCACACATATCATCTGACTATGTGATATGAGTACCGAGGTAAatgatgtggaaagcacctgtCAAGTAAAAGCTACTGTTACTTTCCTGATTAAAAAcctgtacaaaaataaaacaatcctATTGGTTTACACCCA
>XM_043224135.1
TATATTTTGTACGACTTTGTACCCCCTATTGTTATCtaaaaacaaacgaacaaacaaacaaacaaataaaaaagcgTTTAAATGCGGTTTTCCCCTAAGCTGACTCCGCCCATACAGCTATGACGCGGCGTGACGTTTCCGGTAACACTACTTTAGGTCCAGAAAGGTGACTTACATCAGTCAGATGTCCTATCAAAAACAAAGATGGGTCAGTCAGAGAGTGGACACATTCATGTTGCTACAAAGGACTTCAAACCGAGATCAGATCTGTGCTCGGGTCTGCAGGTAGATGTTCCTCTAGCTGTGGTTGAGGAGATCCTCCTGAAGCTGCCCGCTCATCAGGTGGTGCGAGTCTGTCGTCTGGTGTGTCACGAGTGGAAGGAGCTGGTGGACAGTGCTGCACACTGGAGAGAGCGCTGCCGGAGAGAGAGGATCCAGCCGTGTGATGCTTCCAGACTGCCAGACGACTGGCGCTTGTTTTACTTCTTAACTAGGAAACGACGTAACTTGCTTAAGAATCCCAGAGCGGAAGAGGAGTTCAGGGGATGGAAGATCGTACAGAATGGCGGTGACTGCTGGAAAGTGGAAGATTTGATAGAAAACCCAAATTCTCCCAAAATCTCAAAGTACTTTGTCACCTCATACTGGTTGTGTTTAAAGCAGCAGCTGATTGATTTGAGGAAAGAAGGTTACAGCGCTGCTTTCATGGATCAGCTGCAGCCTCATATCAAAATATCAGACTGGTTCGCAGCACGCTGTGATTGTGGAAGCGTGTATCAGATCAGTGTAGAGTTGCTCGATCAGAAGAAGAAACCCATCACTGTCTTTGAGCCTAACCCGGTTTTCTTTCCACAGTGGAACGATCAGCAGTGGTGTGAAatGACGCATGTCTTTAAGGATTATGGACCCGGGGTTCGGTTTATTCGTTTCACTCATGGAGGGAAGGATACACAGTTTTGGGCAGGCTGGTATGGGATACGGGTCACTAACAGTAGTGTGGAGATCTGTCCGGCTGAAGAGAGATAGTGATGAGTTATGAGAAACGCAGGGCTGCCAACTTTTGTTTTCAGCTTGGAGTGAGATTTCCCGAAAACTAACTAAATATAGGCTTTTATgggagtttttattttgtgaagacgttaaataataatgtgtttatagCCTAtagtttagtttcagttttaattagGGCTCAGCAGGGTTAAGTGTCTAAAGTGTCTAATTTAAAGTTATAATTTGGTTATGATGGTTAGATGACATGATCATGATATGTAACTGTGCTCTCTTGATCACTTTTTAGCAAAAAAACGTCAATGCACATTTGATCGAAAGCCTAGCGGAGTGATCACAAGATGCAGGCAAAAGTTTTGCATTGTTTACAGAAAggatgcttttttgtttttcttcaaggcAAAAACCTAGAATGCCTAATGATGGTTTGATTGCTTGAGCTACATGAGAAGTCAAATAATTTTGCCGACCAGCTAGATTTAATGTGGGGGTGGTTCGGGTCTGGTACAGAGTTAAATGTGTGTGATGCTGAAACAGTAAAGCCCCGCCCATCTTTCATTTGATTGGCCATCTAAATCATTTTGACATTCACGAGCGCTGTCTGGAGTTTTTATCACTCCAAcaacaaacacagcagaaaataaatattggaTTTGCCAgggacattttttttgcatgacaaAATGGATGCGTGGTGTGAGAGCATGAGAGTTGGCAGCCCTGGAAACGCTATTATATAACCCCAAACTTAAAAGTCTTATTAGGAAAGTTAAtatatcagtgtttttctttattgaacTCATgatcttttgtatttatttttttaactatgtaTAAATCAAGTTTTAAATGGGTTATTTTTCAAAAGGCCTCTTGGACCTCCTCTTATTCATCGATGACTTATTTCTCGAATGTTGTTGCACCATTTTCATGGTGCTCTTGTGCTTTGCACAGAAAatgtattctcatagcttcatatcATTAAGGTCGACCCATCCATGATGTAACTGATGGactgttttaatgatgtccttactacctttctgtgCCTTGAACAGTCAGTTGCGCTGCTGTCTGTAGACTGTCAAatgctctcagatttcatcaaaaacgcCTTCATTTTTGTTCCAAAGGTTAACGAAGGTCTTGCAGGTTTGAAATGAGATGTGGGCttgtaattaacttttttttgattgaGCTATCCCAGTcgttaaagctttaaaaagaagGGCGTTTCAGACATGTTCCCCTAACATGAATTTATCTCATCAACTGCATATAACTGCTTCTCTTTGAAAGGATTGCTTAAAACTGAAGTATTAGGGGAGTGAGTTAAAATGTAGCAGTGGAAAGGGCTGATCTTATACATCTGACGTTAGAGaaataacataagaaaaaaaatattttttccacctAGTGTAAAAAGTCATTTGGTATATACTTTGTACATATAACCACATCTATAACCATATAACCACATCACTTATACAGtttctgtataaatattttttcatccttttattcaaaatacaagTCTCTCATATACTCTGGTGATTCAACTTGACATAAAACAGCATGTGAGACGAGACACTCATATGGCTCTGTAAAGTCTTCTAAATTAAGCTTTTGACAGACATTGGCACACAAACGAAAGTATTTACTTCAAAATCTCCTTCATTGTTAGACAAATAAGAACTGGCACATCTTACCCCACTCTACCCTACCATAGCTGAATATCTTCGTTGTGAAGCATCGTTAAAGTCTTAAAGGCAAAATTTGCACACATATCATCTGACTATGTGATATGAGTACCGAGGTAAatgatgtggaaagcacctgtCAAGTAAAAGCTACTGTTACTTTCCTGATTAAAAAcctgtacaaaaataaaacaatcctATTGGTTTACACCCA

Function

NR:

description
PREDICTED: F-box only protein 44-like isoform X1

GO:

id name namespace
GO:0030163 protein catabolic process biological_process

KEGG:

id description
K10103 FBXO44; F-box protein 44

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224134.1 True 2938 mRNA 0.40 7 10516716 10521072
XM_043224135.1 False 2925 mRNA 0.40 7 10516716 10521072

Neighbor

gene id symbol gene type direction distance location
LOC122329230 dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding downstream 59798 10449485 ~ 10456918 (-)
LOC122328599 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding downstream 69498 10432764 ~ 10447218 (-)
LOC122328780 NA coding downstream 170624 10343250 ~ 10346092 (-)
LOC122328770 pifo coding downstream 236177 10243928 ~ 10280539 (-)
rnf41 rnf41,LOC107723732,LOC107756409 coding downstream 304289 10204039 ~ 10212427 (-)
LOC122328446 LOC107707743,LOC107671949,LOC107657006,LOC107603135,LOC107559475 coding upstream 1026 10522098 ~ 10525372 (-)
LOC122328736 LOC107672006,LOC107603149,LOC107707753,LOC107657067 coding upstream 47493 10568565 ~ 10582430 (-)
LOC122328766 sdcbp2,LOC107657068,LOC107672005 coding upstream 141191 10662263 ~ 10674097 (-)
LOC122328797 LOC107747975,LOC107657065,LOC107672050,LOC570014,LOC107559461,LOC107559462,LOC107747988,LOC107603112 coding upstream 157933 10679005 ~ 10686715 (-)
LOC122328796 LOC107747975,LOC107657065,LOC107672050,LOC570014,LOC107559461,LOC107747988,LOC107603112 coding upstream 168592 10689664 ~ 10694950 (-)
G156364 NA non-coding downstream 128101 10386954 ~ 10388615 (-)
G156341 NA non-coding downstream 164835 10348141 ~ 10351881 (-)
LOC122328389 NA non-coding downstream 222673 10291465 ~ 10294043 (-)
G156313 NA non-coding downstream 399761 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 457413 10058011 ~ 10059303 (-)
G156452 NA non-coding upstream 19827 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 146885 10667957 ~ 10675579 (-)
G156468 NA non-coding upstream 175380 10696452 ~ 10696677 (-)
G156469 NA non-coding upstream 177525 10698597 ~ 10700224 (-)
G156471 NA non-coding upstream 181524 10702596 ~ 10702821 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other downstream 130749 10218473 ~ 10385967 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other downstream 149347 10363905 ~ 10367369 (-)
LOC122329224 NA other downstream 156930 10355941 ~ 10359786 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 683034 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 708347 9801785 ~ 9808369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 154608 10675680 ~ 10678150 (-)
G156746 NA other upstream 579672 11100744 ~ 11105223 (-)
LOC122328546 rpl10 other upstream 1220328 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 1224190 11745262 ~ 11745395 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other upstream 1242637 11763709 ~ 11857968 (-)

Expression


Co-expression Network