LOC122328446 (LOC107707743,LOC107671949,LOC107657006,LOC107603135,LOC107559475)


Basic Information

Item Value
gene id LOC122328446
gene name LOC107707743,LOC107671949,LOC107657006,LOC107603135,LOC107559475
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10522098 ~ 10525372 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224136.1
gcaGGCAACGTGATGGGAATTACCAAATCATTTTTACAACATTAGATTGCATGATAGAGAAACACCCAGGGTTTTTGGGGGTCTTTTGCTTTGCAGAGACATAAGGGTGTTCTCGACATCCAAGTCTCGCGAGAGCGTTGGACAGCTGACAGCTGATTTCTCCTTGGCTGTAGGAGGAAACCACAATCTTCAGTACTTTTGGTTTGCGTCCCAAGGGAATACGTTCGGGTTTTGGCTAGAGTCATGTGCTCGGGTCTGCAGGTAGATGTTCCTCTAGCTGTGGTTGAGGAGATCCTCCTGAAGCTGCCCGCTCATCAGGTGGTGCGAGTCTGTCGTCTGGTGTGTCACGAGTGGAAGGAGCTGGTGGACAGTGCTGCACACTGGAGAGAGCGCTGCCGGAGAGAGAGGATCCAGCCGTGTGATGCTTCCAGACTGCCAGACGACTGGCGCTTGTTTTACTTCTTAACTAGGAAACGACGTAACTTGCTCAAGAATCCCAGAGCGGAAGATAAACTTAAAGGTTGGAATATTATACAGAATGGAGGTGACCGGTGGGCAGCGGAGGACAATAGGAAACCATTTCCGGATGAGACCgtcacaaaatgttttgtaacatctTACGGGTTATGTTTGAAGCAACAGGTTATTGATTTGAAGAAAGAAGGCTACGTTGATGCATTCATGGATCAAATGCAACCTCCTATCAAAATCACAGACTGGTACGCACCACGCCTCGATTGTGGGTGTCTTTATGAGATCAATGTACAGTTGcttgatcacaaaaaaaaacatatatgttcCATTGAGCCTGAGAAAGTTCGTTTTGAACAGTGGAATGATGAGCCGTGGTGTCAAaTGACTCATATCTTTAGGGATTATGGACCCGGGGTTCGGTTTATTCGTTTCACTCATGGAGGGCAGGATACACAGTTTTGGGCAGGCTGGTATGGGATACGGGTCACTAACAGTAGTGTGGAGATCTGTCCGGCTGAAGAGAGATAGtgcttatacatatatataattctaatgaTGTAATAtgctttaaagtacatttttacaaagctgTATGGATTTGTTCTCAATAATTGCTATGTGGTAAACCGTTCAAATAAAGGATCTTATTAAATACAGGTATAGATATGCagttaacaaattattttacttaatgaAATTAATCAGTTTGCATAACTGCAGTAACTGATTACAAAATGAAGGTGATGGTATGTCCTTTAGTGCAGATTCACCACAGCTGCAGCAAGTAATTTGGAGGTTTATGGTTTTCTATTGATTTTACtgaacataattaaaatttaaatgtcttCGGGATGCGGTTGTTGCAGTTATTAAGTTATTGTATAGTTCTAAATGAATGTGAGAAATGTATACAATGGAAAGAAAGTGAATGGATACGAGAATGTTACaatgttttgcaaatgtttttaacaataaaaacataataaaatatatcacatttaCAGAAA

Function

NR:

description
PREDICTED: F-box only protein 6-like isoform X1

GO:

id name namespace
GO:0030163 protein catabolic process biological_process

KEGG:

id description
K10100 FBXO6; F-box protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224136.1 True 1481 mRNA 0.41 6 10522098 10525372

Neighbor

gene id symbol gene type direction distance location
LOC122328445 zgc:173570,LOC107657062,LOC107559474,LOC107747974 coding downstream 1026 10516716 ~ 10521072 (-)
LOC122329230 dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding downstream 65180 10449485 ~ 10456918 (-)
LOC122328599 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding downstream 74880 10432764 ~ 10447218 (-)
LOC122328780 NA coding downstream 176006 10343250 ~ 10346092 (-)
LOC122328770 pifo coding downstream 241559 10243928 ~ 10280539 (-)
LOC122328736 LOC107672006,LOC107603149,LOC107707753,LOC107657067 coding upstream 43193 10568565 ~ 10582430 (-)
LOC122328766 sdcbp2,LOC107657068,LOC107672005 coding upstream 136891 10662263 ~ 10674097 (-)
LOC122328797 LOC107747975,LOC107657065,LOC107672050,LOC570014,LOC107559461,LOC107559462,LOC107747988,LOC107603112 coding upstream 153633 10679005 ~ 10686715 (-)
LOC122328796 LOC107747975,LOC107657065,LOC107672050,LOC570014,LOC107559461,LOC107747988,LOC107603112 coding upstream 164292 10689664 ~ 10694950 (-)
cdc42l2 LOC107603155,LOC107707751,LOC107672009 coding upstream 180611 10705983 ~ 10709169 (-)
G156364 NA non-coding downstream 133483 10386954 ~ 10388615 (-)
G156341 NA non-coding downstream 170217 10348141 ~ 10351881 (-)
LOC122328389 NA non-coding downstream 228055 10291465 ~ 10294043 (-)
G156313 NA non-coding downstream 405143 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 462795 10058011 ~ 10059303 (-)
G156452 NA non-coding upstream 15527 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 142585 10667957 ~ 10675579 (-)
G156468 NA non-coding upstream 171080 10696452 ~ 10696677 (-)
G156469 NA non-coding upstream 173225 10698597 ~ 10700224 (-)
G156471 NA non-coding upstream 177224 10702596 ~ 10702821 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other downstream 136131 10218473 ~ 10385967 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other downstream 154729 10363905 ~ 10367369 (-)
LOC122329224 NA other downstream 162312 10355941 ~ 10359786 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 688416 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 713729 9801785 ~ 9808369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 150308 10675680 ~ 10678150 (-)
G156746 NA other upstream 575372 11100744 ~ 11105223 (-)
LOC122328546 rpl10 other upstream 1216028 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 1219890 11745262 ~ 11745395 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other upstream 1238337 11763709 ~ 11857968 (-)

Expression


Co-expression Network