LOC122328452 (wnt7a,LOC107684886,LOC107736972,LOC107713763,LOC107555800,LOC568110,LOC108276349,LOC107564804)


Basic Information

Item Value
gene id LOC122328452
gene name wnt7a,LOC107684886,LOC107736972,LOC107713763,LOC107555800,LOC568110,LOC108276349,LOC107564804
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1009903 ~ 1018911 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224144.1
ACGCGACCCCTGTACGTGATGGGCTGGGCAGCACCTCGGGAACACGCCCAGGTATATAAAGCACAGCTGGAGGATGAAGGGCTCAGACCTGCGCCGCGATGCGCGCTCAACACGAGCTGGAGACACCTTGACGGTGGAGCAAGTGGAAAACCCAGGCTACTTCGAACGGACTTTACTTAACCGCTGTTCCTACCCGAAAAGCGCAGTTTCTCGTTACGTCTGAGCGAAACGAGACGGATCCATCATGAGCAGGAGAACACGACGCTGGATATTTCGCATTTTTCTTTGTCTCGGAATAATCTACTTGAAAATGGGGCGGTTCTCCACCGTGCTGGCTCTAGGAGCGAGCATCATATGCAACAAGATCCCTGGCCTGGCGCCCCGGCAGCGCATCATCTGTCAGAGCCGGCCGGACGCCATCATCGTGATCGGACAGGGCGCGCAGATGGGCATCAACGAGTGCCAGTTTCAGTTCAAGCACGGCCGCTGGAACTGCTCCGCGCTCGGCGAGAGGACCGTCTTCGGAAAAGAGCTGAAAGTGGGCAGCAAGGAGGCAGCGTTCACGTACGCCATCGTGGCCGCAGGAGTGGCTCACGCCGTCACAGCCGCGTGCACGCAGGGAAACCTCAGTGAATGCAGCTGTGACAAAGACAAGCAGGGCTTCCACGGCCACGCAGACGGCTGGAAGTGGGGCGGCTGCTCGGCGGACATCCACTACGGCCTGGGCTTCTCCAAAGTCTTCATGGATGCCAGAGAGATCAAACACAGTGCCAGGACACTTATGAACCTGCACAACAACGAAGTCGGGCGGAAGGTCCTGGAGAGGAACATGCGTCTAGAGTGTAAATGTCACGGCGTGTCTGGATCCTGCACCACCAGGACCTGCTGGATGACCCTCCCCAAGTTTCGTGAGCTTGGCTTTATCCTCAAAGACAAATACAGCCACGCCATTCACGTGGAGCCGGTCAAAGCCACCCGCCACAAGAGGCCCACCTTCCTCAAGGTCAAGAAGCCCTACTCGTACCGCAAGCCCATGGACACGGACCTGGTGTACATCGAGAAGTCGCCCAACTACTGCGAGGCGGACCCGGTGACGGGCAGCGTGGGGACTCAGGGCCGGGTGTGCAACAAAACGCTGCTGCACCATCCCAACGGCTGCGACCTGATGTGCTGTGGCCGGGGATACAACACACACCAGTACTCACGCGTCTGGCAGTGCAACTGCAAGTTCTTCTGGTGCTGCTACGTCCGGTGCAACACCTGTAGTGAGAGGACAGAGGTGTACACGTGCAAGTGAGCCGCTCTTACGGACCTCGTTCTGATACAAGAGGACTCTATGAGGTGGCATCTGTTCTTTTGCACAAGGCTCTACTTCAGACTCGCTTTAATGGAAGATCATTGAGATCGTCAAAGCTTTACTCTGGAGAAAGAGGAACTGAAAGTCTAAATCACTGTCTGAATCTGTCTGGATTAAAACAAGGATCTCCGTGGAACCCAGAACAGCAACCTGCACCTTGATTTTACCGATGAGCTACTGAGACACGGACATCTTTGCAGGCATGCAGCAAACCTATATTGACAAACAGAGCAAAACTAGAAATTCCAGAAGTAAAGGGAAAGGACTTTCTAATAgttttttgcttcaaatcaaTCCAGGTGATTTATTACCACCCAAAGTGCTTTGTTTTCTAAAAGTGCTTAACATTCGATTACTCTTTATTTGAAGTtttccttgttacagtgtaattacacatttaagtactgagtaatattaaagtgtccctattatgggttacgaaaggtttatatatttttttggggtGTCCTAAATGACAGGTTGAAATACATGCAAGGCCAAAATATAGGCCTTTATAatccacatttattttatatttatattacatttcatttgaagCAGTAATTGCgagcttttaatgctccaaaagcggcacctagtggcaaagaatgaatgtacattttcattcagacaaacgctaaaagaccaacaagtgggtggcaatatgttaatgtttcatttcgGGTCAACATGTTTTAAACATGACTCATCTCAAACCTTCAGAGTCAGCTCCTTTCCTTTGAGAGACAATTACTTTATAGACTTTTAGGCTTAAAACTTTGCAAGATGTTTTCGTTCGCTTAGAGCTGTGACACTGCATTAAAGCTCGCTTTCAGAAattcataataggggcactttaatgaactacatgtacttactatatggttagggtttgtcttggggttacttgcatgtaattatgcataattaattgttattataatagtaagtacatgttacatgtaacaaggacaccttaaaatagcgTTACCAATTATGCTTAAGTAAGAATATTTAAGTGTACTCAATTATGCTATTTTGGGACGCCatgaatataaactaaaatgtacttttaacatACTTTCTCTGCAGAAACCCACTAGTGCATGAAAGCTAGTGCCTCtaaatagcacagttgagtgCACTTGatgtttttaagattattttaagaagtacagccttttttttgtgttttaattacaaaatgagTGCGTCAAAATAGACcatattatgctttttaaattgcCTTATTtaagatttgtattttgtaaGCGAATTCCTAATATAGAAAAATGTATAGGAAAAGAATATTGGAACCAAGGTTGCTGATTGCGCTGTTGTTAAATTCCTCCAAAcaactgattttatttatttattaaaaacaatgttgttaACTGTAATTGACGAGACGCTGGAAACAAACAGCGCATCTGCATCTCTGCTCATGAATACACTGGGATTTGTATCTTCTGAAAGAATagctttttttagtttacaagACAagaagcaatatttttttttttttctatgagaAATTTCCTGTATGCTGCTAGTCTGGAATAATCACATTCGCTGTAATATTACCAAACTACTGACTACAAGATTTTGTAACTGGTATAGTGATGAATCCAGAAATGTAGAATTTACActgaaattgtaaaatattggtAAGAGAgtatattttgtaaaagaatatttttatatgaatgttttatttatactttgtCATTTCTGAACACCCGATGCATTGCGGGTGACAAAGTTGGAATGTggatgttaattattaaaatcaa
>XM_043224145.1
CACGCGACCCCTGTACGTGATGGGCTGGGCAGCACCTCGGGAACACGCCCAGGTATATAAAGCACAGCTGGAGGATGAAGGGCTCAGACCTGCGCCGCGATGCGCGCTCAACACGAGCTGGAGACACCTTGACGGTGGAGCAAGTGGAAAACCCAGGCTACTTCGAACGGACTTTACTTAACCGCTGTTCCTACCCGAAAAGCGCAGTTTCTCGTTACGTCTGAGCGAAACGAGACGGATCCATCATGAGCAGGAGAACACGACGCTGGATATTTCGCATTTTTCTTTGTCTCGGAATAATCTACTTGAAAATGGGGCGGTTCTCCACCGTGCTGGCTCTAGGAGCGAGCATCATATGCAACAAGATCCCTGGCCTGGCGCCCCGGCAGCGCATCATCTGTCAGAGCCGGCCGGACGCCATCATCGTGATCGGACAGGGCGCGCAGATGGGCATCAACGAGTGCCAGTTTCAGTTCAAGCACGGCCGCTGGAACTGCTCCGCGCTCGGCGAGAGGACCGTCTTCGGAAAAGAGCTGAAAGCAGCAAGGAGGCAGCGTTCACGTACGCCATCGTGGCCGCAGGAGTGGCTCACGCCGTCACAGCCGCGTGCACGCAGGGAAACCTCAGTGAATGCAGCTGTGACAAAGACAAGCAGGGCTTCCACGGCCACGCAGACGGCTGGAAGTGGGGCGGCTGCTCGGCGGACATCCACTACGGCCTGGGCTTCTCCAAAGTCTTCATGGATGCCAGAGAGATCAAACACAGTGCCAGGACACTTATGAACCTGCACAACAACGAAGTCGGGCGGAAGGTCCTGGAGAGGAACATGCGTCTAGAGTGTAAATGTCACGGCGTGTCTGGATCCTGCACCACCAGGACCTGCTGGATGACCCTCCCCAAGTTTCGTGAGCTTGGCTTTATCCTCAAAGACAAATACAGCCACGCCATTCACGTGGAGCCGGTCAAAGCCACCCGCCACAAGAGGCCCACCTTCCTCAAGGTCAAGAAGCCCTACTCGTACCGCAAGCCCATGGACACGGACCTGGTGTACATCGAGAAGTCGCCCAACTACTGCGAGGCGGACCCGGTGACGGGCAGCGTGGGGACTCAGGGCCGGGTGTGCAACAAAACGCTGCTGCACCATCCCAACGGCTGCGACCTGATGTGCTGTGGCCGGGGATACAACACACACCAGTACTCACGCGTCTGGCAGTGCAACTGCAAGTTCTTCTGGTGCTGCTACGTCCGGTGCAACACCTGTAGTGAGAGGACAGAGGTGTACACGTGCAAGTGAGCCGCTCTTACGGACCTCGTTCTGATACAAGAGGACTCTATGAGGTGGCATCTGTTCTTTTGCACAAGGCTCTACTTCAGACTCGCTTTAATGGAAGATCATTGAGATCGTCAAAGCTTTACTCTGGAGAAAGAGGAACTGAAAGTCTAAATCACTGTCTGAATCTGTCTGGATTAAAACAAGGATCTCCGTGGAACCCAGAACAGCAACCTGCACCTTGATTTTACCGATGAGCTACTGAGACACGGACATCTTTGCAGGCATGCAGCAAACCTATATTGACAAACAGAGCAAAACTAGAAATTCCAGAAGTAAAGGGAAAGGACTTTCTAATAgttttttgcttcaaatcaaTCCAGGTGATTTATTACCACCCAAAGTGCTTTGTTTTCTAAAAGTGCTTAACATTCGATTACTCTTTATTTGAAGTtttccttgttacagtgtaattacacatttaagtactgagtaatattaaagtgtccctattatgggttacgaaaggtttatatatttttttggggtGTCCTAAATGACAGGTTGAAATACATGCAAGGCCAAAATATAGGCCTTTATAatccacatttattttatatttatattacatttcatttgaagCAGTAATTGCgagcttttaatgctccaaaagcggcacctagtggcaaagaatgaatgtacattttcattcagacaaacgctaaaagaccaacaagtgggtggcaatatgttaatgtttcatttcgGGTCAACATGTTTTAAACATGACTCATCTCAAACCTTCAGAGTCAGCTCCTTTCCTTTGAGAGACAATTACTTTATAGACTTTTAGGCTTAAAACTTTGCAAGATGTTTTCGTTCGCTTAGAGCTGTGACACTGCATTAAAGCTCGCTTTCAGAAattcataataggggcactttaatgaactacatgtacttactatatggttagggtttgtcttggggttacttgcatgtaattatgcataattaattgttattataatagtaagtacatgttacatgtaacaaggacaccttaaaatagcgTTACCAATTATGCTTAAGTAAGAATATTTAAGTGTACTCAATTATGCTATTTTGGGACGCCatgaatataaactaaaatgtacttttaacatACTTTCTCTGCAGAAACCCACTAGTGCATGAAAGCTAGTGCCTCtaaatagcacagttgagtgCACTTGatgtttttaagattattttaagaagtacagccttttttttgtgttttaattacaaaatgagTGCGTCAAAATAGACcatattatgctttttaaattgcCTTATTtaagatttgtattttgtaaGCGAATTCCTAATATAGAAAAATGTATAGGAAAAGAATATTGGAACCAAGGTTGCTGATTGCGCTGTTGTTAAATTCCTCCAAAcaactgattttatttatttattaaaaacaatgttgttaACTGTAATTGACGAGACGCTGGAAACAAACAGCGCATCTGCATCTCTGCTCATGAATACACTGGGATTTGTATCTTCTGAAAGAATagctttttttagtttacaagACAagaagcaatatttttttttttttctatgagaAATTTCCTGTATGCTGCTAGTCTGGAATAATCACATTCGCTGTAATATTACCAAACTACTGACTACAAGATTTTGTAACTGGTATAGTGATGAATCCAGAAATGTAGAATTTACActgaaattgtaaaatattggtAAGAGAgtatattttgtaaaagaatatttttatatgaatgttttatttatactttgtCATTTCTGAACACCCGATGCATTGCGGGTGACAAAGTTGGAATGTggatgttaattattaaaatcaa

Function

symbol description
wnt7a Enables cytokine activity. Involved in several processes, including cartilage development; embryonic limb morphogenesis; and regulation of synapse assembly. Is active in glutamatergic synapse. Implicated in Fuhrmann syndrome and Schinzel type phocomelia. Biomarker of leiomyoma.

NR:

description
PREDICTED: protein Wnt-7a-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224144.1 True 3150 mRNA 0.44 4 1009903 1018910
XM_043224145.1 False 3147 mRNA 0.44 4 1009903 1018911

Neighbor

gene id symbol gene type direction distance location
nup210 nup210,LOC107684885,LOC107555788,LOC107675171,LOC107736952,LOC107564796,LOC107713743 coding downstream 18459 965674 ~ 991444 (-)
LOC122329272 LOC107736949,LOC107675168,LOC107564797,LOC107555789,LOC107684883,LOC108181449,LOC107713762,LOC107684884,LOC107555806 coding downstream 50912 905611 ~ 958991 (-)
gp9 LOC107736950,LOC107675164,LOC107564798 coding downstream 104442 903508 ~ 905461 (-)
raf1a raf1a,LOC107713759,LOC107684881,LOC108427788 coding downstream 114580 883192 ~ 895323 (-)
tnnc1a tnnc1a,LOC108427795,LOC107684904,LOC107736944,LOC100708228,LOC107566179,LOC107568483,LOC103385538 coding downstream 175322 808924 ~ 834581 (-)
trnam-cau_118 NA coding upstream 861 1019772 ~ 1019843 (-)
ptpdc1b LOC107736953,LOC107564794,LOC107684888,LOC107555790,LOC107713765 coding upstream 5746 1024657 ~ 1032351 (-)
adtrp1 zgc:112175,LOC107684890,LOC107713766,LOC107555804 coding upstream 13581 1032492 ~ 1037268 (-)
mybl2a NA coding upstream 20010 1038921 ~ 1044635 (-)
sgk2a sgk2a,LOC107684892,LOC107713751,LOC107555799,LOC107736955,LOC107675170 coding upstream 25909 1044820 ~ 1051472 (-)
LOC122328476 NA non-coding downstream 46326 960274 ~ 963577 (-)
G153893 cnbp non-coding downstream 110137 841719 ~ 899766 (-)
G153911 NA non-coding downstream 233853 770513 ~ 776050 (-)
G153760 NA non-coding downstream 326792 679034 ~ 683111 (-)
LOC122328559 NA non-coding downstream 425412 583143 ~ 584491 (-)
G153966 NA non-coding upstream 186568 1205479 ~ 1206602 (-)
G153967 NA non-coding upstream 187789 1206700 ~ 1207587 (-)
G153984 LOC107727750,LOC107691341,LOC107566873 non-coding upstream 370451 1389362 ~ 1393135 (-)
LOC122328606 NA non-coding upstream 400946 1419857 ~ 1420454 (-)
LOC122328609 NA non-coding upstream 574701 1593612 ~ 1594209 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 127719 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 224024 779085 ~ 785879 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other upstream 34466 1053377 ~ 1064774 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other upstream 488787 1507698 ~ 1512329 (-)
LOC122328833 LOC107669693 other upstream 1083799 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1750571 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1768385 2787296 ~ 2798533 (-)

Expression


Co-expression Network