LOC122328465 (LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177)


Basic Information

Item Value
gene id LOC122328465
gene name LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14564464 ~ 14569658 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224161.1
cattgtcagctaatttaatttttggttgaactacaCCTTTAAATATCTAATCAAATACGTTTTGTTTCCTTTCATCCTCTTAGACTTTCACCCTGTTCTGGTGCTGTGGAAAGATTCTGGATCTCTCTGGACAAATGTTGCAGCAGTTATCACAGTCTAATGCGTGTGATGGGAGAATGGCTACCCCCTTCCCGTGCCAGCCTGGTTGGTACAGTCCGCACCTCAGTCAATGGTGTTTTAAACCCTCGATGTTACTAGAATGTGCCTTTTAGAGCGAGGGAGGGGGTTTATGCTCACAGAGCCGTGGTCATTACAGCAGTACAGCATCATCACCTTCTGCGTGCAGCATCTCAGACAGACTAGAGCTCTGAAGACCGGCGCAAAGTCTTTTTTAAGTAGGCCAAATAAGATTCAAAACTGAGACCATGACACAGGGCAAGGTTTCAGTGACAAACAAGTCAAACAATGGTTCGGATGTTCAGCCGATGGCCTCAGCTCCTCCAAGTTATGAGGAGGCAACTGCTaGTGGAAGCCCTTGTTATAGTGGCTCTTATCCTGGAGATAGCGAGATGCTCACAGAATTCAGCTGGGACGACCAAAACATCAGGAGGATATTCATCCGCAAGGTGTACACCATCCTCATGCTCCAGCTATCTGTCACATTAGCCTTTGtagctgttttcattttctgTGAACCTGTGAAATATTACGTACAGTCCAACCCTGGCTTGTACTGGGCTTCATATGTAGTGTTTTTTGTCACATATCTGACCCTATCCTGTTGCCGTGGACCCCGGAGGCAGTTCCCATGGAATCTGATTCTGCTCATTATTTTTACTCTGTCTCTTTCGTACATGACAGGAATGCTGTCCAGCTACTACAACACTAAATCTGTCATCATCTGCCTGGGTATTACTGTCTTGGTGTGCCTTGTCATTACCATCTTTAGTTTCCAAACCAAGATTGATATTACTTCATACCAAGGTGTGCTGCTAGTTTTCTGCACAGTATTGTTTATTTGTGGACTTGTCCTGGCGGTTATCCTTCCCTTCGGATATGTTCCATGGTTGCATGCTGTCTATGCTGCCTTGGGAGCAATACTGTTTTGCATGTTCCTGGCGTTTGACACACAGATGCTGATGGGGAAAAAGCAATACACCATAAGTCCTGAGGAACACATCTTTGCCACCCTCAGCCTATACCTGGACATTGTTTAcatcttctctttcttcctccAGTTGTTTGGCACTCCAGAGCGGGAGTGAATGTGCTGTTAACCTGAAGTCTtccgtctgtctctctgaaCTGAGTGACCGTGTCCTTCCAGCATGATGTGGATCTTCGGTGCATGCTGTCGTGTTTAAGCTCACCTTAGCTTTTTACGATGTGCCATGCGTTTGTCCTGTAGCGTGAAGGAGGTCTCGCATATACATTGCTTTTGTACACCGGTAAAACTTTAACAGCATTCAGCTAGTTTTACGAATGGTGccatagaaaacaaaacagaaaatattaaatgcactgGTGTCAACTGTGAAAGCTACACGATGTCATTAGCAGTAAAAGTGCATGAAATATTAGAGCATTAGATTGAAGTGGATATCTCCATCGTTGTCCGCCGGATTCCTCTTTGTGTCTGAAAAAGTTTCATATGTGATATTGCAGCATGAGGACAGTTTAACAAGTTATTCTGAGATACTAGATATTGTGATGAATATTTTCATAACTTAGTGTTAAGTTTTTTGAATCGCTGGCTGGGTTTTAGGAGTGCACATAAGAATCAAagtgacatttacatttctgtatgaattgcaaattagatttaaataatcagtgctttcatttgaattaacttaatattttataggAATTTTCTACTTTGATTTTCGCTGCCATCGTAAGGTCAGCTTGATTGAGATATGCTTTGtgagcattatttatttattttcagcataacttatttatacattatttattaatgtatgcCATAGCACAGATctattttttgaagaaaatgagTCGTGAATGATTTTGGATGTGTACACAAATTTGCAATGTtcacaaaaaaagtgcaaaatcaCTGTGGCTGGATTTAAACAGAATGCTACATATGACCATTGTTTCCTGTGTGTGGCCTTTACAGTAGTAGTATCTACAGACAATGTGTGAccaataaatgatatttattgaaa

Function

NR:

description
PREDICTED: protein lifeguard 2-like

GO: NA

KEGG:

id description
K24205 TMBIM, LFG; protein lifeguard

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224161.1 True 2192 mRNA 0.41 12 14564464 14569658

Neighbor

gene id symbol gene type direction distance location
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding downstream 664 14554814 ~ 14563800 (-)
lrp1ab lrp1,lrp1ab,LOC107673053,LOC107593902,LOC108425568 coding downstream 39828 14428972 ~ 14524636 (-)
idh3g idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561 coding downstream 270898 14286961 ~ 14293566 (-)
avpr2aa avpr2aa,LOC107591070,LOC107737524,LOC107687451,LOC107716149,LOC107673055,LOC108436342 coding downstream 292004 14257850 ~ 14272460 (-)
syt6a syt6a,syt6,LOC107673111,LOC107591076,LOC107593918,LOC108433426,LOC107737664 coding downstream 367777 14150523 ~ 14196687 (-)
ada ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842 coding upstream 54595 14624253 ~ 14636325 (-)
gdi1 gdi1,LOC107564645,LOC107737502,LOC107673075,LOC107716167,LOC107574690 coding upstream 102619 14672277 ~ 14679231 (-)
LOC122329128 LOC107737536,LOC107673093,LOC107716130,LOC107591120,LOC107687434 coding upstream 148087 14717745 ~ 14724225 (-)
LOC122328919 kcnn3,LOC107723559,LOC107657645,LOC107699550,LOC107714686,LOC107595057,LOC108280396 coding upstream 202433 14772091 ~ 14808777 (-)
LOC122328901 LOC107549209,LOC107689901,LOC107738870,LOC107681562 coding upstream 336178 14905836 ~ 14933006 (-)
G157906 NA non-coding downstream 103447 14326384 ~ 14461017 (-)
G157928 NA non-coding downstream 121013 14383738 ~ 14443451 (-)
G157920 NA non-coding downstream 196835 14366559 ~ 14367629 (-)
G157915 LOC107673099,LOC107737518 non-coding downstream 205434 14357040 ~ 14359030 (-)
G157901 NA non-coding downstream 221194 14302872 ~ 14343270 (-)
G157966 mef2d non-coding upstream 81766 14651424 ~ 14729662 (-)
LOC122328920 NA non-coding upstream 260606 14830264 ~ 14830849 (-)
G157999 itga8,LOC107689880,LOC107717802,LOC107681583 non-coding upstream 266703 14836361 ~ 14845678 (-)
LOC122328921 NA non-coding upstream 618490 15188148 ~ 15189638 (-)
G158014 NA non-coding upstream 632708 15202366 ~ 15203950 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other downstream 233680 14326966 ~ 14330784 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 331413 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1282137 13280256 ~ 13282327 (-)
G157367 NA other downstream 1347056 13141078 ~ 13217408 (-)
G156985 NA other downstream 2639814 11922844 ~ 11924650 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 689 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 115232 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 477494 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 777759 15347417 ~ 15474390 (-)
LOC122329227 NA other upstream 1052284 15621942 ~ 15717250 (-)

Expression


Co-expression Network