atp13a2 (LOC107737536,LOC107673093,LOC107716130,LOC107687434)


Basic Information

Item Value
gene id atp13a2
gene name LOC107737536,LOC107673093,LOC107716130,LOC107687434
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14013247 ~ 14025526 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224162.1
TTACAAAAGATCGTAAAGGAAGAAAGGCCATGGCGTCACGTTCAGAGAGCTGACACTTGAATCCCAAACCGCTTCTTCGGTCATGTGTGATACAAATGATGTCCCTAGATTAAAAGCATGGGCCTTAGCGCTCACGTTATAGTGCATAAATGGATTCACCGGGTATGGGGAGCTGTGGTCCGGGGCTGGATGGGGTGACCTCCCCAGACACAGAACCCCTCATAAAGGATCCAAGACCCGAGGAGCTCGGTGACGTCTCGCATATGGATGTTCAGGGGTACAGATGGGTGTGCTGGAGGGTGTGGTTGTGCCGTATTGGGGCGGTGTGTTCTTTAGGCCTGCTCTTAGTGCTCTTCAACTGGCGCCCTCgcctcggcatcctggcccgctGCAAATCCTGTCCTGTCTCATTGGcagatgttttactgttaaagGACCGATATGGACAGCAGTTCGTTGTAGATGTGCTTACTGAGGAGATTGAGGAAGGCAGTTTGGAGCTGGCAGTAGGAGAAGTGGATGAGAATGAATGGAGAGACACTGTACAGCTGCACAGTGAAAAGAAAACATTGCTCAGATACTATATTTTTGAGGGCATGCGCTACATATGGATTGCCAGAAAAGGATCCTTTTGCAAAGCAAGCATTCTCAGTGAAGGTTGGACTTGCGCTGACCTGCATGGCCGACAGCAAGGACTGAGTAAAGCAGACCAGAGCACAAGAAAGCAGATTTTTGGGGCCAATATCATCGACGTACCTGTGAAGTCTTATTTACAACTTCTCTTTGAGGAGgttctcAATCCGTTCTACATATTTCAGGTGTTCAGCATCATTCTGTGGATGTCAGACAGATACTATTATTATGCCGCTTGCATCCTAATCATATCCTTAATTTCAATCGGCGTGTCCCTTTATGAGATCCGTaagCAAAGCACCACTCTTCGCCGCATGGCTCAGCTGATTGTGAACGTGACCGTACGCAGAGACACGGGAGAGGAAGAGTGTTTGAGTTCTGAGGAGCTGGTTCCAGGGGACTGTATTGTGATTCCAGCCGAGGGCTTGCTTCTGCCCTGCGACGCTGCCCTGCTGGCAGGGGAGTGCATGGTGAATGAAAGCATGCTGACTGGTGAGAGCATACCAGTGATGAAGATGCCATTGTCTGTGTCTGAAGCCGCGTACAGTCCAGAGTCTCAACGCAGACACACTTTGTTTTGTGGCACACAGCTCATCCAAGCCAAAGGAGGCAGGTCTGCTGGGAATGGGGCTGTTGCTGTTGTAACACGAACAGGGTTTTTTACTGCCAAAGGAGATCTTATTAGCTCTATCCTTTACCCTCAGCCATTAGACTTTCGCTTCTACAAGGATGCTATGAAGTTCCTACTATTTCTAGGACTTATGGCTCTGATCGGCACTATTTATAGCATTGTGATACTTTCAAAGAGCAATACAAACTGGCAGGACCTAGTCATCCGGTCTCTGGATATTGTGACAATAATAGTTCCACCTGCTCTTCCTGCTGCTTTAACTACAGCCACTATCTACGCCCAGAATCGGCTGAAGCGTCACGGGGTGTTCTGCATCAGCCCACCTCGCATTAATATCTGTGGCAAGACATCACTTTTCTGTTTTGATAAGACCGGCACTCTTACAGAGGAGGGTCTAGATGTGTGGGGCGTGATGGAAGTGAGTGGAGCAGTATTTAGTGAGTTGGTCCCTGACCCTCTTTTTCTCCCTCCTGGACTGATGCTCTCTGCACTTGCCTCCTGCCATTGTTTGGCTTTGCTGGGGGGTCAAGCGCTCGGAGACCCACTGGAGCTCAAAATGATAGAATCTACTGGATGGGAACTGACAGAGCCAGAGAATGAGATGGCACTTGATTCTGAATTTGGCAAACACAGAGTGCTAGCAGTGATGAGACCTCCTGCATCTGACCTCCTGTCACAAGGAAATTCTGTCAGTCAGCCAGTGGCGATCATACGGCGATTCCCATTTTCCTCTTCTTTGCAAAGGATGAGTGTTGTGACCGTGGGTCCAGGTGGAGCGTCTCCTGTGGCGTTCCTTAAAGGAGCACCTGAAATAGTTGCCAGCTTGTGCCTTAGAGAAAGTGTGCCATCTCATTTTTCACCCATTCTCCGGGAGTATGCCAGCCAGGGCTTCAGGGTACTTGGATTTGCCTACAAGCATCTCACTAAGGAGACTAACCTAAGCACTGTCGAAAGGGTGGAGGTGGAGAAAAACATGAGCTTCCTGGGCCTGTTAGTAATGAAGAACCAGGTGAAGCCAGAGAGCGCAGAAGTCATTCGCACACTTAAACTGGCACAATTACGGCCTGTTATGGTTACAGGTGACAATATTCTCACGGCTGTGAATGTAGCACGTGCGTGTGGAATGGTGCCGTCACATGAGAAGGTTATTTTTGTTCACGCATCGCCCCCTACCGCCAGTCCAATGGCCTCGCTGCAGTTTCATCAAGGAGATGGTGCAGTAACCACCATTAATACTCAGGAGGCTATTGATATTCCAGCGCAGGATCTCTACCAAAACGGTGCCGGCTATCATTTGGCTATAAATGGAATGTCCTTTGCAGCACTTTGTGATCATTTCCCTGAATATCTGCCCAAGATTCTGATGAGGGGAACCGTGTACGCCCGCATGACCCCAGACCAGAAAACCCAGCTGGTCAAAGCACTGCAGAAACTCAATTACAGGGTGGGCATGTGTGGCGATGGAGCCAATGACTGCGGAGCACTGAGGGCCGCTGATGTGGGTGTGTCGTTGTCTGAGGCTGAGGCGTCTGTGGCGTCTCCTTTCACATCCAAGTCTAACAACATTAGCTGCGTGCCTCTACTCATCAAgGAAGGCAGGTGTTCACTGGTGACATCATTCAGTCTTTTCAAGTACATGGCTTTGTACAGCCTGATCCAGTTTGCCTCTGTACTTATTCTCTACACTGAGAAAACAAACTTGGGAGACTTGCAGTTCCTCTTCTTTGATTTGGTTTTGGTGACCGTTTTGGCTATAGTGATGGGACGGGGAGGTCCCAGCGATGAGCTCCACCCCCGGCGACCCGCTGCCAGTCTTCTGTCTCTCCCAGTCCTGTCTACTTTACTGCTGCACACCGTGCTGCTGATCCTAGCCCAGGTGTCTGCCCTGCTTATCACTGTATCACAAGACTGGTATGTGCCTCTAAATTCCACTGTGACGGGGGCTGCGAACTTGCCCAACATGGAGGACACAAGCGTATTTGCCTTATCGGGATTCCAGTACATCATCATGTCTGTTGTGATAACCAAAGGATATCCTTACAAAAAACCACTGTATTACAATTTTTTGTTTGTAGGTGCTCTGCTGGTCTTCTTTGCGCTTATGAGCTGGCTGGTCCTTTTTCGTCACACCATCATCCATCAAGTCCTGCAGCTCTATGACATCAACGATATGAAGTATAAACTGTTGCTGGTGGCTGTAGCTGCGCTCAACTTCTTCATATGCTACATGCTCGAGTTTCTTATTGACCAAGGAGCCCTGAACTGCCTTCGCAACCCCAGAGGAAAACGCAAGTCCAAAAAGCAGTACAAACGCTTGGACGTAGAGCTCGCAGAAACGCCCTCATGGCCGCCTCTAAACCAACCCTTGTTTCCAACACAGTGCTCCGTCATCGGTGTTAGCTAACACCTACCTCCTGCTTTACAATTTCAGCTCTTCCGAATCAAATATCCAGGGTTGCCAAAGATCTGATACCACCTCTCGGTGCACTAGTGAGGTATGAGTAGCAGGTGTTGTCCTTGTCTGCCTATTATATATGGCACAAAACTCATCATGCAGCATTAAGAATGAACTGTTTGTGATGGTATTTctaatataaaacatgaatgaagAATAAAAACCTTGAAGTATTTTGAAA

Function

NR:

description
cation-transporting ATPase 13A2 isoform X1

GO:

id name namespace
GO:0007626 locomotory behavior biological_process
GO:0006812 cation transport biological_process
GO:0009790 embryo development biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0019829 ATPase-coupled cation transmembrane transporter activity molecular_function

KEGG:

id description
K13526 ATP13A2; cation-transporting P-type ATPase 13A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224162.1 True 3900 mRNA 0.49 30 14013247 14025526

Neighbor

gene id symbol gene type direction distance location
sult1st5 LOC107591081,LOC107673112,LOC107737538 coding downstream 5512 14002436 ~ 14007735 (-)
tmem82 tmem82,LOC107737537,LOC107593928,LOC107673057,LOC107716128,LOC107580573,LOC107687464 coding downstream 10562 13999885 ~ 14002685 (-)
spen spen,LOC107737540,LOC107591084,LOC107687431,LOC107716126,LOC107593929 coding downstream 13675 13968518 ~ 13999572 (-)
epha2b epha2b,epha2,LOC107591085,LOC107737541,LOC107673100,LOC107687430,LOC107716125,LOC107593930 coding downstream 57692 13932988 ~ 13955555 (-)
fam131c fam131c,LOC107737545,LOC107673113,LOC107577560,LOC107687483,LOC107716124,LOC107593947,LOC107591121 coding downstream 89766 13912555 ~ 13923481 (-)
LOC122328469 sdhb,LOC107673094,LOC107593926,LOC107591143,LOC103467007 coding upstream 108 14025634 ~ 14029168 (-)
tmem240a tmem240a,tmem240,LOC108275582,LOC107593924,LOC107687438,LOC107673083,LOC105898995 coding upstream 6200 14031726 ~ 14040078 (-)
ctdsp2 ctdsp2,LOC107593922,LOC107716136,LOC107673073,LOC107687442 coding upstream 60060 14085586 ~ 14094436 (-)
sdf4 sdf4,LOC107591077,LOC107673072,LOC107716138,LOC107687443,LOC107593920 coding upstream 74871 14100397 ~ 14104226 (-)
syt6a syt6a,syt6,LOC107673111,LOC107591076,LOC107593918,LOC108433426,LOC107737664 coding upstream 124997 14150523 ~ 14196687 (-)
G157826 NA non-coding downstream 187658 13823993 ~ 13825589 (-)
G157813 NA non-coding downstream 239939 13772775 ~ 13773308 (-)
G157799 NA non-coding downstream 266076 13742257 ~ 13747171 (-)
G157765 NA non-coding downstream 577386 13433755 ~ 13435861 (-)
G157365 NA non-coding downstream 891221 13121813 ~ 13122026 (-)
G157863 NA non-coding upstream 32311 14057837 ~ 14075937 (-)
G157874 NA non-coding upstream 116413 14141939 ~ 14142168 (-)
G157875 LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444 non-coding upstream 118136 14143662 ~ 14143930 (-)
G157880 NA non-coding upstream 210826 14236352 ~ 14237014 (-)
G157885 NA non-coding upstream 217055 14242581 ~ 14243955 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 730920 13280256 ~ 13282327 (-)
G157367 NA other downstream 795839 13141078 ~ 13217408 (-)
G156985 NA other downstream 2088597 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 2155279 11763709 ~ 11857968 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 197283 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 301440 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 544821 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 659364 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 1021626 15047152 ~ 15048344 (-)

Expression


Co-expression Network