LOC122328487 (LOC107717767,LOC107687461)


Basic Information

Item Value
gene id LOC122328487
gene name LOC107717767,LOC107687461
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12936321 ~ 12940885 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224194.1
CCCATCTATTGTTACAGAGAGTCTCTCCGGTCTAGCCACCGAGCGTCAGTCTCTTATTCATCAggaataatattttgtataagaACCCTGCTGAGAGGAGGGAATAGAGAACAAAGTGACAACAAAAAGTAGACTCGGAGATGTCAGGACTCCCCACGAGCCTGGGGAATAACTGTGACAAGGCAATGTTGTTCTTCCTCTTGTTCTCCTTGCTGTCCCCCCTGGTGGCATTGTACGCAGAATACTCTGGGCATCACAGTTTGATCATATATGTAACGTTCGCTCCTGGACATCAATATTTACCTACATACTCTTCATATGGCATGCTTGATGATTATAGAGTATTTACTTTTGATAGCACCTCCGATGTATTTTCACATCCCTTTGGCCGTGTGGAATCTCTGTCCACTGTCTGGAGAGATCTCAAGGATTGCACAAACTTTAAAACAGGCTATTTAAACCTGTTTTCAAGATATGCTAATTTAACCTTGGGGTTGAAAGgTCCACTCTTGCAGTTAATGTATGGCTGTCAGCTGAGTCATAATGGAACGTCAAGGGGACTGTATTCTTTTTCAGTCAACGGGGACTACAGTCTTTCTATGGACATGGACAGCCCTCATTGGTACTCATACTTGCCCCAAGATCTGGACATTAAACACATTCTAGACAGGTTTGATCTCTGGAATCACAACAATCTCATATACATTCATCGTGATTGTGTTCCTCGACTCAAGAAGTTCTACGAACACAGTAGAACTATGCTTGACCAGAAAGTTCGCCCCGAAGCTGTGATCAGGCACAAGCCTGCTGGAGCTCTTAACTGTGTGGTGACAGGCTTTTACCCTAAAGATATCACCGTGGAGTGGATAGTTAATGGACAGCCAGCCTTAGATGGGATATCAACAGGCTTCCTACCAAATCATGACCAAACATACCAAGTTCAGGTGGCAATTCTCCTATCTGAGACTACACACAACTACACCTGTCAAATAAAGCACAGCAGCCTCCAAGAGCCGATGGTCGTTACGTGGGATGCTTCCTCCACTATGACAGATGTAAAAATGTCTCTTCTTATCGGACTTATAGCAGGACTTATCGCAGCGTTTACACTAACTGTTGTTCTTATGTGTTTCATATTTAAGTGtgtaatttggaaaaaaaaatctatatttgtaatgtaagtgtacattttattattttaattatattaaatctaTTACCGTCATCCTTAactccaataaataaatatatttatatgataaacattatatttctacattattttttattttgtaattaatgttattaaatagtTTGGTTAGTTTATTACTTATTTGAGACTGTCTcgttattatcatttattttgctaCTTTGATCTTGATATATGTACGTAAAAAAAGAATCAGAACCTATTCGATTTCACATGTTAATctttgaaatgcatatttagaTTCACCAAGACAAAtgagattttatgttttatttatgttaagaTTTGATAAAACGTCTGTTCTATTAAAGTGTCTTCTCTGCCTGACTGGATTATATAACAAAGCATGTCAAATTAAGTTTGTTCCATTAACTGCAGCGTCACTACTTTTGCACGTTAGAGAACATGCATAAAAAGGGTTGGGATCATGTGATCCGATCTGATCATCAAGCATAGAAATGTGAATATCAACTGATGTGTGATG
>XM_043224195.1
CCCATCTATTGTTACAGAGAGTCTCTCCGGTCTAGCCACCGAGCGTCAGTCTCTTATTCATCAggaataatattttgtataagaACCCTGCTGAGAGGAGGGAATAGAGAACAAAGTGACAACAAAAAGTAGACTCGGAGATGTCAGGACTCCCCACGAGCCTGGGGAATAACTGTGACAAGGCAATGTTGTTCTTCCTCTTGaCAGTTGAATCAACCTCAGTGTTATCAGTATAGGGATGTCTCACGTGAAAAAATTACCCGATTTTGTTCTCCTTGCTGTCCCCCCTGGTGGCATTGTACGCAGAATACTCTGGGCATCACAGTTTGATCATATATGTAACGTTCGCTCCTGGACATCAATATTTACCTACATACTCTTCATATGGCATGCTTGATGATTATAGAGTATTTACTTTTGATAGCACCTCCGATGTATTTTCACATCCCTTTGGCCGTGTGGAATCTCTGTCCACTGTCTGGAGAGATCTCAAGGATTGCACAAACTTTAAAACAGGCTATTTAAACCTGTTTTCAAGATATGCTAATTTAACCTTGGGGTTGAAAGgTCCACTCTTGCAGTTAATGTATGGCTGTCAGCTGAGTCATAATGGAACGTCAAGGGGACTGTATTCTTTTTCAGTCAACGGGGACTACAGTCTTTCTATGGACATGGACAGCCCTCATTGGTACTCATACTTGCCCCAAGATCTGGACATTAAACACATTCTAGACAGGTTTGATCTCTGGAATCACAACAATCTCATATACATTCATCGTGATTGTGTTCCTCGACTCAAGAAGTTCTACGAACACAGTAGAACTATGCTTGACCAGAAAGTTCGCCCCGAAGCTGTGATCAGGCACAAGCCTGCTGGAGCTCTTAACTGTGTGGTGACAGGCTTTTACCCTAAAGATATCACCGTGGAGTGGATAGTTAATGGACAGCCAGCCTTAGATGGGATATCAACAGGCTTCCTACCAAATCATGACCAAACATACCAAGTTCAGGTGGCAATTCTCCTATCTGAGACTACACACAACTACACCTGTCAAATAAAGCACAGCAGCCTCCAAGAGCCGATGGTCGTTACGTGGGATGCTTCCTCCACTATGACAGATGTAAAAATGTCTCTTCTTATCGGACTTATAGCAGGACTTATCGCAGCGTTTACACTAACTGTTGTTCTTATGTGTTTCATATTTAAGTGtgtaatttggaaaaaaaaatctatatttgtaatgtaagtgtacattttattattttaattatattaaatctaTTACCGTCATCCTTAactccaataaataaatatatttatatgataaacattatatttctacattattttttattttgtaattaatgttattaaatagtTTGGTTAGTTTATTACTTATTTGAGACTGTCTcgttattatcatttattttgctaCTTTGATCTTGATATATGTACGTAAAAAAAGAATCAGAACCTATTCGATTTCACATGTTAATctttgaaatgcatatttagaTTCACCAAGACAAAtgagattttatgttttatttatgttaagaTTTGATAAAACGTCTGTTCTATTAAAGTGTCTTCTCTGCCTGACTGGATTATATAACAAAGCATGTCAAATTAAGTTTGTTCCATTAACTGCAGCGTCACTACTTTTGCACGTTAGAGAACATGCATAAAAAGGGTTGGGATCATGTGATCCGATCTGATCATCAAGCATAGAAATGTGAATATCAACTGATGTGTGATG

Function

NR:

description
PREDICTED: hereditary hemochromatosis protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224194.1 False 1694 mRNA 0.38 6 12936321 12940885
XM_043224195.1 True 1760 mRNA 0.38 7 12936321 12940885

Neighbor

gene id symbol gene type direction distance location
LOC122328520 LOC107591107,LOC107703065,LOC107737567,LOC107717766,LOC107593370 coding downstream 5508 12911070 ~ 12930813 (-)
phc2a LOC107737567,LOC107591107,LOC107703065,LOC107717766,LOC107593370 coding downstream 125752 12771790 ~ 12810569 (-)
ephb2a LOC107703068,LOC107593373,LOC107687404 coding downstream 211270 12674819 ~ 12725051 (-)
lrrc38a LOC107703049,LOC107737569,LOC107591108,LOC107712669,LOC107687405 coding downstream 262502 12665001 ~ 12673819 (-)
vps13d vps13d,LOC107703069,LOC107687459,LOC107712684 coding downstream 275189 12622070 ~ 12661132 (-)
spsb1 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC103042472,LOC107591103,LOC107737563 coding upstream 126442 13067327 ~ 13080224 (-)
ca6 ca6,LOC107737562,LOC107703061,LOC107591102,LOC107687477,LOC107593430 coding upstream 182563 13123448 ~ 13128638 (-)
noc2l noc2l,LOC107737559,LOC107687416,LOC107716108,LOC107703058 coding upstream 435559 13376444 ~ 13401670 (-)
LOC122328822 LOC107703053,LOC107737553,LOC107687419,LOC107591147 coding upstream 495657 13436542 ~ 13442457 (-)
her9 her9,LOC107716081,LOC107593950,LOC107687478,LOC107737700,LOC107591146,LOC107703052 coding upstream 552696 13493581 ~ 13495390 (-)
G157298 NA non-coding downstream 80469 12854297 ~ 12855852 (-)
G157295 NA non-coding downstream 82820 12853239 ~ 12853501 (-)
G157255 NA non-coding downstream 316264 12619019 ~ 12620057 (-)
G157224 NA non-coding downstream 402342 12533758 ~ 12533979 (-)
G157222 NA non-coding downstream 406828 12524479 ~ 12529493 (-)
G157349 NA non-coding upstream 88981 13029866 ~ 13040397 (-)
G157353 NA non-coding upstream 122769 13063654 ~ 13063904 (-)
G157357 NA non-coding upstream 162226 13103111 ~ 13103551 (-)
G157355 NA non-coding upstream 164876 13105761 ~ 13107193 (-)
G157360 NA non-coding upstream 175025 13115910 ~ 13116131 (-)
G156985 NA other downstream 1011671 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 1078353 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 1134689 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 1189701 11741400 ~ 11746620 (-)
G157367 NA other upstream 200193 13141078 ~ 13217408 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 339371 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 1281924 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 1386081 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 1629462 14570347 ~ 14589622 (-)

Expression


Co-expression Network