esyt1a (esyt1a,LOC107737514,LOC107673110,LOC107591117,LOC107716156,LOC107593905,LOC107668346)


Basic Information

Item Value
gene id esyt1a
gene name esyt1a,LOC107737514,LOC107673110,LOC107591117,LOC107716156,LOC107593905,LOC107668346
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14375593 ~ 14390509 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224199.1
ATCTTTTAAGCAAACTAGAAATGCACAACTTTCCGCTGCAAAGGAACAGACGTACGCGCCGTTTTAGTCGAGCGAGCGAAGTATGAgtcgtgtttttgtttttgtttagtcttCAGCGTACAGCACCCCTTCGCTTCCAGCGGTACTGAGCGGGTTTCTGGAGAGCAGGTCGGAACCGCTCGCGGAGGACGGGGTTTGATGCAGAAAGAGCCGATGTCATCTGAGGATGCGGGGCCGAGCGCGGGTGCCCCTCCGGAGGCTGCGGACTCGGCCCTGCCGCACGCCTCCGCTGGAAAACACGCCGTGTCCGTCCTCTGGTCCTTTGGAAAGTGCGTCGGTGCCTTATTGCCGGTCTACCTGGCTGGATATTTCGGATTCagcatttgtttagttttgctcGGTCTCCTGGTTTACATGGGATGGAAACAAAGTCGCGATGGAAAACGAGCCCGGCTGCAAAGCGCGATGTATTTTTTAGAGAATGAGCAGGATGTGACCACTACACGGGTGTTTAGAAGTAAACGGGAGTTACCGGCATGGGTGAACTTTCCTGACGTGGAAAAGGTGGAGTGGATGAACAAGATATTGCAGCAGGCCTGGCCGTTTATTGGACAGTATCTGGAGAAGCTGCTGGTGGAGACTATTGCCCCTTCGATCCGAACTGCCAGCGCTCATCTGCAAACTCTCAGCTTCACCAAAGTTGACCTGGGCGATAGGGCTGTGAAGGTAGTTGGGGTGAAGGCCTACACTGAGCATGATAAACGTCAGGTGATACTGGATCTTTATATCAGTTATGCTGGAGATGTGGAGATTAACGTTGAGGTGAAGAAGTACTTCTGTAAAGCTGGAGTGAAAGGCATTCAGCTCCATGGAAAGTTGAGGGTGATCTTGGAACCTCTAATTGGAGACGTTCCTCTCGTTGGAGCCATCACCATGTTTTTCATTCGCAGACCAAAACTCGACATCAACTGGACTGGCTTGACCAATTTGTTAGACATACCTGGTTTGAATGCCATGTCGGACACTATGATAATGGATGCAATCGCCTCTTTCCTGGTTCTTCCCAATCGTCTCACTGTGCCTTTGGTGGCCAATCTGCACGTAGCACAGCTGCGTTCCCCTCTCCCACGGGGTATAGTGCGTATCCACTTGCTGGAGGCAGAAAACCTTACTGCCAAAGATAACTACATGAAAGGTGTGATATCTGGGAAGTCTGACCCATATGCAGTGCTCCGAGTGGGCACGCAGACCTTCACCTCCCACCATGTGGACAACAACCTTAATCCTCAATGGAGGGAGATGTACGAGGTCATTGTTCATGAAGTACCCGGTCAGGAGCTGGAGCTGGAGGTGTTTGATAAAGATCCCGACCAGGATGACTTTCTTGGGagAATGAAGCTGGATTTAGGTATTGTAAAGAGCGTTCTTTTGGATGAGTGGTACACTTTAAAGGACGCACCATCAGGTCAGGTTCATCTCAAGCTAGAATGGCTCTCTCTGCTCCCCTCTGCAGAGCGCCTAAGCGAAGTGCTGGAgaggaataaaaacattacaatatatgGAAAGACAGCAGATCCTCCTTCTGCTGCTATTTTGACAGTTTATCTTGACCGGGCAAAAGATCTACCTTTTAAGAAAGGCAACAAGGACCCCAGCCCCATGGTGCAGATTTCTGTCCAGGATACCACCAAAGAAAGCAGGACGGTGTATGGGACTAACAATCCAGTATGGGaagatgcatttacattttttattcaggaCCCACGCAAACAAGATATCGACATCCAGGTGAAGGATGATGACAGGGCTTTGACTCTGGGGAGTTTGTCTGTCCCTTTGTCCCGTCTGCTCTCCAGTGCTGAGCTCAGCATGGATCAATGGTTTCAGCTAGAAAAGTCCGGACCAGCCAGCCGTATCTacatcacagctatgctgaggGTGCTGTGGCTGAATGAAGAAGCCATCCTTACCACACCTGTGACTCCGTTACCCGGAGATGGAGATATTGAAGCAGAAGTGTCTTCAGGGGTTTCAAAATTAATCCCTGTTTCAAAACGTCCCGAGCACACTAGTCCAGACAGCAGTTTTGCATCTGAGGGTGTTCTGCGGATCCACCTGTTAGAAGCCCAGAATCTCATTGCTAAGGACAATATAATGGGTGGGATTGTAAAGGGAAAGAGTGACCCGTATGTGAAGATCCGAGTAGGAGGACTGGCATTCAAGAGTCAGGTCATCAAAGAGAACCTCAACCCCATCTGGAATGAACTTTATGAGGTGATCTTGACCCAGCTGCCAGGTCAGGAGGTGGAGTTTGATCTTTATGATAAAGACATTGATCAGGACGACTTCCTTGGCAGGGTTAAAGTGAGTCTCAGAGAACTCATCAGCTCTCAGTTTACTGATCAGTGGTATACTCTGAATGATGTGAAGTCTGGACGAGTTCATCTTGTGTTGGAATGGGTGCCTAAAGTTTCAGATCCCAACAGACTTGAACAGATCCTACGTTACAATTATCGTCAGTCTTACCTGAATAAAACGGTTCCTTCCGCTGCTCTGCTTTCTGTGTATGTTGAGAGAGCACATGGTCTGCCTTTAAAAAAGAGCGGAAAGGAGCCGAAAGCAGGAGCAGAATTGTGCCTCAAAAATGTGTTCTACCGGACCAAAGTTGTCAATAGCTCAACTTCTCCACAGTGGGATGAAGCTTTTCATTTCCTGATTCATAATCCAAGAGAAGACACACTTATAGTCAAActcTCTCACAGCTGGGGTCAGGCTCTGGGCTCTCTTGTGCTTCCTGTGAAGGAGCTGATAGATGAGAAGGATCTAGTGATGGACCGTTGGTTCAGTCTGGATGGAGCCATGCCTGAAAGTCAGATTCTGCTGAGAGCTGAACTCAAGCTCCTAGACAGCAAGTTGGCTCAGTGTAGCGATGCGGAGGATTCAAGTCACATCATCTCTACTGGAGACGAAGCTGCTGCAGGCAATCGTGAGCTCCGACACAGAAGTGTGCCCACCCAAGGAGGTGAGGATGCAGATTCAACCGGGAAGGCCCAGGTGAAGCTTTCTGTTGTGTATTCATCTGAGGAGAACCGACTTGTCATTACTGTCCATGCCTGCAGGAACTTGCCATCCTACTCCAAGGATCCTCCAGACACGTACATCTCCTTTATTTTACTTCCGGACAAGAACCGGATCACCAAAAGAAAGACCACTATTAAGAAGAAAAGCCTCAAACCTGAGTTCAATGAGAGATTTGATTTTGACATGTCACATGAAGAAGCTAAGCAGAAACATCTTGAAGTGTCTGTCAAGAACAGCGTTTCCTTCATGAGTCGTGAAAAAGAGCTTCTTGGCAAGCTTCTGATAGATCTGAGTCAGCTGGATCTCAAAGCAGCAGTATCACAGTGGTACAGCTTGTCACATGAGACCAACTGACTGACCGTCCTTCCCATGTTGACTTCATTTGCAATCATTCATAGTGGAGCCTGATTTCACAGATGTTCTCCTGACACTAGCAGAGGGTCCTAGAGCCGGGCGTCAGGATAAAGATTGCATCATGTAACCGCTGTGCAACTAGCTTTCGCACAAAAAATATAGCCTGCTTGATTTCCATCTTAAACAAATGATGTTAGCACAAGAAGGCTATGAGGGCACCACCTTGAGTCAACTCGGCAGCTGTTggagaaatgttacattttttaaagtatttgtaGCTTTTTAGCTCCTGCACTTTATGGGTCATTGAGAATGCAGCGGTGAGAAGTCAGAGCTTCTGTTCAGCAgtgtttattgcatttcattCCCCAAAAAAATAGTTGTGGAGTTGATTATTTCCAAATGAATCCACATCATGCATTTCAAAATCACCAAAttgctatatattattattatgattttttttttaagaaagcctATCAAGAACgaatcattttatattgtttcctcttttaatatctaataagggtttagatattatttaaacatttcttgtaTCGTTGGTTTCCATATTTTAGCCTCATGTTTGTAACTAGACTATTCATTTTACACATATCAAAAAACGTGTTGATCACTGTGCAAAGTGAGTACCTTCccaaagatttaaaatatattttatgtgtgtatgttttaacCATAGACTGTAACGAAGGTTCAAACCAAAAGGCagcatgaatatttaaaatgtaagtgcCAATGAGTCGCTGAGAGACAGATGCTcaacaatgttacaaaaatgctTGAGTTGTGTCTTAAAGTACAGAATTAGTTCCTCGTGAGAAAGACAATTTTGACAGAAAACAGAGATGCTTTTGACGTTGAAATGTAGTGCTCCTGCACCCTGTTAACCAGAGCCTGTATCGccgttttaataaatatgccaTTTGCACTTtcaa

Function

symbol description
esyt1a Predicted to enable calcium ion binding activity and phospholipid binding activity. Predicted to act upstream of or within endoplasmic reticulum-plasma membrane tethering and lipid transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be extrinsic component of cytoplasmic side of plasma membrane and intrinsic component of endoplasmic reticulum membrane. Orthologous to human ESYT1 (extended synaptotagmin 1).

NR:

description
PREDICTED: extended synaptotagmin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224199.1 True 4391 mRNA 0.46 32 14375593 14390509

Neighbor

gene id symbol gene type direction distance location
pa2g4b pa2g4b,LOC107737517,LOC107593906,LOC107591063,LOC107668344,LOC107673109,LOC107716155 coding upstream 3700 14366558 ~ 14371893 (+)
erbb3b LOC107673099,LOC107737518,LOC107668345,LOC107593907,LOC107716154 coding upstream 9397 14345196 ~ 14366196 (+)
fam3a fam3a,LOC107673098,LOC107591069,LOC107737523,LOC107593911 coding upstream 77476 14293872 ~ 14298117 (+)
arhgap4a arhgap4a,LOC107737525,LOC107673101,LOC107591071,LOC107716143,LOC107687450,LOC107593913 coding upstream 117881 14246442 ~ 14257712 (+)
casp9 casp9,LOC107673102,LOC107737696,LOC107687452,LOC107716147,LOC107593914 coding upstream 129889 14240745 ~ 14245704 (+)
fmnl3 fmnl3,LOC107673105,LOC107737516,LOC107716159 coding downstream 306 14390815 ~ 14428183 (+)
LOC122328739 NA coding downstream 63197 14453706 ~ 14455543 (+)
rbms2b rbms2b,LOC107673067,LOC107737513,LOC107668341,LOC107716168,LOC108425569 coding downstream 140944 14531453 ~ 14554130 (+)
r3hdml LOC107673068,LOC107737693,LOC107568404,LOC107716065 coding downstream 181738 14572247 ~ 14580946 (+)
hnf4a hnf4a,LOC107673078,LOC107737506,LOC107568408,LOC107564652 coding downstream 190523 14581032 ~ 14598335 (+)
G157551 NA non-coding upstream 543 14373577 ~ 14375050 (+)
LOC122328961 NA non-coding upstream 101858 14264664 ~ 14273735 (+)
G157531 NA non-coding upstream 178897 14196431 ~ 14196696 (+)
G157521 NA non-coding upstream 227977 14147410 ~ 14147616 (+)
G157494 NA non-coding upstream 287074 14087581 ~ 14088519 (+)
G157608 NA non-coding downstream 173831 14564340 ~ 14566056 (+)
G157609 NA non-coding downstream 176010 14566519 ~ 14566730 (+)
G157610 NA non-coding downstream 176692 14567201 ~ 14568506 (+)
G157611 NA non-coding downstream 178623 14569132 ~ 14569509 (+)
G157624 NA non-coding downstream 237081 14627590 ~ 14629198 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other upstream 32319 14299701 ~ 14343274 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other upstream 249392 14094078 ~ 14126201 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 2123611 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 2629023 11697414 ~ 11746570 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 213284 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 219020 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 290351 14680860 ~ 14686618 (+)
LOC122328914 szrd1,LOC107673108,LOC107716129,LOC107737539,LOC107687433,LOC105899027 other downstream 321638 14712147 ~ 14714555 (+)
LOC122328907 mef2d,LOC107741762,LOC107549240,LOC107717782,LOC107597970,LOC107663114,LOC107689865 other downstream 335401 14725910 ~ 14758217 (+)

Expression


Co-expression Network