nmnat1 (nmnat1)


Basic Information

Item Value
gene id nmnat1
gene name nmnat1
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9023008 ~ 9026430 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224220.1
CGCGCGTTTTGCGTTTGCTCCACAGCACTGCTATCGCAACAATAACACAACTAAAATACGATTCATTTTAACAGCTTCTTCTTGTTTATAGTAAAGCGATATTTCGCTGCGTCGGTTGGTTAAACCAGTGCGTTGAGGTTTTACTGAAACCAAAGAATAATACAGAATACCCTAGAATAATCAAGGCGCTTTGTTGAAACATAAATGGGACTCACGAGACAAGTTTGTTGACAGCATTTTCTTGATCAATGTCATCACAAGAGAAACCCAAAGTGGTGCTGCTGGCATGTGGGTCCTTCAACCCCATCACAAACATGCACCTGCGTATGTTCGAACTGGCTAGGGATCACCTCGAAGACACTGGAAGATACAGAGTGGTGAAAGGCATAATCTCTCCAGTTGGAGACGGCTACAAAAAGAAAGGTCTGATTGAAGCCTGTCATCGGTTAGAGATGGCTAGACTAGCCACGCTGAACTCTGATTGGATCACAGTGGATGACTGGGAGAGCCAGCAGCCGGAGTGGGTGGAGACAGCCAAAGTAGTTCGGCACCATGCAGAATGCGTTTTCAGCGAGAACGACAACGACGATGTGGATACGGTGAGGTGTGGGAAGAGGAGAAAGctggaacaaaataaaatcatctcTCAAACCTCATCTTATATTAGCACAAAAGAAGACACCCCTCATCTGAACCTCCTGTGTGGTGCTGATGTGCTGGAGTCATTCGGTGTCCCCAACCTTTGGAAGCCAGAGGATATTGAGGAGATAGTGGGTCGCTATGGTGTGGCGTGCATCACCAGGTGCGGCAGTGACCCTGAGAAGTTTGTCAATCAGTCTGATGTGCTGTACAAACACCGTAAGAACATCCACATGGTTCGGGAATGGGTGACCAATGAGATCTCGGCCACCCATGTGCGCCGTGCCCTACGCAGGGGACAGAGTGTCCGCTACCTGCTGCCTGACCCCGTGCTGCGCTACATTCAGGATCACGGTCTGTACAGTGCTGAGAGCGAGCAGAAGAATGCTGATGCTATCCTCGCCCCTTTTCAGAGATACAGCACCTCTAATTAGACTGATGTTCTGCTGCTTTTCATCCAGTTTCTTATTCTGTTCGTGATCTCTGATGGAGGGCTGGTCTGTTTCCCACAGAACTTCACTGACACTTGATTGATGGTTAATTTTGCTTGCTTGAACTCATTTGGTTGTGAGCGATTGCTTTGGATTGTATCATGAAAGATTCAgattgataaataatatattaaaaatataatttcatttgatttaattgatttaatgctgtcaaatgattaatcacatccaacataaaagtttttgtttgcata

Function

symbol description
nmnat1 Predicted to enable nicotinamide-nucleotide adenylyltransferase activity and nicotinate-nucleotide adenylyltransferase activity. Predicted to be involved in NAD biosynthetic process. Predicted to act upstream of or within pyridine nucleotide biosynthetic process. Predicted to be active in nucleus. Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; heart; liver; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 9 and spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual developmental disorder, and Leber congenital amaurosis. Orthologous to human NMNAT1 (nicotinamide nucleotide adenylyltransferase 1).

NR:

description
PREDICTED: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1

GO:

id name namespace
GO:0009435 NAD biosynthetic process biological_process
GO:0000309 nicotinamide-nucleotide adenylyltransferase activity molecular_function

KEGG:

id description
K06210 NMNAT; nicotinamide mononucleotide adenylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224220.1 True 1345 mRNA 0.45 5 9023008 9026430

Neighbor

gene id symbol gene type direction distance location
LOC122328502 rbp7a,nmnat1-rbp7a,LOC107708837,LOC107681992,LOC107695774,LOC107586559,LOC107580544 coding downstream 1927 9019526 ~ 9021081 (-)
ube4b ube4b,LOC107570768,LOC107681967,LOC107718816,LOC107586519,LOC107695775 coding downstream 4026 8999326 ~ 9018982 (-)
kif1b kif1b,LOC107681965,LOC107695777,LOC107716234,LOC106522667 coding downstream 25502 8934480 ~ 8997506 (-)
pgd pgd,LOC107681986,LOC107586524,LOC107716232,LOC107695776,LOC107570752,LOC107708839 coding downstream 89429 8927503 ~ 8933579 (-)
casz1 casz1,LOC107708843,LOC107586525 coding downstream 245750 8699825 ~ 8777258 (-)
clstn1 clstn1,LOC107718806,LOC107681971 coding upstream 3290 9029720 ~ 9062901 (-)
pik3cd pik3cd,LOC107708832,LOC107718809,LOC107681979,LOC107695767 coding upstream 72843 9099273 ~ 9118072 (-)
foxl2l zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 coding upstream 94442 9120872 ~ 9122731 (-)
tmem201 tmem201,LOC107681977,LOC107695766,LOC107718817 coding upstream 97570 9124000 ~ 9135259 (-)
slc25a33 slc25a33,LOC107708828,LOC107695765,LOC107681985 coding upstream 108985 9135415 ~ 9142320 (-)
G155933 NA non-coding downstream 393905 8628699 ~ 8629103 (-)
G155825 NA non-coding downstream 397366 8624926 ~ 8625642 (-)
G155803 NA non-coding downstream 490081 8526402 ~ 8532927 (-)
G155759 NA non-coding downstream 640401 8307279 ~ 8382607 (-)
G155737 NA non-coding downstream 845490 8176699 ~ 8177518 (-)
LOC122329247 NA non-coding upstream 43954 9070384 ~ 9072944 (-)
G155968 NA non-coding upstream 126650 9153080 ~ 9153502 (-)
G155979 NA non-coding upstream 162083 9188513 ~ 9188897 (-)
G156051 LOC107708813,LOC107656547,LOC107571009,LOC107756377 non-coding upstream 575532 9601962 ~ 9602477 (-)
G156054 NA non-coding upstream 581058 9607488 ~ 9607948 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 96257 8921564 ~ 8926751 (-)
c23h1orf127 LOC107708840,LOC107570680 other downstream 103238 8913062 ~ 8919770 (-)
G155827 NA other downstream 394617 8625758 ~ 8628391 (-)
G155807 NA other downstream 471031 8545394 ~ 8551977 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other downstream 1744685 7276448 ~ 7278323 (-)
ctnnbip1 ctnnbip1 other upstream 53102 9079532 ~ 9097302 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other upstream 168880 9195310 ~ 9209964 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other upstream 775355 9801785 ~ 9808369 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other upstream 805379 9831809 ~ 9833682 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other upstream 1192043 10218473 ~ 10385967 (-)

Expression


Co-expression Network