flna (flna,LOC107737611,LOC107712729,LOC107570276,LOC107699576)


Basic Information

Item Value
gene id flna
gene name flna,LOC107737611,LOC107712729,LOC107570276,LOC107699576
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11762429 ~ 11794733 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224287.1
TTGATACTTTACCAATTAAGGTTCTCGCATTAAGACCAGACAGGACAGAAGGAGGCAGAAACGACTGAGGGCTGTCACTAGCGTGTTTTCTCGAGTTCAGCGCGCAAGCTTTTCCTCCAGGGACGCTCGTCGGCTCCGGGAGGGTCGTGCAGTGAGATTTGTGCACCGCGCTCCAGTCAAGTTCACTCTCCGCTGCCTGTGCCACACGCAGACTCTGAAGGGATACGGGAACAAGAAGCACTTCAAGACAAGCGTCAAAATTCACATAACTCTGGAAAGAAGAGCACACAAATCGTACAATTCCACCAGACTCCACCCAAAAAGCGAGACAGCGAATTAGTGCAGGAGACCCGAGTCGATAAAAATGAGTCAACACACACGCCCCCACCAGTCGagcgccgccgccgccgctccCCTATCCAACGCTTCTCTCTCCCCGGACAAGGACGCAGACATGCCCGCTACAGAGAAAGATCTCGCCGAGGACGCGCCGTGGAAGAAGATCCAGCAGAACACATTCACGCGTTGGTGCAACGAGCATCTGAAATGCGTCAACAAGCGCATAGCGAACCTGCAGACGGACCTGAGCGACGGGCTCCGGCTGATCGCGCTCCTGGAGGTGCTCAGCCAGAAGAAGATGTTCCGCAAGTACAACCAGCGCCCCACGTTCAGACAGATGCAGCTGGAGAACGTCTCTGTGGCTCTGGAGTTCCTCGACAGGGAAAACATCAAGCTGGTGTCTATagACAGTAAGGCCATAGTTGATGGGAACCTGAAGCTCATCCTTGGTCTGATATGGACTCTGATTCTCCATTATTCCATCTCCATGCCCATGTGGGACGAGGAGGAAGAGACTGAAGAAAGCAAGCAGAAGACGCCTAAACAGAGGCTGCTCGGATGGATCCAGAACAAGCTGCCCGAGCTGCCCATCACCAACTTCAGCCGGGACTGGCAGTCAGGGAAAGCCCTTGGCGCTCTGGTGGACAGTTGTGCTCCAGGTCTCTGTCCAGACTGGGATTCGTGGGACCAGACCAAGCCTGTGGACAATGCCAGGGAGGCCATGCAGCAGGCTGATGACTGGCTTGGTGTTCCTCAGGTGATCACTCCAGAAGAAATCGTTGATCCCAATGTGGACGAGCACTCTGTTATGACTTACCTATCCCAGTTCCCCAAAGCCAAACTCAAGCCTGGTGCTCCCCTGAGGCCCAAACTCAACCCTAAAAAGGCCCGTGCCTATGGACCAGGTATTGAGCCCACAGGTAATGTTGTGATGAAGaaggcagtgttcactgttgaGACCATCAGCGCCGGTCAGGGTGAGGTTTTGGTTTATGTGGAGGACCCAGCCGGCCACCGTGAGGAGGCCAAAGTTACAGCCAACAATGACAAGAACCGCACCTACTCAGTATTCTATGTACCAAAAGTCACTGGGCAACACAAGGTGACAGTGCTGTTTGCAGGGCAACACATCTCCAAAAGCCCGTTTGAGGTAGATGTGGGAATGGCTCAGGGAGACTCCAGCAAGGTCACTGCCCAGGGCCCAGGCCTTGAGCCTGCTGGCAACATTGCCAACAAGACGACATACTTTGATGTCTACACAGCTGGTGCTGGAGTAGGAGAGGTCGAGGTGGTCATTATGGACCCCAGTGGAAAGAAGGGTACTGTTGAATGTAGTGTTGAGGATAAGGGCAACAGCAGCTACCGATGCACCTACAAGCCCACTCAGGAGGGCCAGCATATCATCTACATCACATTTGCTGGGGGGCAGATCTCCAAGAGCCCTTACACTGTCCATGTGGGAGAAGCCTGTAATCCAAGCCTGTGTAGAGCCAAGGGCCGTGGGCTGCAGCCTAAAGGCTTAAGAGTTAAGGAGACTGCAGAGTTCAAGGTTTACACCAAAGGAGCTGGCACTGGAGACCTCAAAGTCACCATCAAAGGGCCCAAGGGTCTTGAGGAGCCCTGTAAGAAGAAGGATCTGGGAGATGGTGTGTACAGCTTTGAGTATTACCCTACCACACCTGGCAATTACATCATCACGATTACATGGGGTGGACAACACATCCCACGCAGTCCGTTTGAGGTAAAGATTGGATCTGAAGCAGGACCGCAGCAGGTCAGGGCATGGGGTCCCGGATTGGAGAGTGGTGTGGTAGGCAAGTCTGCTGACTTTGTGGTGGAAGCTGTCGGAGATGATGTGGGCACTTTGGgtttctcagtggagGGCCCATCCCCAGCTAAGATTGAATGTGACGATAAGGGAGACGGCTCCTGTGATGTGAGGTACTGGCCCACAGAACCGGGCGAGTATGCAGTTCATGTGCTTTGTAAGAACGAGGACATCCAGCTAAGCCCTTTCATGGCTGAAATCGTGCCTGCTCCAGGAAAAGACTTCTACCCTGACAAGgTGAAGGCTTATGGTCCAGGTCTGCAGAGCTCTGGCCTTTCAGTTGGCAAACCAGCAGAGTTCACTGTGGATGCCAAACTAGGTGGCAAAGCTCCTCTAAAGATTCAAGCTCAGGACCGTGATGGGAACCCAGTGGATGTTCAGGTGAAGGATAATGGTAATGGAACATACAGCTGCAGCTACACCCCTCGCAAACCACTCAAACACACTGTGATGGTGTCCTGGGGCGGAGTCAACATCCCAGAGAGCCCATTCAGGatGAACATTGGGGCAGGGTGCCATCCCAATAAGGTCAAAGTATCAGGACCTGGAGTGGCCAAGACTGGCCTGAAGGCATTCGAACCAACATACTTCACTGTGGATTGTGCTGAGGCAGGACAGGGTGACATCAGCATAGGCATCAAATGCGCTCCAGGTGTTGTGGGGCCTGCCGAGGCTGACATCGATTTTGACATCATTAGAAATGACAATGACACATTCACTGTGAAATACACCCCTCCTGGGGCAGGCAGCTACACAATCATGGTGCTGTTTGCCGATCAGGCCATTCCCCTGACTCCCATCAGAATCAAGGTTGATCCCTCTCATGATGCCAGCAAGGTTAAAGCAGAAGGCCCTGGACTCAACCGTACTGgtgtggAGTTGAACAAACCCACACACTTCACTGTGAACACCAAGGCTGCAGGCAAAGCTAAGCTTGACGCTCAGTTCACTGGACCCACCAAGGGAGAGGCAGTCCGTGACTTTGACATCATCAACAATCATGATGGCACCCACACTGTTAAATACACCCCTGTTCAGCAGGGCAATATGGGTTTGAATGTCACCTATGGTGGTGATCCCATTCCCAAGAGCCCGTTTGCTGTAGCTGTTGCCCCATCCCTGGATCTCAGTAAAGTTAAAGTGGCTGGTATTGGAGATAcaaTGACTGTCGGAAAGGATCAGGACATCACAGTCAAGTCCAAAGGAGCAGGTGGTCAGGGCAAGGTTGGCGCCAAAGTCACAGGTCCATCTGGTAAATCGGTGCCTTGTAAAGTTGAGCCAGGCCTGAGCCCAGAAACCAGCCAGGTCCGTTTTATCCCCAGAGATAAGGGACCTTATGAGGTTGAACTGACATATGATGGCGCTCCCATCCCCGGCAGTCCATTCCCTGTGGAAGCAGTTGCACCTACTGACCCATCTAAGGTGCGATGTTCTGGGCCAGGTCTGGAGCGAGCTAAAGTTGGTGAGCCAGGACAGTTTGTGGTCGATTGCACTAATGCTGGTCCTGCTGAGTTGACTATCGAGATCATCTCAGACAATGGCACCGAGGCTGAAGTCCATATTCAGGACAATGGGGATGGAACCTACACCATCACTTACATCCCTCTGTACCCTGGAGCTTATACTCTCACAATCCGCTATGGTGATCAGGATGTGCCAAACTTCCCAGCCAGACTCAACGTGGAGCCTGCTGTGGAGACAAGTGGAGTGAAAGTGTTCGGACCTGGAGTGGAAGGCAAAGGTGTTTTCCGGGAGGCCACGACCGATTTCACTGTGGATGCTCGTGCTCTCACCAAAGCGGGTGGCAATCATATCAAGACCTGTGTTAATAACCCATCAGGCAACCACACTGAGGCTCTGATTAGAGACCTGGGAGACGGCACCTATCAAGTGGAGTACACGCCCTACGAGGAGGGCACACACAGTGTTGAGGTTATGTATGATAACGCTCCAGTTCCCAAGAGCCCGTTCCGTGTGCCTGTGACCGAGGGCTGTGACCCAGCACGTGTGCGTGTACATGGTCCAGGACTTCAGTCTGGCATCACTAACAAACCCAACAAGTTTACTGTGGAGACCCGTGGGGCTGGTACAGGAGGACTGGGGCTGGCTGTGGAGGGACCTTCTGAAGCCAAAATGTCCTGCACTGACAACAAAGATGGCAGCTGTTGTGTTGAATACATCCCATATGAGCCAGGCACATACAACCTCAATGTCACCTATGGAGGCCAGCCAATCACTGGAAGCCCCTTCTCTGTACCTGTGCATGATACTGTAGACGCAAGTAAAGTGAAATGCCAGGGTCAGGGTCTTGGAAACAATGTGCGTGCCAACATCCCACAGGTCTTTTCTGTGGATACAAGCAAGGCTGGAGTGGCTCCCTTGCAGGTCAGAGTGCAGGGACCCAAAGGTGTTGTGGAGCCTGTTGAGGTGGTGGATAAAGGTGACCGGACTCACAGAGTCAGCTATGTGCCCACCAGAGAGGGGCCATATTCTATTAATGTCCTGTATGCCGATGAAGAGATCCCACACAGTCCTTATAAGGTGAAGGTTCTGCCCACTCATGATGCTAGTAAGGTCCGCGCCAGTGGCCCCGGTCTGAATACCACCGGTGTGCCTGCCAGTCTGCCTGTGGAGTTCACAATTGATGCCAAAGATGCAGGAGAGGGACTCTTGGCGGTCCAGATTACTGACCCTGACGGGAAGCCGAAGAAGGCTAACATTCGTGATAATCAGGATGGGACGTATCTTGTATCCTATGTGCCTGATATGACTGGTCGCTACACAATTCTCATCAAATACGGTGGTGATGAGATCCCATACTCTCCATATCGTATCAGAGCCCTGCCAACAGGAGATGCCAGCAAATGCACTGTCACAGTCTCAATCGGAGGTCACGGTTTGGGGGCTGGAGTTGGTCCAACTATTCAGATCGGAGAGCAGACGGTCATCACTGTGGATGCAAAGGCAGCTGGGAAGGGCAAGGTGACGTGCACAGTGTGCACTCCGGATGGAGGCGAGGTGGATGTGGACGTGGTTGAAAATGAGGATGGAACATTTGACATCTTCTACACAGCACCCCAGCCTGGCAAATATGTCATCTGCGTACGCTTCGGTGGAGAGCACATCCCCAACAGCCCCTTCCAAGTCACGGCTTTGGAAGGTGACTCTCCAGACCAACTAATGCAGCAGAGCCAGAACCTGCAGTACGCCTACGCGCCCAACATGGGCCAGCCATGGGCTACAGACAGGCAGTTGGGCATGAACGGATTGGACGTAGCTGGTCTGAGACCCTTCGACTTGGTCATTCCTTTCACCATCCAGAAAGGAGAAATTACAGGTGATGTAAGAATGCCTTCTGGAAAAGTGGCCAAGCCTGATATTACTGATAACAAGGACGGCACAGTCACCGTAAAATACGCCCCGACTGAGGCTGGCCTGCATGAGATGGACATCAAATACGACGGAATACACATCCCAGGAAGTCCACTGCAGTTCTATGTGGATTATGTCAACAGTGGCCATGTGACAGCCTATGGTCCTGGTCTAATTCATGGCATGGTTAATAAACCTGCAGTCTTCACCGTCAACACCAAGGATGCCGGAGAGGGTGGTCTTTCTCTGGCCATCGAGGGTCCGTCGAAGGCAGATATCAGCTGCACAGATAATCAGGACGGTACCTGTACTGTCTCTTACCTCCCTGTTCTTCCCGGAGACTACAACATCATTGTCAAGTACAACGACAAGCACATTCCTGGCAgccctttcatggccaagatcaCAGGTGATGACTCAATGCGCATGTCTCATCTGAAGGTGGGCTCAGCGGCTGATATCCCACTAGACATCGGCGAGCTGGACCTCAGCCAGCTGACAGCGTCTCTTACCACCCCCTCTGGCCGAGAGGAGCCATGTCTGCTCAAGATGCTCAGGAATGGTCACGTGGGCATTTCCTTTGTGCCCAAGGAAATTGGAGAGCATTTTGTGAACATCAAGAAAAATGGCCGTCATATTCCTAATAGCCCCATCTCAGTCATGATCAACCAATCAGAGATTGGTGATGCCAGCCGTGTGCGTGTAACTGGTCAAGGGCTGAGTGAAGCTCGCACCTTTGAGCCTGCAGACTTTATCATTGACACCAGAGATGCAGgATATGGAGGGCTCAGTTTGTCTATTGAGGGACCCAGTAAAGTAGATATCAACACTGAAGATCAGGAAGATGGCACCTGCAAAGTCACTTATTGCCCCACAGAACCAGgaaattacattattaacatCAAATTTGCAGACCAGCATGTTCCAGGAAGTGCTTTTACCGTCAAAGTGACAGGAGAGGGTCGGATGAAGGAGAGCATCACCCGCAGAAGAAGAGCTGCCTCTGTGGCCAATGTTGGCAGCCAGTGTGACCTAAGCCTAAAGATCCCTGAGATCAGCATCGCAGACATGACTGCTCAAGTGACCAGCCCATCTGGCAAAGTACACAAGGCTGAGATCATGGAGGGAGAAAACAACACGTACTGCATTCGCTTCGTGCCCACAGAGATGGGTGTGCACACAGTTAGTGTGAAGTATCAAGGTCAGCATGTCCCCGGATCCCCCTTTCAGTTCACTGTGGGTCCCCTCGGAGAGGGAGGAGCCCATAAGGTCCGTGCAGGAGGACCAGGGTTGGAGAGAGCAGAAGCGGGTGTACCAGCTGAGTTCAGCATTTGGACCCGTGAAGCAGGAGCTGGTGGTCTGTCTATTGCGGTCGAGGGACCCAGCAAGGCAGAGATTGCTTTTGAAGACCGCAAGGATGGATCCAGCGGTGTCTCATACATTGTCCAGGAGCCTGGTGATTATGAAGTATCCATCAGATTCAATGATGAGCACATCCCTGACAGTCCATTTGTGGTGCCTGTGGCTTCACCATCTGATGACGCCCGCCGTCTCACTGTTGCCAGTCTTCAGGAGTCCGGATTAAAGGTGAACCAGCCGGCCTCTTTTGCTGTGAGCCTAAATGGAGCGAAGGGAGTCATCGATGCCAAAGTTCACAGCCCATCTGGAGCACTTGAAGAGTGCTGTGTTACAGAGATCGATGAAGATAAGTATGCTGTGAGATTCATCCCCAGGGAGAATGGCCTGTACCTGATAGATGTGAAATTCAACGGTTCTCACATCCCTGGAAGCCCCTTCAAGATCCGTGTTGGTGAAACTGGCCAGGCTGGAGACCCAGGAATGGTGTCTGCTTACGGAGCTGGTCTGGAAGGAGGCACCACTGGATCTCCATGCGAGTTCATTGTGAACACGAGTTCAGCCGGCCCAGGAGCTTTGGCAGTGACCATTGATGGGCCCTCCAAGGTAAAGATGGACTGTCAGGAATGCCCAGAGGGCTACAAGGTCACCTACACACCTATGGCACCTGGAAACTACCTAATTTCTATCAAATACGGTGGACCGTACCATATTGTTGGCAGCCCGTTCAAAGCTAAAATTACAGGTTCCCGATTGGTCAATAGCCACAGCATGCATGAGACTTCATCAGTACTAGTTGATCCTGTGACTCGCAGCGTGACGACCAGCCAGCAGGCAGCGCCAGGCTGGGGCAGCTCCGACGCCAGCCGCGTGGTTGCCAAGGGTCTTGGACTCAACAAAGGCTTCATAGGACAGAAGAACACTTTCAGTGTGGACTGTAGTAAAGCAGGGAGGAACATGCTCCTGGTTGGAGTGGATGGACCCAAAGTGCCATGTGAGGAGATCTTGGTGAAACACTTGGGAAACCGTCTCTATAACGTGTCCTACCAGCTGAAGGAGAAAGGAGAGTACATCCTGGTGGTGAAATGGGGCGACGAACACATCCCCGGGAGCCCGTATCGCATCACTGTTTAACTGCCCTCCGCCCAAACCTCCAGCATCAAATACAAGAACACTGAAAACTCTCTTgtccttctttttttaatgatcctCTCATCCAGTATCTTCCTGCACCACTATTCAGCTTTCAAGCAAGAGAGGGATGTCAAAGAAGCACCTTGTCACTGTATGCCAGTCATTTTTGGATCCTGTTACATTTGCTGCACTCAGTAATCCTTTAAATCCTAGGGTCCTGGTGGCTTTTGCTCCGTGTTTGGTTTGTTACTGATCTAGTCTCTAACACAGAGTAGCTGCTAGTATGTTTTTGCCTGGTTTAGGAGACTGCTGTTCCAGTCATAACTGTACAGAGTTGCCGTACGTTGTTAGTAGCAGGAGAAATACAGATGTGATTCAGCCGCTTGTTTAACACATTCTTAATTTTACTTGCCATTGGGTGAAGAGGCGCTTAACCATAGACTATCACGTAGACTGAATTAACACTGGTGCCGAAGCTCTGTGGGTCTGACCTTCTGTCTGagtgttttgaatatttttcagtCTGCAGAGCTGCATGTTGCTTCCGTTTGACCATGAAGACGTTTTAGAAAATGGAATTTGGGTGCCATTTAAAGCCAAGATTGTGTGCCGCAAAGTGATTTAGAAATCAAAGGGAAGTTACATGGCAGAATAAAGATGATGCGGACCATGTCATTTGGCTGAAGGTTGTAACGAAAGGGAGATTTCTGATGCATACTGCTTGAGTTTATTGTTGGTTATGTAAAACGCACTTGGAAGTTGTAACATTTGACAAAACGTCACTTATTTGCGCTCACTTTGTCAGCTCTTTAGCCCTTTGTTCTCcaatgttaatgtttaatcagtattccaaaatgaaaaaaaaaaaaaaacaaattagttgTCTAAAAATTTTTGACTTGCAGTATTTTGTTACACAATAAAGTTGTCTTAACTATTTTTCTGTCAA

Function

symbol description
flna Predicted to enable actin binding activity. Human ortholog(s) of this gene implicated in X-linked recessive disease (multiple); bone development disease (multiple); heart valve disease (multiple); periventricular nodular heterotopia; and terminal osseous dysplasia. Orthologous to human FLNA (filamin A).

NR:

description
filamin-A-like

GO: NA

KEGG:

id description
K04437 FLNA; filamin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224287.1 True 8978 mRNA 0.51 47 11762429 11794733

Neighbor

gene id symbol gene type direction distance location
dnase1l1 dnase1l3,LOC107737612,LOC107672041,LOC107560934,LOC107570280,LOC107712731 coding upstream 20558 11738795 ~ 11741871 (+)
abhd6b abhd6b,LOC107737716,LOC107712730,LOC107560889,LOC107671974,LOC107699577 coding upstream 35937 11723156 ~ 11726492 (+)
flnb LOC107737717,LOC107560870,LOC107671935 coding upstream 40143 11705759 ~ 11722286 (+)
slmapb slmapb,LOC107560933,LOC107712736,LOC107699575 coding upstream 58039 11695816 ~ 11704390 (+)
atp6ap1lb atp6ap1lb,LOC107672058,LOC107737620,LOC107560932,LOC107570286,LOC103031199,LOC108436292,LOC107699574,LOC105890636 coding upstream 68938 11685712 ~ 11693491 (+)
emd LOC107737610,LOC107671981,LOC107712726,LOC107560939,LOC107699568,LOC107570273 coding downstream 1761 11796494 ~ 11799916 (+)
cfap126 NA coding downstream 71985 11866718 ~ 11868437 (+)
tnnc1b tnnc1b,LOC107671989,LOC107568847,LOC108276054,LOC107593406,LOC105890642,LOC103374679 coding downstream 128151 11922884 ~ 11924595 (+)
tnnc2.1 si:rp71-17i16.4,LOC107737591,LOC107568845,LOC103044939,LOC108434838,LOC103362008,LOC102782874 coding downstream 254028 12048761 ~ 12060362 (+)
tnnc2.2 tnnc2,LOC107699597,LOC107593400,LOC107672048,LOC107737590,LOC107568846,LOC108276484,LOC108233126,LOC108434847,LOC102220434 coding downstream 266983 12061716 ~ 12064341 (+)
G156828 NA non-coding upstream 27492 11734256 ~ 11734937 (+)
G156701 NA non-coding upstream 106049 11655795 ~ 11656380 (+)
G156700 NA non-coding upstream 107113 11654916 ~ 11655316 (+)
G156699 asb14b,LOC107560887,LOC107671999,LOC107737718 non-coding upstream 107812 11654255 ~ 11654617 (+)
G156698 asb14b,LOC107671999,LOC107560887,LOC107737718,LOC108276494 non-coding upstream 108269 11653380 ~ 11654160 (+)
G156843 tktb,LOC108410447,LOC107671986,LOC103046877,LOC107737598 non-coding downstream 33008 11827741 ~ 11926375 (+)
G156881 LOC107737595,LOC107671985,LOC107568839 non-coding downstream 151951 11946684 ~ 11972922 (+)
LOC122328486 NA non-coding downstream 235413 12030146 ~ 12037888 (+)
G156933 NA non-coding downstream 379797 12174530 ~ 12174915 (+)
G156931 NA non-coding downstream 409523 12204256 ~ 12205395 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 15859 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 30068 11730980 ~ 11732361 (+)
G156586 NA other upstream 585396 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 676825 11077154 ~ 11085604 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 838441 10913904 ~ 10923988 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other downstream 451460 12246193 ~ 12251982 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 2299345 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 2504968 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 2809060 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 2814796 14609529 ~ 15153978 (+)

Expression


Co-expression Network