LOC122328548 (LOC107560872,LOC107712665,LOC107737683,LOC107671934)


Basic Information

Item Value
gene id LOC122328548
gene name LOC107560872,LOC107712665,LOC107737683,LOC107671934
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11736897 ~ 11737585 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224297.1
ATGAAAACAGAGGTGTCAGTGGCCGCTTCTTTCATCGGTGGTTTACTGAGCAGCAGGGACTCTCTGACTGGAGATCAGCTGCAGATCtttactcacacactcactggtGCTCTTCTGGAACACTATCTGCACCATTGGTTTCCTCAAGATCCCTGCAGAGGCTCTGGCTACAGATGTTTACGGATCAACCATAAAATGGACCCGCTTATAGGAAAAGCAGCCTCTGCAGTTGGATTTACAGAAGAGCAGCTTTTCTCATCACTTCCAGTAGAGCTGACACTGTGGGTGGACCCTTACGAGGTGTCCTATCGGATCGGTGAGGATGGATCCACTTGTGTTCTCTACGAGTCCTCTCCGCCACAGCCTAAAAATGCCACCTCAGCAGATGCATCAGCTCACAGGAAGGAGAAACTAAAAACCAGATGATCGAATCAATAAAAAGATTTCACGTAACGGAGAGGGCCCtctgtatata

Function

NR:

description
PREDICTED: protein BTG1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224297.1 True 475 mRNA 0.48 2 11736897 11737585

Neighbor

gene id symbol gene type direction distance location
ognb zgc:193598,LOC107671963,LOC107737613,LOC107570281,LOC107699558 coding downstream 1951 11732231 ~ 11734946 (-)
dnah12 dnah12 coding downstream 53490 11657491 ~ 11683407 (-)
asb14b asb14b,LOC107560887,LOC107671999,LOC107737718,LOC108436293,LOC108276494 coding downstream 80294 11651399 ~ 11656603 (-)
tasorb LOC107737622,LOC107671998,LOC107712737,LOC107570279 coding downstream 85626 11638613 ~ 11651271 (-)
LOC122329255 klhdc8b,LOC107712738,LOC107671938,LOC106572099,LOC107570270 coding downstream 105921 11544530 ~ 11630976 (-)
LOC122329333 NA coding upstream 5085 11742670 ~ 11742803 (-)
haus7 LOC107737606,LOC107712722,LOC107560873,LOC107671952,LOC107593450 coding upstream 64193 11801778 ~ 11805140 (-)
LOC122329113 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107737609,LOC107576394 coding upstream 68771 11806356 ~ 11807389 (-)
ccnq fam58a,LOC107737713,LOC107671950,LOC107560943,LOC107699584,LOC107593410,LOC107712723 coding upstream 124302 11861887 ~ 11866571 (-)
b4galt3 LOC107737602,LOC107593408,LOC107672040,LOC107699583 coding upstream 130857 11868442 ~ 11880517 (-)
G156812 NA non-coding downstream 196852 11539623 ~ 11540045 (-)
LOC122328925 NA non-coding downstream 360209 11376177 ~ 11376688 (-)
G156785 NA non-coding downstream 383069 11353159 ~ 11353828 (-)
G156762 NA non-coding downstream 492077 11242600 ~ 11244820 (-)
G156759 NA non-coding downstream 573878 11162664 ~ 11163019 (-)
G156962 NA non-coding upstream 24855 11762440 ~ 11763023 (-)
G156971 NA non-coding upstream 43982 11781567 ~ 11782366 (-)
G156972 NA non-coding upstream 56018 11793603 ~ 11851710 (-)
G156978 NA non-coding upstream 317661 12055246 ~ 12061368 (-)
G156973 NA non-coding upstream 323862 12061447 ~ 12064715 (-)
G156746 NA other downstream 631674 11100744 ~ 11105223 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 1058747 10675680 ~ 10678150 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other downstream 1350930 10218473 ~ 10385967 (-)
LOC122328546 rpl10 other upstream 3815 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 7677 11745262 ~ 11745395 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other upstream 26124 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other upstream 62337 11799922 ~ 11801632 (-)
G156985 NA other upstream 185259 11922844 ~ 11924650 (-)

Expression


Co-expression Network