zgc:101663 (LOC107709235,LOC107697032,LOC107566074,LOC107746337,LOC107554219,LOC107673483)


Basic Information

Item Value
gene id zgc:101663
gene name LOC107709235,LOC107697032,LOC107566074,LOC107746337,LOC107554219,LOC107673483
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3483012 ~ 3491622 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224366.1
CAACCTCTGAAACATTTCATTCAACCTTTGCTCGGCTGAGGGAAAGCCACTCCTCAGGACAGCTCTGGAGGAGCACCAGCACCGGGGTAAACGCGCGAAACACTTCACTGAAGGGAATAAAGACCCTATCAAAGGACACTAGGAAGTGAATGAACTCGCGTCGAGTCCCCCATACACGCCGTTTTCTCGCTTTACGTTAAATATCGTTTTGAATGGTGTCTTATATCGCTGTACAAGGCTGTGATAGAAAGCAGAAGAAGGTGTGGGATGAGATGCCATCTGAAAAAAGTCCTCCTCCTAGCAGCCGGTCTTCTCGTTTTGACCAGGGTCTACATCTACATGCGGAGAGCAGAATCGGGAAACCTCAAGGGGTCACTGACCTGGATCTGGGATAAGGAGACTTGGGTGGAGGATCTTAAGGGCCATTATCTCCATTTCAATGTTTCCATTAAAGTTCTGGCAGGAGTCTTCCACCCATCCAAGAAGTACCTGACGGTGGGCCTCTCGTCAGTGAAGAGGGAAAAGGGCAGTTATCTCCAGGACACTATTCAGTCAATCTTCTCCGCCTCCTCAGAGGAAGAGCTGGATCAAATAGTCGTCGTCGTTCTTCTTGCAGACTTTGATGAGAGCTGGATCCAGCAGACATTAAAGAAGATAACAGAAGAATTCCACAAGCAACTGTCCAAGGGTCAACTTCTAGTCATCCACGCCAACGAAGACAGCTATCCTCCCCTCAAAGGACTCAAGAGGAACTTCAATGACGCACCGGACCGCGTGTCCTTCCGATCAAAACAAAACGTGGACTACTCCTATTTGCTGCATTTTAGCAGTAATCTCTCCCAATACTATATCATGCTGGAGGATGACGTGAGCTGTTCCAAGAACTTTCTCACCAGCATGCGTGAGCACATCGGTTCTGTGGGCAACACGAAGTGGGTCACACTGGAATTCTCCAAACTGGGCTACATCGGGAAACTCTACCAATCCAGAGATCTGCCCATTCTATCCCGATTCCTTTATAATTTCTACCAAGAGATGCCCTGCGACTTCCTGCTGACGCATTTTCACCGATTGTTGATGCAGCAAAAAGTCATTCGTTTCCGCCCATCTCTGTTTCAGCACATGGGCACTTACTCGTCATTTAAGGGGACGTTCAACCATTTAAAGGATGAAGACTTTGTTGAAGAAGTTGCCGATAACCCTCCGGCAGACATTAGCACGAATATTGAAACCTATCAGTCCAATTCTGTGGACAAAGCTTACAGCCAAGGATTAGAGTATTTCTGGGGTGTATCTCCTGTTGGCacagaaaacagcattttagtGGTTTTTCATGAACCGGTTCTCCTCTCTCGTGTCCAGGTAGTAACAGGATTGGATGGGAAAGATGAGCTGGTCAGTGCTGATGTGGAACTTGGCAAAATGCTGGTCAAAAAGGAGTCGGAGGTGGAGTGCTCTGGATTTGAGAAGCTGGGTTCTCTCCAGGAAGGCCGCTTTAATGAACCGGCTGTTCAGAAACTTGTGCCGGCAACCGTGGCGTGTTTACGAATCCGAGTCACTGCAGTCCAAACGACTTGGGTTGTCGTGCGCAAGATCCAGGTCTGGACTGTTAAAGCGGACCGGACCACTTGAAATATTTCTGCTGTGCATTTCTTATCATGACCTTAAAAGGCTCAAATTAGACACATTCTTGGTAATCTGTATGTGAAGCAATGATGTCATTACACTGcataaaataatggaaaaaatatttttaaaacaaaatatatttacttaggCATACTATATTTTCTTTAGGAAACTTTatctaaatgacttttattatgcTGTTcccattataaaatatttctgttgctaatagtataaacattttaataaacttattttttacttaaaatgagctattaaaaaacctttttggcAACTTTTTGCAAGGTTTTCCAAAATGATACACATCAAATTTCATACAAATAGTTTTTGTTCcgtttttattttaggtaaaGGTTTGGCAATTTTCTTTGGTGTTTTTGTCAACATATCTGCATAATTTTTTGGGTTTTTAATCGACAATTTAatctcatattttattttggtataagtttattttgtttcaatgaattattattattattattatttatggttTAAGGTTTAATTAACAATAGTAAGCCtattttgaactcttaaaatgCATGAggcttaaaattatttttataaaaaacatgacCTGGGTGTTGGATGTGGTAAAAGAGGATGCCAAGATTTAAAGAGCATTTTAcagtcaaaatatttacatttacaagtcTTGTAAAAACAGAGGATGGTTTGTAAATTACGCCCCCTAGGGATGATGGCTTTGAATAACTTGAAATACAATTCCTTAGTTCTATCACTCCAAGCACCGACAAGGGCAAAATGCTTAAGCTAGTTTacattcaacacacacacacacacacacgctgggTTTTTTGGGAACATTCCATGggcataacttttttttataatgtaatattattccTTTTATTAAGCTGTTTCTCTCATGGGGACCCACAAGGACtgaaaaatgtccccacaaggatttTGGACATTGCAATCTTTGTATTGTAGGGTGTGTCTTCGTTTTGCTCAGTATTTGTGTGCGCTTACATGCGTGGTATTAACTCTTGTTGAAcgttatactgtatgttttctcTCTCAGGGACGGAcggtaaaaaaagaacatatgtATACTACGATTAAGAGATAATCGAACAGCTCGGCATCACAAACTGATATCATAGTTTTGCTATATTGTATACACAACAGCCAATTAAATTCATTTCATGTTTA
>XM_043224367.1
CAACCTCTGAAACATTTCATTCAACCTTTGCTCGGCTGAGGGAAAGCCACTCCTCAGGACAGCTCTGGAGGAGCACCAGCACCGGGGTAAACGCGCGAAACACTTCACTGAAGGGAATAAAGACCCTATCAAAGGACACTAGGAAGTGAATGAACTCGCGTCGAGTCCCCCATACACGCCGTTTTCTCGCTTTACGTTAAATATCGTTTTGAATGGTGTCTTATATCGCTGTACAAGGCTGTGATAGAAAGAAGAAGGTGTGGGATGAGATGCCATCTGAAAAAAGTCCTCCTCCTAGCAGCCGGTCTTCTCGTTTTGACCAGGGTCTACATCTACATGCGGAGAGCAGAATCGGGAAACCTCAAGGGGTCACTGACCTGGATCTGGGATAAGGAGACTTGGGTGGAGGATCTTAAGGGCCATTATCTCCATTTCAATGTTTCCATTAAAGTTCTGGCAGGAGTCTTCCACCCATCCAAGAAGTACCTGACGGTGGGCCTCTCGTCAGTGAAGAGGGAAAAGGGCAGTTATCTCCAGGACACTATTCAGTCAATCTTCTCCGCCTCCTCAGAGGAAGAGCTGGATCAAATAGTCGTCGTCGTTCTTCTTGCAGACTTTGATGAGAGCTGGATCCAGCAGACATTAAAGAAGATAACAGAAGAATTCCACAAGCAACTGTCCAAGGGTCAACTTCTAGTCATCCACGCCAACGAAGACAGCTATCCTCCCCTCAAAGGACTCAAGAGGAACTTCAATGACGCACCGGACCGCGTGTCCTTCCGATCAAAACAAAACGTGGACTACTCCTATTTGCTGCATTTTAGCAGTAATCTCTCCCAATACTATATCATGCTGGAGGATGACGTGAGCTGTTCCAAGAACTTTCTCACCAGCATGCGTGAGCACATCGGTTCTGTGGGCAACACGAAGTGGGTCACACTGGAATTCTCCAAACTGGGCTACATCGGGAAACTCTACCAATCCAGAGATCTGCCCATTCTATCCCGATTCCTTTATAATTTCTACCAAGAGATGCCCTGCGACTTCCTGCTGACGCATTTTCACCGATTGTTGATGCAGCAAAAAGTCATTCGTTTCCGCCCATCTCTGTTTCAGCACATGGGCACTTACTCGTCATTTAAGGGGACGTTCAACCATTTAAAGGATGAAGACTTTGTTGAAGAAGTTGCCGATAACCCTCCGGCAGACATTAGCACGAATATTGAAACCTATCAGTCCAATTCTGTGGACAAAGCTTACAGCCAAGGATTAGAGTATTTCTGGGGTGTATCTCCTGTTGGCacagaaaacagcattttagtGGTTTTTCATGAACCGGTTCTCCTCTCTCGTGTCCAGGTAGTAACAGGATTGGATGGGAAAGATGAGCTGGTCAGTGCTGATGTGGAACTTGGCAAAATGCTGGTCAAAAAGGAGTCGGAGGTGGAGTGCTCTGGATTTGAGAAGCTGGGTTCTCTCCAGGAAGGCCGCTTTAATGAACCGGCTGTTCAGAAACTTGTGCCGGCAACCGTGGCGTGTTTACGAATCCGAGTCACTGCAGTCCAAACGACTTGGGTTGTCGTGCGCAAGATCCAGGTCTGGACTGTTAAAGCGGACCGGACCACTTGAAATATTTCTGCTGTGCATTTCTTATCATGACCTTAAAAGGCTCAAATTAGACACATTCTTGGTAATCTGTATGTGAAGCAATGATGTCATTACACTGcataaaataatggaaaaaatatttttaaaacaaaatatatttacttaggCATACTATATTTTCTTTAGGAAACTTTatctaaatgacttttattatgcTGTTcccattataaaatatttctgttgctaatagtataaacattttaataaacttattttttacttaaaatgagctattaaaaaacctttttggcAACTTTTTGCAAGGTTTTCCAAAATGATACACATCAAATTTCATACAAATAGTTTTTGTTCcgtttttattttaggtaaaGGTTTGGCAATTTTCTTTGGTGTTTTTGTCAACATATCTGCATAATTTTTTGGGTTTTTAATCGACAATTTAatctcatattttattttggtataagtttattttgtttcaatgaattattattattattattatttatggttTAAGGTTTAATTAACAATAGTAAGCCtattttgaactcttaaaatgCATGAggcttaaaattatttttataaaaaacatgacCTGGGTGTTGGATGTGGTAAAAGAGGATGCCAAGATTTAAAGAGCATTTTAcagtcaaaatatttacatttacaagtcTTGTAAAAACAGAGGATGGTTTGTAAATTACGCCCCCTAGGGATGATGGCTTTGAATAACTTGAAATACAATTCCTTAGTTCTATCACTCCAAGCACCGACAAGGGCAAAATGCTTAAGCTAGTTTacattcaacacacacacacacacacacgctgggTTTTTTGGGAACATTCCATGggcataacttttttttataatgtaatattattccTTTTATTAAGCTGTTTCTCTCATGGGGACCCACAAGGACtgaaaaatgtccccacaaggatttTGGACATTGCAATCTTTGTATTGTAGGGTGTGTCTTCGTTTTGCTCAGTATTTGTGTGCGCTTACATGCGTGGTATTAACTCTTGTTGAAcgttatactgtatgttttctcTCTCAGGGACGGAcggtaaaaaaagaacatatgtATACTACGATTAAGAGATAATCGAACAGCTCGGCATCACAAACTGATATCATAGTTTTGCTATATTGTATACACAACAGCCAATTAAATTCATTTCATGTTTA

Function

NR:

description
PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X2

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224366.1 True 2829 mRNA 0.41 4 3483012 3491622
XM_043224367.1 False 2826 mRNA 0.41 4 3483012 3491622

Neighbor

gene id symbol gene type direction distance location
ap4b1 ap4b1,LOC107697033,LOC107672998,LOC107566065 coding upstream 151 3474016 ~ 3482861 (+)
taf11 taf11,LOC107554211,LOC107566076,LOC107696971 coding upstream 49408 3431323 ~ 3433604 (+)
LOC122328845 LOC107554212,LOC107697038,LOC107571185,LOC107673381,LOC100001805,LOC107752455 coding upstream 130678 3319441 ~ 3352334 (+)
twist3 twist3,LOC107696972,LOC107748453,LOC107554215,LOC107576512,LOC107704622,LOC107709223 coding upstream 345034 3133531 ~ 3137978 (+)
rhoac rhoac,LOC107687289,LOC107558917,LOC105890655,LOC108438067,LOC102777028,LOC106572042 coding upstream 489657 2989515 ~ 2993355 (+)
LOC122328605 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding downstream 2515 3494137 ~ 3496896 (+)
slc25a55b zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507 coding downstream 5384 3497006 ~ 3500981 (+)
LOC122329307 LOC107697030,LOC107711716,LOC107746331,LOC107673019,LOC100330283,LOC107598116,LOC104931868,LOC103360392 coding downstream 113634 3605256 ~ 3608341 (+)
kcna2b kcna2b,LOC107746332,LOC107711719,LOC107697029,LOC107673029,LOC107566069,LOC107598117,LOC108438074 coding downstream 137125 3628747 ~ 3631765 (+)
kcna10a kcna10a,LOC107696967,LOC107746531,LOC107559162,LOC107746341,LOC107673534,LOC107598151 coding downstream 158487 3650109 ~ 3655605 (+)
G154584 NA non-coding upstream 82254 3400009 ~ 3400758 (+)
G154582 NA non-coding upstream 87605 3394923 ~ 3395407 (+)
LOC122328887 NA non-coding upstream 167752 3314508 ~ 3315260 (+)
G154561 NA non-coding upstream 240290 3242215 ~ 3242722 (+)
G154517 NA non-coding upstream 276324 3206482 ~ 3206688 (+)
G154647 NA non-coding downstream 108820 3600442 ~ 3600856 (+)
LOC122329308 NA non-coding downstream 116741 3608363 ~ 3614844 (+)
G154661 NA non-coding downstream 143142 3634764 ~ 3636277 (+)
G154667 NA non-coding downstream 148241 3639863 ~ 3640681 (+)
G154673 NA non-coding downstream 165477 3657099 ~ 3657405 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 385977 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 472995 2995169 ~ 3010017 (+)
G154424 NA other upstream 526287 2923382 ~ 2956725 (+)
LOC122329169 NA other upstream 539206 2925308 ~ 2943806 (+)
prdm5 prdm5,LOC107698519,LOC107669703 other upstream 1126285 2312722 ~ 2356727 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other downstream 203030 3694652 ~ 3697022 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 1325743 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 3100980 6592602 ~ 6598532 (+)
G155561 NA other downstream 3734372 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 3806738 7298360 ~ 7305534 (+)

Expression


Co-expression Network