dnajc5ab (LOC107747984,LOC107672029,LOC107563663,LOC107719908,LOC107657050,LOC107560895)


Basic Information

Item Value
gene id dnajc5ab
gene name LOC107747984,LOC107672029,LOC107563663,LOC107719908,LOC107657050,LOC107560895
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10923126 ~ 10934907 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224409.1
TGAGCGGAGACGCCGCTCGGGATCACAAGACCAGGAGGACGCCGTATCCCGGTACCGCAGGCTGATTCGCTCCTGCTCGAAGGCCGTTTATAGCTGTGGGAATTAATTTACGGGCACCCGAGTAAGCGCGCTTCTGCCTACGCGTCTTCCTTGACGAACGAGGAGGTGGTTGTGGAGTgaggggagtgtgtgtgtgtgtgagtaatgGAGCAGCAGAGACAGCGTTCACTCTCCACAGCAGGAGAATCACTGTATGTGGTCCTGGGAGttgataaaaacacagcaccagaagaaataaagaaatccTACAGAAAACTAGCTCTGAAGTTCCACCCTGACAAGAATCCTGACAACCCAGAAGCGGCCGACAAATTTAAAGAAATCAACAATGCTCACGCCATTCTGTCAGACCCCACCAAACGTAACATCTATGACAAATACGGATCTCTGGGCCTCTACGTGGCAGAACAGTTCGGAGAGGAGAATGTTAACACATACTTTGTATTGTCCAGCTGGTGGGCCAAGGCACTGTTTATATTCTGCGGTGTGGCCACAGGCTGTTATTTCTGCTGTTGTCTATGCTGCTGTTGTAACTGCTGCTGTGGGAAATGTAAACCTCATCCTCCTCGGTCAGATGAGCCGGAGTTCTATGTGTCTCCTGAAGACCTGGAAGCTCAGATGCAGTCTGATGAGAGAGGCCGTGCAGATGGCAGCAGCCCCATCGTGATGCAGCCATCTTCTGCCACAGAGACCACTCAGCTGACCGCAGACTCTCACCACACCAGCTACCGGACGGACGCCAGCTATTAaaccctctctcacacacatggGACCACCATGCCAGACAAGGTCACAGTGGGCAGTGGGTGATCCTGAGGAAAGAGGATGAGCAGTTAGTTAGTTGCAGTATCATTGGAAAACCTGAAACGCTCCACTGTACAGGGAAAGAagcaagtttattttaatttgccttTAACCTATTATCCCCAAACCTTCTGCTGTGttatacttacacacacacacacaggcattcTTACAGTGTCCATACAGTCTTCCTGCTATGATCCAAGCTTCATCTTGCCAACAGCTGCTGGTATGCACTGGTTATCAGACTGCGTTTGTCTATATAATacgttttttaataatttacagaTTTTAATTCAAGCATGAATTTGTTTCTACAACAACAGTACACAAGGaagtattttttatgctttagtgcAATGGATAATGAAGCTGCCTGGCATTACACTAGCTGactcggaaaaaaaaaaaatcattctagaGGTTGTCACACTTGTGCTACCATTCAAACATTCACAGTCACTaaatttattgattgatttttcagaaaggatgcattcatttgaaaaggGACAGTAGAGATTTAGGTTACAAATCATTTTAGGTCTATtttagatgccattcttttgagctttatgttcatatataagcagcacaactgttttcaacactgatgataataaatcaatatagcgggtcagcatattagaacgatttctgaaggattaagtgacactga
>XM_043224410.1
AGCGGAGACGCCGCTCGGGATCACAAGACCAGGAGGACGCCGTATCCCGGTACCGCAGGCTGATTCGCTCCTGCTCGAAGGCCGTTTATAGCTGTGGGAATTAATTTACGGGCACCCGAGTAAGCGCGCTTCTGCCTACGCGTCTTCCTTGACGAACGAGGAGGTGGTTGTGGAGTgaggggagtgtgtgtgtgtgtgagtaatgGAGCAGCAGAGACAGCGTTCACTCTCCACAGCAGGAGAATCACTGTATGTGGTCCTGGGAGttgataaaaacacagcaccagaagaaataaagaaatccTACAGAAAACTAGCTCTGAAGTTCCACCCTGACAAGAATCCTGACAACCCAGAAGCGGCCGACAAATTTAAAGAAATCAACAATGCTCACGCCATTCTGTCAGACCCCACCAAACGTAACATCTATGACAAATACGGATCTCTGGGCCTCTACGTGGCAGAACAGTTCGGAGAGGAGAATGTTAACACATACTTTGTATTGTCCAGCTGGTGGGCCAAGGCACTGTTTATATTCTGCGGTGTGGCCACAGGCTGTTATTTCTGCTGTTGTCTATGCTGCTGTTGTAACTGCTGCTGTGGGAAATGTAAACCTCATCCTCCTCGGTCAGATGAGCCGGAGTTCTATGTGTCTCCTGAAGACCTGGAAGCTCAGATGCAGTCTGATGAGAGAGATGGCAGCAGCCCCATCGTGATGCAGCCATCTTCTGCCACAGAGACCACTCAGCTGACCGCAGACTCTCACCACACCAGCTACCGGACGGACGCCAGCTATTAaaccctctctcacacacatggGACCACCATGCCAGACAAGGTCACAGTGGGCAGTGGGTGATCCTGAGGAAAGAGGATGAGCAGTTAGTTAGTTGCAGTATCATTGGAAAACCTGAAACGCTCCACTGTACAGGGAAAGAagcaagtttattttaatttgccttTAACCTATTATCCCCAAACCTTCTGCTGTGttatacttacacacacacacacaggcattcTTACAGTGTCCATACAGTCTTCCTGCTATGATCCAAGCTTCATCTTGCCAACAGCTGCTGGTATGCACTGGTTATCAGACTGCGTTTGTCTATATAATacgttttttaataatttacagaTTTTAATTCAAGCATGAATTTGTTTCTACAACAACAGTACACAAGGaagtattttttatgctttagtgcAATGGATAATGAAGCTGCCTGGCATTACACTAGCTGactcggaaaaaaaaaaaatcattctagaGGTTGTCACACTTGTGCTACCATTCAAACATTCACAGTCACTaaatttattgattgatttttcagaaaggatgcattcatttgaaaaggGACAGTAGAGATTTAGGTTACAAATCATTTTAGGTCTATtttagatgccattcttttgagctttatgttcatatataagcagcacaactgttttcaacactgatgataataaatcaatatagcgggtcagcatattagaacgatttctgaaggattaagtgacactga

Function

NR:

description
PREDICTED: dnaJ homolog subfamily C member 5-like isoform X1

GO: NA

KEGG:

id description
K09525 DNAJC5; DnaJ homolog subfamily C member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224409.1 True 1543 mRNA 0.45 6 10923126 10934907
XM_043224410.1 False 1532 mRNA 0.45 5 10923126 10934905

Neighbor

gene id symbol gene type direction distance location
trim101 LOC107719918,LOC107671958,LOC107560876,LOC107656995,LOC107747989 coding downstream 46 10915631 ~ 10923080 (-)
tpd52l2b tpd52l2,tpd52l2b,LOC107672016,LOC107719909 coding downstream 8923 10903880 ~ 10914203 (-)
ppdpfb ppdpfb,ppdpf,LOC107719911,LOC107560892,LOC107657053,LOC107747982,LOC107563664 coding downstream 21340 10899826 ~ 10901786 (-)
dnmt3bb.1 dnmt3bb.1,LOC107672053,LOC107657059,LOC107747976,LOC107563667,LOC107603157,LOC108276083 coding downstream 158118 10730061 ~ 10765008 (-)
dnmt3bb.2 LOC107707749,LOC107747973,LOC107559473,LOC107657061,LOC107603113 coding downstream 195557 10709346 ~ 10727569 (-)
bhlhe23 bhlhe23,LOC107737661,LOC107560898,LOC107671927,LOC107657004,LOC107756976,LOC107563681 coding upstream 50478 10985385 ~ 10987412 (-)
tfip11 tfip11,LOC107737658,LOC107671994,LOC107657044,LOC107741308 coding upstream 127450 11062357 ~ 11068609 (-)
pm20d1.2 pm20d1.2,LOC107672051,LOC107560903,LOC107737652,LOC107560862 coding upstream 172034 11106941 ~ 11111646 (-)
pm20d1.1 pm20d1.1,LOC107737726,LOC107671971,LOC107656991,LOC107560862,LOC107672051 coding upstream 178102 11113009 ~ 11117428 (-)
lemd1 LOC107741312,LOC107657040,LOC107737650,LOC107563651,LOC107672064 coding upstream 182775 11117682 ~ 11131520 (-)
LOC122329022 NA non-coding downstream 40474 10880591 ~ 10882652 (-)
G156478 NA non-coding downstream 194878 10727964 ~ 10728248 (-)
G156471 NA non-coding downstream 220305 10702596 ~ 10702821 (-)
G156469 NA non-coding downstream 222902 10698597 ~ 10700224 (-)
G156468 NA non-coding downstream 226449 10696452 ~ 10696677 (-)
G156538 NA non-coding upstream 24728 10959635 ~ 10959846 (-)
G156715 NA non-coding upstream 98835 11033742 ~ 11035495 (-)
G156719 rnd1a,LOC107560900,LOC107737660,LOC107657046,LOC107563659,LOC107741331,LOC107672025 non-coding upstream 112238 11047145 ~ 11053295 (-)
LOC122329093 NA non-coding upstream 115386 11050293 ~ 11057995 (-)
G156726 LOC107737655 non-coding upstream 136503 11071410 ~ 11075961 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 244976 10675680 ~ 10678150 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other downstream 537159 10218473 ~ 10385967 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other downstream 555757 10363905 ~ 10367369 (-)
LOC122329224 NA other downstream 563340 10355941 ~ 10359786 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 1089444 9831809 ~ 9833682 (-)
G156746 NA other upstream 165837 11100744 ~ 11105223 (-)
LOC122328546 rpl10 other upstream 806493 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 810355 11745262 ~ 11745395 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other upstream 828802 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other upstream 865015 11799922 ~ 11801632 (-)

Expression


Co-expression Network