dgkaa (dgkaa,dgka,LOC107549042,LOC107671885,LOC107701752,LOC107594021,LOC107756407)


Basic Information

Item Value
gene id dgkaa
gene name dgkaa,dgka,LOC107549042,LOC107671885,LOC107701752,LOC107594021,LOC107756407
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10177186 ~ 10202807 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224480.1
TCTTCACTGTCAGTTCCCAACCGGACAAACACAGCTTAAACGCTTTCTCACAGACGAAGCTGGTTCTGCCTCCGTCgacacttatttattaattttctaagCGCTGAAGCAGTTTTCGAAGTACATCTAATACTGGCGATTTTGCTCTCGGCGTCTGTTTCAGAGATAAGACAGAATCTCTAACCGTGTTCTGCAGACCTCAAGATATTAAGTGTTATTCAGAGGCTCTGGCGTGATGTCAGACCCAGGCGAGTCGGATGACAGAGAGCTGAGGCCGGTAGACTTCATCCAGCTTCAGCAGTACATTGACTACTGCAGTCTAAAAGTAAAAGATGTGTTAAAGGAATTCAATGCAGATGGCAGGTTAGCCAAGTACAGACACGGAGAGTGCATTGATGAGGAAGGTTTCCGCCTCTTCCTGAAGACATATTTGGAGGTGGAGGACTTCCCAACGGATCTGTGTCAGCGGCTGTTCAGATCCTTCCAGAACTCAGAGTCAGCAAAATCAGATGAAAACAGGGAagtatttctgaaggatgtgtCCTGTTACTTCTCCCTCCTGGAAGACGGGCAGCCCAGGGACAAACTTGAATttGCCTTCAGACTCTATGACAGAGATGGCAACGGTGTCCTGGACAGTTCGGAAGTGGACCGCATTATTGCCCAGATGATGCACGCAGCAGATTATCTTGGATGGGATGTGTCTGAACTGAGGCCTGTGCTGAAGGATATGATGACTGCAATTGACGCAGATAGCAGTGGAACAGTGTCATTACAGGAATGGGTGGAGGGGGGAATGAATAACGTCCCGCTGCTGGTTTTACTGGGACTGAAGATGACCCAAAGAGACGGCCAGCACCTGTGGAGGATGAAACATTTCAACAAGCCCGTGTACTGCAATGTCTGTCAGAATATGCTTCTGGGGCTGCGCAAACAGGGTCTCTGCTGCACCTGCTGCAAATACACAGTCCATGGTCGGTGTGCAAATAAAAACCCGGCTCCGTGCACTCGCACATATGTGATGTCAAAGAAAGAGACAGGGAGTGCAATCCATGACTGGGTGAGTGGAAACTGTGATTCTGGGAAGTGTGACCGGTGTCAGAAGAAGATAAAGAGCTTGCACGGTCTCACTGGGAAACGATGCGTCTGGTGTCACACCATGAGACATGACGAGTGTGCAACCAAGGAACCCTTTGAATGTGATTGTGGCCCTTTCAGAGATCATATCTTACCACCGTGGGCCATTTATCCTGTCATCAAGGAGAGGCCGAACTGCATAAAGAACGGCTGCGCATTTGCAAGTGATGACAGTGACCACAACACTACACCTGATGGACAGGTACTACAGATAAACCCAATTCCTGACACTCATCCTCTTTTGGTGTTTGTGAATCCTAAAAGTGGCGGTAAACAGGGGGAGAGAGTCCTTCGGAAATTCCAGTACTTGTTGAATCCTCGGCAGGTTTATAACCTTTCCAATGGTGGACCAGGACCAGGGTTATGTTTCTTCAGAGATCTTCCGGACTATAGAATATTAGTTTGTGGCGGTGATGGCACAGTTGGCTGGATCCTTGATGCTATAGACAAAGCCAACTTGCCAATGCGCCCCCCGGTGGCCGTGCTTCCTCTTGGCACAGGAAATGATCTTGCGCGCTGTCTTCGATGGGGAGGAGGTTATGATGGTGTGGACCTGGGCCGGATCCTGAAGGACATTGAGGGCAGTTCTGTGGTTCATATGGATCGCTGGAGCATACAGGTCACCCTGGAGGACAGTCAGGAGAGAGGTGACCCTGTGCCCTACGAGATCATCAACAACTACTTCTCCATTGGAGTGGACGCCTCCATTGCTCACCGCTTCCACACCATGAGGGAGAAACACCCGCAGAAATTTAACAGCAGAATGAAGAACAAACTGTGGTATTTTGAATTTGCCACATCTGAGACGATCTCAGCATCTTGTAAAAAACTCAAGGAGTGTCTCACCATtgagTGTTGCGGGACACAGTTGGATCTCAGTAGCCTTTCTCTGGAAGGCATCGCCGTCCTCAACATACCCAGCATGCACGGCGGCTCTAACCTGTGGGGTGAAGCCAAAAAAAGTGACCGAGCGGAACCGGACTTGCCCGCAGTCATAGTAGACCCCGAAGTCTTAAAAGTGAGCCCACAAGACATGAGCGACAAACGCGTGGAGCTGGTGGGACTGGAAGGAGCCATGGAGATGGGACAGATATACACAGGGCTGAAGAGCGCAGTCCGACTCGCCAAAACATCTCAGATTACCATCAGGACAAAGAAGCCTTTGCCCATGCAGATTGATGGAGAACCGTGGATGCAGCCACCTTGTACTATtcaaatcacacacaaaaaccaaGCCAGTATGCTGATGGGCCCTCAAGCCAAATCTGGCTTTTTCAACCTGAAATAAGAGTCTACCTGCGCTTGAAGATGATTCAGTTCGCTTTGAAACTCTGTGTGCATTAACAAGGACTCTGAAGCTTATGACAGTGTATGTAAATTTTGCAGCAAATGCTTAATAAGGTTTTAGCGCTTACTCAAAtccttgtgtgtttttctagATTATACATGAGGTACAAAATCTTCACTAGACCATCTTAACATCAAATATGCtctctttaaagaaatgtaGTGCTCTTAAACAGTAGCTCatgcatttttgcatgcatttttttttgctgtgataCACATATCACGTGCACAGTTCATTCCAAGTAAATAGGTTGGATATTTGTTTTAAGATTATGTagatatacataaaaatatgcatcacTCTTATGTATCCAGTGTATGAATCAAGGTTTGATGCACAGTGACTTTGCTGTATAGGTGGTTTAAATATTAGAGATAGATCTTTGCAAACTGCACACTGCTTTTAGTTAttcctttagatttttttctcgGCTACTTTCACTAATTTACCTATCATGAATGTCAGGTTACTCCAGGTTAAAAAGTTACTATTGTGATCTTTACCAGAACAATGACTaggtttagaaaaatgaaatattaaaagcttTATGAGACATCTAATTTATTTGCTGTTAAAAAGTAAACCTCTAAAATTGTAGGTGCAATGCTAAGATTTCAAACCAACAGTATGTTAACTCATTTTATTAGGTTATTCGCATTGTATTAAGAATGTATCAAGTCAGTTGTGTAAAACTGATTTTGTAACATTTCGTACAGTTACACAGTCAGCAGTTTTCCTTCAGATAACTCAATGGGCAAAATTGTAAAGGTTTTAGATAGCACATTTATGGTACTCTGGCaggcattttaatttcatgttgcTCCTGAGAATGTAGAATCTCTTCATTTTGTGAATTTGTCTGAATAAACATTTCAATGTTAAATGA

Function

symbol description
dgkaa Predicted to enable diacylglycerol kinase activity. Predicted to be involved in diacylglycerol metabolic process; intracellular signal transduction; and lipid phosphorylation. Predicted to act upstream of or within phosphorylation and protein kinase C-activating G protein-coupled receptor signaling pathway. Predicted to be active in plasma membrane. Orthologous to human DGKA (diacylglycerol kinase alpha).
dgka Enables diacylglycerol kinase activity and lipid binding activity. Involved in diacylglycerol metabolic process; lipid phosphorylation; and phosphatidic acid biosynthetic process. Located in cytosol.

NR:

description
PREDICTED: diacylglycerol kinase alpha-like isoform X1

GO:

id name namespace
GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0008152 metabolic process biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0005509 calcium ion binding molecular_function
GO:0003951 NAD+ kinase activity molecular_function
GO:0004143 diacylglycerol kinase activity molecular_function

KEGG:

id description
K00901 dgkA, DGK; diacylglycerol kinase (ATP)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224480.1 True 3374 mRNA 0.45 24 10177186 10202807

Neighbor

gene id symbol gene type direction distance location
tamalin grasp,LOC107723769,LOC107594022,LOC107549045,LOC107671830 coding downstream 1144 10162782 ~ 10176042 (-)
nr4a1 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 coding downstream 31734 10140150 ~ 10145452 (-)
rprm3 zgc:92658,LOC107701713,LOC107671842,LOC107723728,LOC107572774,LOC107549031,LOC107756367 coding downstream 45027 10131006 ~ 10132159 (-)
letmd1 letmd1,LOC107572784,LOC107723741,LOC107671881,LOC107701748,LOC107756404,LOC107549047 coding downstream 55818 10117064 ~ 10121368 (-)
ormdl2 ormdl2,LOC107549034,LOC107701708,LOC107671901 coding downstream 114188 10059991 ~ 10062998 (-)
rnf41 rnf41,LOC107723732,LOC107756409 coding upstream 1232 10204039 ~ 10212427 (-)
LOC122328770 pifo coding upstream 41121 10243928 ~ 10280539 (-)
LOC122328780 NA coding upstream 140443 10343250 ~ 10346092 (-)
LOC122328599 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding upstream 229957 10432764 ~ 10447218 (-)
LOC122329230 dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding upstream 246678 10449485 ~ 10456918 (-)
G156313 NA non-coding downstream 60231 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 117883 10058011 ~ 10059303 (-)
G156278 NA non-coding downstream 123637 10052526 ~ 10053549 (-)
G156264 NA non-coding downstream 159765 10016456 ~ 10017421 (-)
G156261 NA non-coding downstream 225155 9951143 ~ 9952031 (-)
LOC122328389 NA non-coding upstream 88658 10291465 ~ 10294043 (-)
G156341 NA non-coding upstream 145334 10348141 ~ 10351881 (-)
G156364 NA non-coding upstream 184147 10386954 ~ 10388615 (-)
G156452 NA non-coding upstream 338092 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 465150 10667957 ~ 10675579 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 343504 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 368817 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 967222 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 1079884 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 1250435 8921564 ~ 8926751 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other upstream 15666 10218473 ~ 10385967 (-)
LOC122329224 NA other upstream 153134 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 161098 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 472873 10675680 ~ 10678150 (-)
G156746 NA other upstream 897937 11100744 ~ 11105223 (-)

Expression


Co-expression Network