tpx2


Basic Information

Item Value
gene id tpx2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10092768 ~ 10098638 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224481.1
ccctctgattggctgattcaTAAACGCAGTTCTAACGGCACCAACATTCAAACTAGCATTCTTGCCTGGTTGTTTGTGGAGGAGGGTACGTGTGTCTGTTGGTTCAAGTTTTAGCGGAATTTTCAGGTTGTTATAGGAgccattgttttacaatAAGACTCCGGAGTGAATATGGAAGGGTGCTCTGCTGATGCGTATACCTGGGATGCCCCTTCTCATGTTATAGAGTCTATTGATGATTTTGCATTGGATCCTCAGGATAATGCTGACCAGTGGTTTGAGTTGAAGGCAGCTCCTACAGATGGCATTGTGGAGCAGCTCACCACCCCTTTACGGACACATCCTTTTGATGAAACCCATGATACAGACAGAATTAAAGCTCTATCTCTTATCAAAAAAGATGAGGAGACAAGCTCAGAAGTCCAAGAAAGCACCTCAGCCGAGGTCCCATCTAACATAGTCACATCATGGGGAAATGGCAGAACTACTGCAGCTCCTGCTCAGGGCCAGACATCTCAACCACCTGGAGTGTCCAAACGGCCTGCACCTGGAAATGCAAGGCCTACAACACCACCTCTTGTCAAGAAAAGACGACTAAGCTCAACAGGAGTTGTGCGACGCAGTGGTGCTGGTGCGAGGAGTAGTGTTCGGCTGAGAAAGAAATCAGCCATTGCTTCAAAGGCCTCAAATACTGCTTCTGCCTCCAACATACAACCGAAAAGCACAGAACAGCAAGAGTTGGAGCGCATTGAGGCTTTACAGAAAGAGGTGGCAGAACAGCGGCGTAAGAACGAGGCGAGCTACAGGGCTGCACTGGCAGGCAGTCAGCCTCCTAAGAAACATGTGCTCTCCACCACAATTCCCAAAGAATTTAATTTCCACTCGGATAGCAAGTTGAAGAACCACACGGATGGAGGTTCTGCAGTTGACAACTCTTACAAAGAGATGGATTTCACCTCTCAGCTCCGCAAGCACCCATCTTCCCATCTGAAGGCTCCAAAGGGAACAACCATTCCCAAGCCCTTCAACCTTTCCAGAGGAAAGAGGAAGCTTGATGAGACGGTAGCCTACGTGCCAATGGCCCAACAGATTGAACAGTTTCAGAAACTCACTCCCACTCGCTATCATCTGCGTAGTAGGCAGAGCCAGGCAAGAGggCCTTCACCAGTGAAGGCTGACAAGCTAAAAATCACATACCCCAAAACACCACAGCTAATGACTAGCCAGAGACATCGTCCCACAATGGTGAAAAGCACCGCAGAAATTGAAGCAGAGGAAATACAGCAGTTTAAGTTCAAACCTCTAGAACTCAACAGAAAGATTCTAGAAGGAGCTTTGGTTCCTAAAAAGCCGGATAGCAAAGAAGTTACCAAGCCTGAGGGTTTCCAGCTGGAGATTGAGAAGCGACTTCAGGAGAGGCAGGCAAGTAAGAAGCCCGAGGTAGAAGAGGACAACTCGTTCCATCCCAGACCTCTGCCAACTCGAATTCTGAAGGAAGTTGTGGGTGTCCCTGAGAAGAAGGTTCTGAATCCTACTGTTCCAGTATCGCCAGCATTTGCTCTTAAAAAACGTGTGaaaatggaaaggaaaaaagaagagGAGAAGCCTCCTGCTCCAATTAAGGCACTTGCTATGCCCCACTTCCTACCCTTTCAGCCCAAACTGCCAGTCAAGAGCCAGGTAGAAATGTGCCCTTTCTCATTTGAGGAACGGGATCGTGAACGTAGAGAAATTAAGGAGAAGAAACTGgaagaaatgagaaatgaggagGTATTTAAGTTTAAGGCCCAACTCCTTCCTGACTTCCATGAAGTGCACCTTCCTGATGTAAAGAGAATAGAGCCCACCAAACCTGCTCCTTTCAAGCTGAAGGTTGATGAACGAGGAGCTGCAAAGAGTGAACGCTGGGAGCAGATGATAAAGGAGGAGTTAAAACAACAGGCCGAAGCAGCGTGTTTTAAGGCACAACCAAACAATGTAACGCACAAAGAACCATTTGTACCGAAAAAGGATAATCGCTCCATCTTGGCCAATACTACTAATTCTTCAGTTCCTGAGGGATTCCAGTTGGCCACAGAACAGAGAGCCAAGGAACGTATGGAGTTTGAAAAGGAGTTAAGTGAGAAGGAGGCGCAGAGGGTCCGTGTTCAGGCACAGTGGGCAAGAGAGCGAGAGGAGCAGGAAAAAGAGGAGATTGCAAGGCTGCGACAGGAACAGGTGCGCAAGGCCCAGCCAATCAGACAGTACAAGCCACTGGAGTTGAAAAAGAGTGACGTGCCTCTTACAGTGCCCCAGTCTCCAAAGTTTTCAAATCGTTTCCGCTTTTAAATGCGTAATACAATTACGTTGACTAAACTGTAcatagttttaatgtttttggtcTTTCATGTCTCTCTATGATGTCTAAACATTTGAGTAGTTTTTATCCATCTCTGGCTGATGCATTAAGCCTTTGTGGTCAAGTAAAAAATTTTACAGTTGGATTTTGACTGCCCCagctaatttgttttatttcttcttacTTTTGTATAtgactttgtttttctgttcctTTCTTTTGAGACTTCTTCaataaaggacatttttttttagtgcaaaA
>XM_043224482.1
ACATTCAAACTAGCATTCTTGCCTGGTTGTTTGTGGAGGAGGGTACGTGTGTCTGTTGGTTCAAGTTTTAGCGGAATTTTCAGGTTGTTATAGGAgccattgttttacaatACTCCGGAGTGAATATGGAAGGGTGCTCTGCTGATGCGTATACCTGGGATGCCCCTTCTCATGTTATAGAGTCTATTGATGATTTTGCATTGGATCCTCAGGATAATGCTGACCAGTGGTTTGAGTTGAAGGCAGCTCCTACAGATGGCATTGTGGAGCAGCTCACCACCCCTTTACGGACACATCCTTTTGATGAAACCCATGATACAGACAGAATTAAAGCTCTATCTCTTATCAAAAAAGATGAGGAGACAAGCTCAGAAGTCCAAGAAAGCACCTCAGCCGAGGTCCCATCTAACATAGTCACATCATGGGGAAATGGCAGAACTACTGCAGCTCCTGCTCAGGGCCAGACATCTCAACCACCTGGAGTGTCCAAACGGCCTGCACCTGGAAATGCAAGGCCTACAACACCACCTCTTGTCAAGAAAAGACGACTAAGCTCAACAGGAGTTGTGCGACGCAGTGGTGCTGGTGCGAGGAGTAGTGTTCGGCTGAGAAAGAAATCAGCCATTGCTTCAAAGGCCTCAAATACTGCTTCTGCCTCCAACATACAACCGAAAAGCACAGAACAGCAAGAGTTGGAGCGCATTGAGGCTTTACAGAAAGAGGTGGCAGAACAGCGGCGTAAGAACGAGGCGAGCTACAGGGCTGCACTGGCAGGCAGTCAGCCTCCTAAGAAACATGTGCTCTCCACCACAATTCCCAAAGAATTTAATTTCCACTCGGATAGCAAGTTGAAGAACCACACGGATGGAGGTTCTGCAGTTGACAACTCTTACAAAGAGATGGATTTCACCTCTCAGCTCCGCAAGCACCCATCTTCCCATCTGAAGGCTCCAAAGGGAACAACCATTCCCAAGCCCTTCAACCTTTCCAGAGGAAAGAGGAAGCTTGATGAGACGGTAGCCTACGTGCCAATGGCCCAACAGATTGAACAGTTTCAGAAACTCACTCCCACTCGCTATCATCTGCGTAGTAGGCAGAGCCAGGCAAGAGggCCTTCACCAGTGAAGGCTGACAAGCTAAAAATCACATACCCCAAAACACCACAGCTAATGACTAGCCAGAGACATCGTCCCACAATGGTGAAAAGCACCGCAGAAATTGAAGCAGAGGAAATACAGCAGTTTAAGTTCAAACCTCTAGAACTCAACAGAAAGATTCTAGAAGGAGCTTTGGTTCCTAAAAAGCCGGATAGCAAAGAAGTTACCAAGCCTGAGGGTTTCCAGCTGGAGATTGAGAAGCGACTTCAGGAGAGGCAGGCAAGTAAGAAGCCCGAGGTAGAAGAGGACAACTCGTTCCATCCCAGACCTCTGCCAACTCGAATTCTGAAGGAAGTTGTGGGTGTCCCTGAGAAGAAGGTTCTGAATCCTACTGTTCCAGTATCGCCAGCATTTGCTCTTAAAAAACGTGTGaaaatggaaaggaaaaaagaagagGAGAAGCCTCCTGCTCCAATTAAGGCACTTGCTATGCCCCACTTCCTACCCTTTCAGCCCAAACTGCCAGTCAAGAGCCAGGTAGAAATGTGCCCTTTCTCATTTGAGGAACGGGATCGTGAACGTAGAGAAATTAAGGAGAAGAAACTGgaagaaatgagaaatgaggagGTATTTAAGTTTAAGGCCCAACTCCTTCCTGACTTCCATGAAGTGCACCTTCCTGATGTAAAGAGAATAGAGCCCACCAAACCTGCTCCTTTCAAGCTGAAGGTTGATGAACGAGGAGCTGCAAAGAGTGAACGCTGGGAGCAGATGATAAAGGAGGAGTTAAAACAACAGGCCGAAGCAGCGTGTTTTAAGGCACAACCAAACAATGTAACGCACAAAGAACCATTTGTACCGAAAAAGGATAATCGCTCCATCTTGGCCAATACTACTAATTCTTCAGTTCCTGAGGGATTCCAGTTGGCCACAGAACAGAGAGCCAAGGAACGTATGGAGTTTGAAAAGGAGTTAAGTGAGAAGGAGGCGCAGAGGGTCCGTGTTCAGGCACAGTGGGCAAGAGAGCGAGAGGAGCAGGAAAAAGAGGAGATTGCAAGGCTGCGACAGGAACAGGTGCGCAAGGCCCAGCCAATCAGACAGTACAAGCCACTGGAGTTGAAAAAGAGTGACGTGCCTCTTACAGTGCCCCAGTCTCCAAAGTTTTCAAATCGTTTCCGCTTTTAAATGCGTAATACAATTACGTTGACTAAACTGTAcatagttttaatgtttttggtcTTTCATGTCTCTCTATGATGTCTAAACATTTGAGTAGTTTTTATCCATCTCTGGCTGATGCATTAAGCCTTTGTGGTCAAGTAAAAAATTTTACAGTTGGATTTTGACTGCCCCagctaatttgttttatttcttcttacTTTTGTATAtgactttgtttttctgttcctTTCTTTTGAGACTTCTTCaataaaggacatttttttttagtgcaaaA
>XM_043224483.1
ccctctgattggctgattcaTAAACGCAGTTCTAACGGCACCAACATTCAAACTAGCATTCTTGCCTGGTTGTTTGTGGAGGAGGGTACGTGTGTCTGTTGGTTCAAGTTTTAGCGGAATTTTCAGGTTGTTATAGGAgccattgttttacaatAAGACTCCGGAGTGAATATGGAAGGGTGCTCTGCTGATGCGTATACCTGGGATGCCCCTTCTCATGTTATAGAGTCTATTGATGATTTTGCATTGGATCCTCAGGATAATGCTGACCAGTGGTTTGAGTTGAAGGCAGCTCCTACAGATGGCATTGTGGAGCAGCTCACCACCCCTTTACGGACACATCCTTTTGATGAAACCCATGATACAGACAGAATTAAAGCTCTATCTCTTATCAAAAAAGATGAGGAGACAAGCTCAGAAGTCCAAGAAAGCACCTCAGCCGAGGTCCCATCTAACATAGTCACATCATGGGGAAATGGCAGAACTACTGCAGCTCCTGCTCAGGGCCAGACATCTCAACCACCTGGAGTGTCCAAACGGCCTGCACCTGGAAATGCAAGGCCTACAACACCACCTCTTGTCAAGAAAAGACGACTAAGCTCAACAGGAGTTGTGCGACGCAGTGGTGCTGGTGCGAGGAGTAGTGTTCGGCTGAGAAAGAAATCAGCCATTGCTTCAAAGGCCTCAAATACTGCTTCTGCCTCCAACATACAACCGAAAAGCACAGAACAGCAAGAGTTGGAGCGCATTGAGGCTTTACAGAAAGAGGTGGCAGAACAGCGGCGTAAGAACGAGGCGAGCTACAGGGCTGCACTGGCAGGCAGTCAGCCTCCTAAGAAACATGTGCTCTCCACCACAATTCCCAAAGAATTTAATTTCCACTCGGATAGCAAGTTGAAGAACCACACGGATGGAGGTTCTGCAGTTGACAACTCTTACAAAGAGATGGATTTCACCTCTCAGCTCCGCAAGCACCCATCTTCCCATCTGAAGGCTCCAAAGGGAACAACCATTCCCAAGCCCTTCAACCTTTCCAGAGGAAAGAGGAAGCTTGATGAGACGGTAGCCTACGTGCCAATGGCCCAACAGATTGAACAGTTTCAGAAACTCACTCCCACTCGCTATCATCTGCGTAGTAGGCAGAGCCAGGCAAGAGggCCTTCACCAGTGAAGGCTGACAAGCTAAAAATCACATACCCCAAAACACCACAGCTAATGACTAGCCAGAGACATCGTCCCACAATGGTGAAAAGCACCGCAGAAATTGAAGCAGAGGAAATACAGCAGTTTAAGTTCAAACCTCTAGAACTCAACAGAAAGATTCTAGAAGGAGCTTTGGTTCCTAAAAAGCCGGATAGCAAAGAAGTTACCAAGCCTGAGGGTTTCCAGCTGGAGATTGAGAAGCGACTTCAGGAGAGGCAGGCAAGTAAGAAGCCCGAGGTAGAAGAGGACAACTCGTTCCATCCCAGACCTCTGCCAACTCGAATTCTGAAGGAAGTTGTGGGTGTCCCTGAGAAGAAGGTTCTGAATCCTACTGTTCCAGTATCGCCAGCATTTGCTCTTAAAAAACGTGTGaaaatggaaaggaaaaaagaagagGAGAAGCCTCCTGCTCCAATTAAGGCACTTGCTATGCCCCACTTCCTACCCTTTCAGCCCAAACTGCCAGTCAAGAGCCAGGTAGAAATGTGCCCTTTCTCATTTGAGGAACGGGATCGTGAACGTAGAGAAATTAAGGAGAAGAAACTGgaagaaatgagaaatgaggagGTATTTAAGTTTAAGGCCCAACTCCTTCCTGACTTCCATGAAGTGCACCTTCCTGATGTAAAGAGAATAGAGCCCACCAAACCTGCTCCTTTCAAGCTGAAGGTTGATGAACGAGGAGCTGCAAAGAGTGAACGCTGGGAGCAGATGATAAAGGAGGAGTTAAAACAACAGGCCGAAGCAGCGTGTTTTAAGGCACAACCAAACAATGTAACGCACAAAGAACCATTTGTACCGAAAAAGGATAATCGCTCCATCTTGGTTCCTGAGGGATTCCAGTTGGCCACAGAACAGAGAGCCAAGGAACGTATGGAGTTTGAAAAGGAGTTAAGTGAGAAGGAGGCGCAGAGGGTCCGTGTTCAGGCACAGTGGGCAAGAGAGCGAGAGGAGCAGGAAAAAGAGGAGATTGCAAGGCTGCGACAGGAACAGGTGCGCAAGGCCCAGCCAATCAGACAGTACAAGCCACTGGAGTTGAAAAAGAGTGACGTGCCTCTTACAGTGCCCCAGTCTCCAAAGTTTTCAAATCGTTTCCGCTTTTAAATGCGTAATACAATTACGTTGACTAAACTGTAcatagttttaatgtttttggtcTTTCATGTCTCTCTATGATGTCTAAACATTTGAGTAGTTTTTATCCATCTCTGGCTGATGCATTAAGCCTTTGTGGTCAAGTAAAAAATTTTACAGTTGGATTTTGACTGCCCCagctaatttgttttatttcttcttacTTTTGTATAtgactttgtttttctgttcctTTCTTTTGAGACTTCTTCaataaaggacatttttttttagtgcaaaA

Function

NR:

description
targeting protein for Xklp2-like isoform X1

GO: NA

KEGG:

id description
K16812 TPX2; targeting protein for Xklp2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224481.1 True 2599 mRNA 0.46 17 10092768 10098638
XM_043224482.1 False 2553 mRNA 0.46 17 10092811 10098638
XM_043224483.1 False 2578 mRNA 0.46 17 10092768 10098638

Neighbor

gene id symbol gene type direction distance location
trappc6b trappc6b,LOC107572779,LOC107756365,LOC107701709,LOC107549033 coding upstream 316 10090427 ~ 10092452 (+)
pan2 pan2,LOC107723747,LOC107756401 coding upstream 10209 10067453 ~ 10082559 (+)
nemp1 LOC107756399,LOC107701744,LOC107549035,LOC107671884,LOC107572777 coding upstream 35295 10053646 ~ 10057473 (+)
si:dkey-126g1.9 LOC107549036,LOC107723751,LOC107756364,LOC107572772 coding upstream 39310 10049940 ~ 10053458 (+)
armc1l armc1l,LOC107723767,LOC107671895,LOC107571378,LOC107701743,LOC107756398,LOC107549053 coding upstream 51415 10037867 ~ 10041353 (+)
mylk2 LOC107671840,LOC107756349,LOC107701711,LOC105903258,LOC107572773,LOC107549024 coding downstream 427 10099065 ~ 10106692 (+)
cd63 LOC107723742,LOC107671882,LOC107572785,LOC107701749,LOC107756350,LOC107549048 coding downstream 9655 10108293 ~ 10116956 (+)
zgc:56699 zgc:56699,LOC107671838,LOC107756366,LOC107701712,LOC107549049 coding downstream 23110 10121748 ~ 10124211 (+)
slc39a5 slc39a5,LOC107723731,LOC107549043,LOC107756408 coding downstream 114205 10212843 ~ 10217601 (+)
taf8 taf8,LOC107723763,LOC107549030,LOC107756368,LOC107671856,LOC107594013,LOC107701755 coding downstream 141673 10240311 ~ 10243841 (+)
G156142 NA non-coding upstream 98115 9994446 ~ 9994653 (+)
G156109 NA non-coding upstream 119234 9880762 ~ 9973534 (+)
G156108 sgk1 non-coding upstream 169543 9922141 ~ 9923225 (+)
LOC122328703 NA non-coding upstream 204389 9885045 ~ 9888379 (+)
G156098 NA non-coding upstream 277459 9813217 ~ 9815309 (+)
G156168 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 non-coding downstream 36217 10134855 ~ 10145461 (+)
G156182 grasp,LOC107671830,LOC107723769,LOC107594022,LOC107549045 non-coding downstream 63360 10161998 ~ 10163976 (+)
LOC122328771 NA non-coding downstream 156148 10254786 ~ 10256406 (+)
G156217 NA non-coding downstream 165352 10263990 ~ 10346054 (+)
G156169 NA non-coding downstream 288322 10386960 ~ 10387500 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other upstream 2950 10070780 ~ 10089818 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other upstream 323148 9683746 ~ 9769620 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other upstream 970375 9120884 ~ 9122393 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other upstream 991396 8941031 ~ 9101372 (+)
G155799 NA other upstream 1604127 8488086 ~ 8488641 (+)
LOC122328781 pifo other downstream 231213 10329851 ~ 10363818 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other downstream 317025 10415663 ~ 10427162 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other downstream 416341 10514979 ~ 10518751 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 452459 10551097 ~ 10554720 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other downstream 464706 10563344 ~ 10572246 (+)

Expression


Co-expression Network